Author results

1X02
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SOLUTION STRUCTURE OF STEREO ARRAY ISOTOPE LABELED (SAIL) CALMODULIN
Descriptor:calmodulin, CALCIUM ION
Authors:Kainosho, M., Torizawa, T., Terauchi, T., Ono, A.M., Guntert, P.
Deposit date:2005-03-11
Release date:2006-03-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Optimal isotope labelling for NMR protein structure determinations.
Nature, 440, 2006
2D21
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NMR STRUCTURE OF STEREO-ARRAY ISOTOPE LABELLED (SAIL) MALTODEXTRIN-BINDING PROTEIN (MBP)
Descriptor:Maltose-binding periplasmic protein
Authors:Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A.M., Guntert, P.
Deposit date:2005-09-02
Release date:2006-03-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Optimal isotope labelling for NMR protein structure determinations.
Nature, 440, 2006
2JZ4
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PUTATIVE 32 KDA MYROSINASE BINDING PROTEIN AT3G16450.1 FROM ARABIDOPSIS THALIANA
Descriptor:Jasmonate inducible protein isolog
Authors:Takeda, N., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A.M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Guntert, P., Aceti, D.J., Markley, J.L., Kainosho, M., Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-12-28
Release date:2008-02-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the putative 32 kDa myrosinase-binding protein from Arabidopsis (At3g16450.1) determined by SAIL-NMR.
Febs J., 275, 2008
1BHU
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THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:METALLOPROTEINASE INHIBITOR
Authors:Tate, S., Ohno, A., Seeram, S.S., Hiraga, K., Oda, K., Kainosho, M.
Deposit date:1998-06-10
Release date:1999-01-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: another example of an ancestral beta gamma-crystallin precursor structure.
J.Mol.Biol., 282, 1998
1C4L
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SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE-PAIR
Descriptor:RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3'), RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3')
Authors:Tanaka, Y., Kojima, C., Yamazaki, T., Kodama, T.S., Yasuno, K., Miyashita, S., Ono, A.M., Ono, A.S., Kainosho, M., Kyogoku, Y.
Deposit date:1999-08-30
Release date:2000-08-09
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of an RNA duplex including a C-U base pair.
Biochemistry, 39, 2000
1BXD
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NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ
Descriptor:PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ)), PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Tanaka, T., Saha, S.K., Tomomori, C., Ishima, R., Liu, D., Tong, K.I., Park, H., Dutta, R., Qin, L., Swindells, M.B., Yamazaki, T., Ono, A.M., Kainosho, M., Inouye, M., Ikura, M.
Deposit date:1998-10-02
Release date:1999-10-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
1IQ5
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CALMODULIN/NEMATODE CA2+/CALMODULIN DEPENDENT KINASE KINASE FRAGMENT
Descriptor:CALMODULIN, CA2+/CALMODULIN DEPENDENT KINASE KINASE, CALCIUM ION
Authors:Kurokawa, H., Osawa, M., Kurihara, H., Katayama, N., Tokumitsu, H., Swindells, M.B., Kainosho, M., Ikura, M.
Deposit date:2001-06-14
Release date:2001-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Target-induced conformational adaptation of calmodulin revealed by the crystal structure of a complex with nematode Ca(2+)/calmodulin-dependent kinase kinase peptide
J.Mol.Biol., 312, 2001
1J2M
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SOLUTION STRUCTURE OF CPI-17(22-120)
Descriptor:17-kDa PKC-potentiated inhibitory protein of PP1
Authors:Ohki, S., Eto, M., Takada, R., Shimizu, M., Brautigan, D.L., Kainosho, M.
Deposit date:2003-01-07
Release date:2003-06-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Distinctive Solution Conformation of Phosphatase Inhibitor CPI-17 Substituted with Aspartate at the Phosphorylation-site Threonine Residue
J.Mol.Biol., 326, 2003
1J2N
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SOLUTION STRUCTURE OF CPI-17(22-120) T38D
Descriptor:17-kDa PKC-potentiated inhibitory protein of PP1
Authors:Ohki, S., Eto, M., Shimizu, M., Takada, R., Brautigan, D.L., Kainosho, M.
