1Q6C | | CRYSTAL STRUCTURE OF SOYBEAN BETA-AMYLASE COMPLEXED WITH MALTOSE | | Descriptor: | beta-amylase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, SULFATE ION | | Authors: | Hirata, A., Adachi, M., Sekine, A., Kang, Y.N., Utsumi, S., Mikami, B. | | Deposit date: | 2003-08-13 | | Release date: | 2004-02-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (1.86 Å) | | Cite: | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
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1Q6D | | CRYSTAL STRUCTURE OF SOYBEAN BETA-AMYLASE MUTANT (M51T) WITH INCREASED PH OPTIMUM | | Descriptor: | beta-amylase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Sekine, A., Kang, Y.N., Utsumi, S., Mikami, B. | | Deposit date: | 2003-08-13 | | Release date: | 2004-02-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
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1Q6E | | CRYSTAL STRUCTURE OF SOYBEAN BETA-AMYLASE MUTANT (E178Y) WITH INCREASED PH OPTIMUM AT PH 5.4 | | Descriptor: | beta-amylase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Sekine, A., Kang, Y.N., Utsumi, S., Mikami, B. | | Deposit date: | 2003-08-13 | | Release date: | 2004-02-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
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1Q6F | | CRYSTAL STRUCTURE OF SOYBEAN BETA-AMYLASE MUTANT (E178Y) WITH INCREASED PH OPTIMUM AT PH 7.1 | | Descriptor: | beta-amylase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Sekine, A., Kang, Y.N., Utsumi, S., Mikami, B. | | Deposit date: | 2003-08-13 | | Release date: | 2004-02-24 | | Last modified: | 2020-10-14 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
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1Q6G | | CRYSTAL STRUCTURE OF SOYBEAN BETA-AMYLASE MUTANT (N340T) WITH INCREASED PH OPTIMUM | | Descriptor: | beta-amylase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Sekine, A., Kang, Y.N., Utsumi, S., Mikami, B. | | Deposit date: | 2003-08-13 | | Release date: | 2004-02-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
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4FZ2 | | CRYSTAL STRUCTURE OF THE FOURTH TYPE OF ARCHAEAL TRNA SPLICING ENDONUCLEASE FROM CANDIDATUS MICRARCHAEUM ACIDIPHILUM ARMAN-2 | | Descriptor: | tRNA intron endonuclease | | Authors: | Hirata, A., Fujishima, K., Yamagami, R., Kawamura, T., Banfiled, J.F., Kanai, A., Hori, H. | | Deposit date: | 2012-07-06 | | Release date: | 2012-09-12 | | Last modified: | 2013-07-17 | | Method: | X-RAY DIFFRACTION (2.252 Å) | | Cite: | X-ray structure of the fourth type of archaeal tRNA splicing endonuclease: insights into the evolution of a novel three-unit composition and a unique loop involved in broad substrate specificity
Nucleic Acids Res., 40, 2012
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5E71 | |
5E72 | |
1VEM | | CRYSTAL STRUCTURE ANALYSIS OF BACILLUS CEREUS BETA-AMYLASE AT THE OPTIMUM PH (6.5) | | Descriptor: | Beta-amylase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION | | Authors: | Hirata, A., Adachi, M., Utsumi, S., Mikami, B. | | Deposit date: | 2004-04-03 | | Release date: | 2005-05-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Engineering of the pH optimum of Bacillus cereus beta-amylase: conversion of the pH optimum from a bacterial type to a higher-plant type
Biochemistry, 43, 2004
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1VEN | | CRYSTAL STRUCTURE ANALYSIS OF Y164E/MALTOSE OF BACILUS CEREUS BETA-AMYLASE AT PH 4.6 | | Descriptor: | Beta-amylase, alpha-D-glucopyranose, CALCIUM ION | | Authors: | Hirata, A., Adachi, M., Utsumi, S., Mikami, B. | | Deposit date: | 2004-04-03 | | Release date: | 2005-05-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2.02 Å) | | Cite: | Engineering of the pH optimum of Bacillus cereus beta-amylase: conversion of the pH optimum from a bacterial type to a higher-plant type
Biochemistry, 43, 2004
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1VEO | | CRYSTAL STRUCTURE ANALYSIS OF Y164F/MALTOSE OF BACILLUS CEREUS BETA-AMYLASE AT PH 4.6 | | Descriptor: | Beta-amylase, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Utsumi, S., Mikami, B. | | Deposit date: | 2004-04-03 | | Release date: | 2005-05-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2.12 Å) | | Cite: | Engineering of the pH optimum of Bacillus cereus beta-amylase: conversion of the pH optimum from a bacterial type to a higher-plant type
Biochemistry, 43, 2004
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1VEP | | CRYSTAL STRUCTURE ANALYSIS OF TRIPLE (T47M/Y164E/T328N)/MALTOSE OF BACILLUS CEREUS BETA-AMYLASE AT PH 6.5 | | Descriptor: | Beta-amylase, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | | Authors: | Hirata, A., Adachi, M., Utsumi, S., Mikami, B. | | Deposit date: | 2004-04-03 | | Release date: | 2005-05-24 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (2.06 Å) | | Cite: | Engineering of the pH optimum of Bacillus cereus beta-amylase: conversion of the pH optimum from a bacterial type to a higher-plant type
Biochemistry, 43, 2004
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2PA8 | |
3P1Y | |
3P1Z | | CRYSTAL STRUCTURE OF THE APEROPYRUM PERNIX RNA SPLICING ENDONUCLEASE | | Descriptor: | Putative uncharacterized protein, tRNA-splicing endonuclease | | Authors: | Hirata, A. | | Deposit date: | 2010-10-01 | | Release date: | 2011-08-10 | | Last modified: | 2017-11-08 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Cleavage of intron from the standard or non-standard position of the precursor tRNA by the splicing endonuclease of Aeropyrum pernix, a hyper-thermophilic Crenarchaeon, involves a novel RNA recognition site in the Crenarchaea specific loop
Nucleic Acids Res., 39, 2011
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6JP6 | | THE X-RAY STRUCTURE OF YEAST TRNA METHYLTRANSFERASE COMPLEX OF TRM7 AND TRM734 ESSENTIAL FOR 2'-O-METHYLATION AT THE FIRST POSITION OF ANTICODON IN SPECIFIC TRNAS | | Descriptor: | tRNA (guanosine(34)-2'-O)-methyltransferase non-catalytic subunit TRM734, tRNA (cytidine(34)/guanosine(34)-2'-O)-methyltransferase, SULFATE ION, ... | | Authors: | Hirata, A., Okada, K., Yoshii, K., Shiraisi, H., Saijo, S., Yonezawa, K., Sihimzu, N., Hori, H. | | Deposit date: | 2019-03-26 | | Release date: | 2019-10-02 | | Last modified: | 2019-11-20 | | Method: | X-RAY DIFFRACTION (2.699 Å) | | Cite: | Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition.
