Author results

2RQG
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STRUCTURE OF GSPT1/ERF3A-PABC
Descriptor:G1 to S phase transition 1, Polyadenylate-binding protein 1
Authors:Osawa, M., Nakanishi, T., Hosoda, N., Uchida, S., Hoshino, T., Katada, I., Shimada, I.
Deposit date:2009-05-08
Release date:2010-05-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Eukaryotic Translation Termination Factor Gspt/Erf3 Recognizes Pabp with Chemical Exchange Using Two Overlapping Motifs
To be Published
2RQH
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STRUCTURE OF GSPT1/ERF3A-PABC
Descriptor:G1 to S phase transition 1, Polyadenylate-binding protein 1
Authors:Osawa, M., Nakanishi, T., Hosoda, N., Uchida, S., Hoshino, T., Katada, I., Shimada, I.
Deposit date:2009-05-08
Release date:2010-05-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Eukaryotic Translation Termination Factor Gspt/Erf3 Recognizes Pabp with Chemical Exchange Using Two Overlapping Motifs
To be Published
4YYL
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PHENOLIC ACID DERIVATIVE BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE SUBUNIT PA ENDONUCLEASE
Descriptor:Polymerase acidic protein, 2-(4-fluorophenoxy)-1-(2,3,4-trihydroxyphenyl)ethanone, MANGANESE (II) ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Neya, S., Hoshino, T.
Deposit date:2015-03-24
Release date:2015-04-29
Last modified:2015-09-09
Method:X-RAY DIFFRACTION (1.905 Å)
Cite:Structural and computational study on inhibitory compounds for endonuclease activity of influenza virus polymerase
Bioorg.Med.Chem., 23, 2015
4ZHZ
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ENDONUCLEASE INHIBITOR BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION WITH EXPELLING ONE OF THE METAL IONS IN THE ACTIVE SITE
Descriptor:Polymerase acidic protein, 5-(2-chlorobenzyl)-2-hydroxy-3-nitrobenzaldehyde, MANGANESE (II) ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Neya, S., Hoshino, T.
Deposit date:2015-04-27
Release date:2015-05-13
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
Biochemistry, 55, 2016
4ZI0
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ENDONUCLEASE INHIBITOR BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION WITHOUT A CHELATION TO THE METAL IONS IN THE ACTIVE SITE
Descriptor:Polymerase acidic protein, SULFATE ION, MANGANESE (II) ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Neya, S., Hoshino, T.
Deposit date:2015-04-27
Release date:2015-05-13
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
Biochemistry, 55, 2016
4ZQQ
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APO FORM OF INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION
Descriptor:Polymerase acidic protein,Polymerase acidic protein, MANGANESE (II) ION, SULFATE ION
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Neya, S., Hoshino, T.
Deposit date:2015-05-11
Release date:2015-06-03
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit.
Biochemistry, 55, 2016
5FDD
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ENDONUCLEASE INHIBITOR 1 BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION AT PH 7.0
Descriptor:Polymerase acidic protein,Polymerase acidic protein, 5-(2-chlorobenzyl)-2-hydroxy-3-nitrobenzaldehyde, MANGANESE (II) ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Hoshino, T.
Deposit date:2015-12-16
Release date:2015-12-30
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
Biochemistry, 55, 2016
5FDG
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ENDONUCLEASE INHIBITOR 3 BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION AT PH 7.0
Descriptor:Polymerase acidic protein, SULFATE ION, MANGANESE (II) ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Hoshino, T.
Deposit date:2015-12-16
Release date:2015-12-30
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
Biochemistry, 55, 2016
5I13
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ENDONUCLEASE INHIBITOR 2 BOUND TO INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION AT PH 7.0
Descriptor:Polymerase acidic protein, MANGANESE (II) ION, SULFATE ION, ...
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Hoshino, T.
Deposit date:2016-02-05
Release date:2016-02-17
Last modified:2016-05-25
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit
Biochemistry, 55, 2016
5ZXW
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CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II CRYSTALLIZED BY AMMONIUM SULFATE
Descriptor:Carbonic anhydrase 2, ZINC ION, SULFATE ION
Authors:Kitahara, M., Fudo, S., Yoneda, T., Nukaga, M., Hoshino, T.
Deposit date:2018-05-22
Release date:2018-06-13
Method:X-RAY DIFFRACTION (1.316 Å)
Cite:Formation of chain-like arrays of ammonium sulfate ions in protein crystalliation
To be published
5ZZE
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CRYSTAL STRUCTURE OF HORSE MYOGLOBIN CRYSTALLIZED BY AMMONIUM SULFATE
Descriptor:Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kitahara, M., Fudo, S., Yoneda, T., Nukaga, M., Hoshino, T.
Deposit date:2018-06-01
Release date:2019-02-20
Method:X-RAY DIFFRACTION (1.423 Å)
Cite:Formation of chain-like arrays of ammonium sulfate ions in protein crystalliation
To be published
6A10
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CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME CRYSTALLIZED BY AMMONIUM SULFATE
Descriptor:Lysozyme C, SULFATE ION
Authors:Kitahara, M., Fudo, S., Yoneda, T., Nukaga, M., Hoshino, T.