Deposit date:2003-01-07
Release date:2003-06-17
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Distinctive Solution Conformation of Phosphatase Inhibitor CPI-17 Substituted with Aspartate at the Phosphorylation-site Threonine Residue
J.Mol.Biol., 326, 2003
1K5O
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CPI-17(35-120) DELETION MUTANT
Descriptor:CPI-17
Authors:Ohki, S., Eto, M., Kariya, E., Hayano, T., Hayashi, Y., Yazawa, M., Brautigan, D., Kainosho, M.
Deposit date:2001-10-11
Release date:2002-10-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution NMR Structure of the Myosin Phosphatase Inhibitor Protein CPI-17 Shows Phosphorylation-induced Conformational Changes Responsible for Activation
J.Mol.Biol., 314, 2001
1MG8
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NMR STRUCTURE OF UBIQUITIN-LIKE DOMAIN IN MURINE PARKIN
Descriptor:Parkin
Authors:Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S., Shindo, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-08-15
Release date:2003-04-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease.
J.Biomol.NMR, 25, 2003
2JW8
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SOLUTION STRUCTURE OF STEREO-ARRAY ISOTOPE LABELLED (SAIL) C-TERMINAL DIMERIZATION DOMAIN OF SARS CORONAVIRUS NUCLEOCAPSID PROTEIN
Descriptor:Nucleocapsid protein
Authors:Takeda, M., Chang, C., Ikeya, T., Guntert, P., Chang, Y., Hsu, Y., Huang, T., Kainosho, M.
Deposit date:2007-10-06
Release date:2008-08-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the c-terminal dimerization domain of SARS coronavirus nucleocapsid protein solved by the SAIL-NMR method
J.Mol.Biol., 380, 2008
2L6X
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SOLUTION NMR STRUCTURE OF PROTEORHODOPSIN.
Descriptor:Green-light absorbing proteorhodopsin, RETINAL
Authors:Reckel, S., Gottstein, D., Stehle, J., Loehr, F., Takeda, M., Silvers, R., Kainosho, M., Glaubitz, C., Bernhard, F., Schwalbe, H., Guntert, P., Doetsch, V., Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2010-11-29
Release date:2011-11-09
Last modified:2015-06-17
Method:SOLUTION NMR
Cite:Solution NMR structure of proteorhodopsin.
Angew.Chem.Int.Ed.Engl., 50, 2011
2RS4
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NMR STRUCTURE OF STEREO-ARRAY ISOTOPE LABELLED (SAIL) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM E. COLI (EPPIB)
Descriptor:Peptidyl-prolyl cis-trans isomerase B
Authors:Takeda, M., Jee, J., Ono, A.M., Okuma, K., Terauchi, T., Kainosho, M.
Deposit date:2011-07-16
Release date:2011-10-12
Last modified:2016-12-21
Method:SOLUTION NMR
Cite:Hydrogen exchange study on the hydroxyl groups of serine and threonine residues in proteins and structure refinement using NOE restraints with polar side-chain groups
J.Am.Chem.Soc., 133, 2011
1CYU
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SOLUTION NMR STRUCTURE OF RECOMBINANT HUMAN CYSTATIN A UNDER THE CONDITION OF PH 3.8 AND 310K
Descriptor:CYSTATIN A
Authors:Tate, S., Tate, N.U., Ushioda, T., Samejima, T., Kainosho, M.
Deposit date:1995-08-24
Release date:1995-12-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a human cystatin A variant, cystatin A2-98 M65L, by NMR spectroscopy. A possible role of the interactions between the N- and C-termini to maintain the inhibitory active form of cystatin A.
Biochemistry, 34, 1995
1CYV
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SOLUTION NMR STRUCTURE OF RECOMBINANT HUMAN CYSTATIN A UNDER THE CONDITION OF PH 3.8 AND 310K
Descriptor:CYSTATIN A
Authors:Tate, S., Tate, N.U., Ushioda, T., Samejima, T., Kainosho, M.
Deposit date:1995-08-24
Release date:1995-12-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a human cystatin A variant, cystatin A2-98 M65L, by NMR spectroscopy. A possible role of the interactions between the N- and C-termini to maintain the inhibitory active form of cystatin A.
Biochemistry, 34, 1995
1DUF
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THE NMR STRUCTURE OF DNA DODECAMER DETERMINED IN AQUEOUS DILUTE LIQUID CRYSTALLINE PHASE
Descriptor:DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Tjandra, N., Tate, S., Ono, A., Kainosho, M., Bax, A.
Deposit date:2000-01-17
Release date:2000-07-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The NMR Structure of a DNA Dodecamer in an Aqueous Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 122, 2000
1F53
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NMR STRUCTURE OF KILLER TOXIN-LIKE PROTEIN SKLP
Descriptor:YEAST KILLER TOXIN-LIKE PROTEIN
Authors:Ohki, S., Kariya, E., Hiraga, K., Wakamiya, A., Isobe, T., Oda, K., Kainosho, M.
Deposit date:2000-06-12
Release date:2000-12-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of Streptomyces killer toxin-like protein, SKLP: further evidence for the wide distribution of single-domain betagamma-crystallin superfamily proteins.
J.Mol.Biol., 305, 2001
1GD3
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REFINED SOLUTION STRUCTURE OF HUMAN CYSTATIN A
Descriptor:CYSTATIN A
Authors:Shimba, N., Kariya, E., Tate, S., Kaji, H., Kainosho, M.
Deposit date:2000-09-08
Release date:2001-09-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the a-helix conformation ?
J.STRUCT.FUNCT.GENOM., 1, 2000
1GD4
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SOLUTION STRUCTURE OF P25S CYSTATIN A
Descriptor:CYSTATIN A
Authors:Shimba, N., Kariya, E., Tate, S., Kaji, H., Kainosho, M.
Deposit date:2000-09-08
Release date:2001-09-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural comparison between wild-type and P25S human cystatin A by NMR spectroscopy. Does this mutation affect the a-helix conformation ?
J.STRUCT.FUNCT.GENOM., 1, 2000
1JO7
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SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER
Descriptor:Influenza A virus promoter RNA
Authors:Bae, S.-H., Cheong, H.-K., Lee, J.-H., Cheong, C., Kainosho, M., Choi, B.-S.
Deposit date:2001-07-27
Release date:2001-09-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
Proc.Natl.Acad.Sci.USA, 98, 2001
2BA3
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NMR STRUCTURE OF NIKA N-TERMINAL FRAGMENT
Descriptor:NikA
Authors:Yoshida, H., Furuya, N., Lin, Y.J., Guntert, P., Komano, T., Kainosho, M.
Deposit date:2005-10-14
Release date:2006-10-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR Structure of NikA N-teminal Fragment
To be Published
3VVI
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CRYSTAL STRUCTURE OF THE COILED-COIL DOMAIN OF THE TRANSIENT RECEPTOR POTENTIAL CHANNEL FROM GIBBERELLA ZEAE (TRPGZ)
Descriptor:Non selective cation channel homologous to TRP channel, ACETATE ION
Authors:Ihara, M., Yamashita, A.
Deposit date:2012-07-25
Release date:2013-04-10
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular bases of multimodal regulation of a fungal transient receptor potential (TRP) channel
J.Biol.Chem., 288, 2013
5NJJ
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PTB DOMAIN OF HUMAN NUMB ISOFORM-1
Descriptor:Protein numb homolog, ALA-TYR-ILE-GLY-PRO-PTR-LEU, SULFATE ION
Authors:Mapelli, M., Di Fiore, P.P.
Deposit date:2017-03-29
Release date:2017-12-13
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Numb-Mdm2 fuzzy complex reveals an isoform-specific involvement of Numb in breast cancer.
J. Cell Biol., 217, 2018
5NJK
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PTB DOMAIN OF HUMAN NUMB ISOFORM-1
Descriptor:Protein numb homolog, ALA-TYR-ILE-GLY-PRO-PTR-LEU, SULFATE ION
Authors:Mapelli, M., Di Fiore, P.P.
Deposit date:2017-03-29
Release date:2017-12-13
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:A Numb-Mdm2 fuzzy complex reveals an isoform-specific involvement of Numb in breast cancer.
J. Cell Biol., 217, 2018
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