Deposit date:2018-06-06
Release date:2019-02-20
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Formation of chain-like arrays of ammonium sulfate ions in protein crystalliation
To be published
6JE7
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CRYSTAL STRUCTURE OF HUMAN SERUM ALBUMIN CRYSTALLIZED BY AMMONIUM SULFATE
Descriptor:Serum albumin
Authors:Kitahara, M., Fudo, S., Yoneda, T., Nukaga, M., Hoshino, T.
Deposit date:2019-02-04
Release date:2019-03-27
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Anisotropic Distribution of Ammonium Sulfate Ions in Protein Crystallization
To be published
5JHT
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APO FORM OF INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION CRYSTALLIZED WITH POTASSIUM SODIUM TARTRATE
Descriptor:Polymerase acidic protein, MANGANESE (II) ION, L(+)-TARTARIC ACID
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Hoshino, T.
Deposit date:2016-04-21
Release date:2016-05-11
Last modified:2017-03-01
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Influence of Precipitants on Molecular Arrangements and Space Groups of Protein Crystals
Cryst.Growth Des., 17, 2017
5JHV
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APO FORM OF INFLUENZA STRAIN H1N1 POLYMERASE ACIDIC SUBUNIT N-TERMINAL REGION CRYSTALLIZED WITH POLYETHYLENE GLYCOL 8000
Descriptor:Polymerase acidic protein, MANGANESE (II) ION
Authors:Fudo, S., Yamamoto, N., Nukaga, M., Odagiri, T., Tashiro, M., Hoshino, T.
Deposit date:2016-04-21
Release date:2016-05-11
Last modified:2017-03-01
Method:X-RAY DIFFRACTION (2.749 Å)
Cite:Influence of Precipitants on Molecular Arrangements and Space Groups of Protein Crystals
Cryst.Growth Des., 17, 2017
3VN3
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FUNGAL ANTIFREEZE PROTEIN EXERTS HYPERACTIVITY BY CONSTRUCTING AN INEQUABLE BETA-HELIX
Descriptor:Antifreeze protein, 1,2-ETHANEDIOL
Authors:Kondo, H., Xiao, N., Hanada, Y., Sugimoto, H., Hoshino, T., Garnham, C.P., Davies, P.L., Tsuda, S.
Deposit date:2011-12-21
Release date:2012-06-06
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation
Proc.Natl.Acad.Sci.USA, 109, 2012
3W0M
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA, APO FORM
Descriptor:Hygromycin-B 4-O-kinase, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0N
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA, TERNARY COMPLEX WITH AMP-PNP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, HYGROMYCIN B VARIANT
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0O
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA, TERNARY COMPLEX WITH ADP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, ADENOSINE-5'-DIPHOSPHATE, HYGROMYCIN B VARIANT
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0P
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA (D198A), TERNARY COMPLEX WITH ADP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, ADENOSINE-5'-DIPHOSPHATE, HYGROMYCIN B VARIANT
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0Q
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA (N203A), TERNARY COMPLEX WITH AMP-PNP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, HYGROMYCIN B VARIANT
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0R
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CRYSTAL STRUCTURE OF A THERMOSTABLE MUTANT OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA (N202A), TERNARY COMPLEX WITH AMP-PNP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, HYGROMYCIN B VARIANT
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3W0S
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CRYSTAL STRUCTURE OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(4)-IA, TERNARY COMPLEX WITH AMP-PNP AND HYGROMYCIN B
Descriptor:Hygromycin-B 4-O-kinase, HYGROMYCIN B VARIANT, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Iino, D., Takakura, Y., Fukano, K., Sasaki, Y., Hoshino, T., Ohsawa, K., Nakamura, A., Yajima, S.
Deposit date:2012-11-02
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
3WQK
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CRYSTAL STRUCTURE OF RV3378C WITH PO4
Descriptor:Diterpene synthase, PHOSPHATE ION
Authors:Chan, H.C., Feng, X., Ko, T.P., Huang, C.H., Hu, Y., Zheng, Y., Bogue, S., Nakano, C., Hoshino, T., Zhang, L., Lv, P., Liu, W., Crick, D.C., Liang, P.H., Wang, A.H., Oldfield, E., Guo, R.T.
Deposit date:2014-01-28
Release date:2014-02-19
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014
3WQL
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CRYSTAL STRUCTURE OF RV3378C WITH MG2+ AND PPI
Descriptor:Diterpene synthase, MAGNESIUM ION
Authors:Chan, H.C., Feng, X., Ko, T.P., Huang, C.H., Hu, Y., Zheng, Y., Bogue, S., Nakano, C., Hoshino, T., Zhang, L., Lv, P., Liu, W., Crick, D.C., Liang, P.H., Wang, A.H., Oldfield, E., Guo, R.T.
Deposit date:2014-01-28
Release date:2014-02-19
Last modified:2014-10-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014
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