Nucleic Acids Res., 47, 2019
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6JPL | | THE X-RAY STRUCTURE OF YEAST TRNA METHYLTRANSFERASE TRM7-TRM734 IN COMPLEX WITH S-ADENOSYL-L-METHIONINE | | Descriptor: | tRNA (guanosine(34)-2'-O)-methyltransferase non-catalytic subunit TRM734, tRNA (cytidine(34)/guanosine(34)-2'-O)-methyltransferase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... | | Authors: | Hirata, A., Okada, K., Yoshii, K., Shiraisi, H., Saijo, S., Yonezawa, K., Shimizu, N., Hori, H. | | Deposit date: | 2019-03-27 | | Release date: | 2019-10-02 | | Last modified: | 2019-11-20 | | Method: | X-RAY DIFFRACTION (2.32 Å) | | Cite: | Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition.
Nucleic Acids Res., 47, 2019
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4QJV | |
1CQY | | STARCH BINDING DOMAIN OF BACILLUS CEREUS BETA-AMYLASE | | Descriptor: | BETA-AMYLASE | | Authors: | Yoon, H.J., Hirata, A., Adachi, M., Sekine, A., Utsumi, S., Mikami, B. | | Deposit date: | 1999-08-12 | | Release date: | 1999-08-20 | | Last modified: | 2018-01-31 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Structure of Separated Starch-Binding Domain of Bacillus cereus B-amylase
To be Published
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5X5I | | THE X-RAY CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTION REGULATOR RCDA INVOLVED IN THE REGULATION OF BIOFILM FORMATION IN ESCHERICHIA COLI | | Descriptor: | HTH-type transcriptional regulator RcdA | | Authors: | Sugino, H., Usui, M., Shimada, T., Nakano, M., Ogasawara, H., Ishihama, A., Hirata, A. | | Deposit date: | 2017-02-16 | | Release date: | 2017-12-27 | | Method: | X-RAY DIFFRACTION (2.554 Å) | | Cite: | A structural sketch of RcdA, a transcription factor controlling the master regulator of biofilm formation.
FEBS Lett., 591, 2017
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5X89 | | THE X-RAY CRYSTAL STRUCTURE OF SUBUNIT FUSION RNA SPLICING ENDONUCLEASE FROM METHANOPYRUS KANDLERI | | Descriptor: | EndA-like protein,tRNA-splicing endonuclease, PHOSPHATE ION | | Authors: | Kaneta, A., Fujishima, K., Morikazu, W., Hori, H., Hirata, A. | | Deposit date: | 2017-03-01 | | Release date: | 2018-01-24 | | Last modified: | 2018-03-21 | | Method: | X-RAY DIFFRACTION (1.53 Å) | | Cite: | The RNA-splicing endonuclease from the euryarchaeaon Methanopyrus kandleri is a heterotetramer with constrained substrate specificity
Nucleic Acids Res., 46, 2018
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3W5A | | CRYSTAL STRUCTURE OF THE CALCIUM PUMP AND SARCOLIPIN FROM RABBIT FAST TWITCH SKELETAL MUSCLE IN THE E1.MG2+ STATE | | Descriptor: | SERCA1a, Sarcolipin, 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), ... | | Authors: | Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G. | | Deposit date: | 2013-01-27 | | Release date: | 2013-03-06 | | Last modified: | 2013-03-27 | | Method: | X-RAY DIFFRACTION (3.01 Å) | | Cite: | Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
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3W5B | | CRYSTAL STRUCTURE OF THE RECOMBINANT SERCA1A (CALCIUM PUMP OF FAST TWITCH SKELETAL MUSCLE) IN THE E1.MG2+ STATE | | Descriptor: | SERCA1a, SODIUM ION, MAGNESIUM ION, ... | | Authors: | Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G. | | Deposit date: | 2013-01-27 | | Release date: | 2013-03-06 | | Last modified: | 2013-03-27 | | Method: | X-RAY DIFFRACTION (3.2 Å) | | Cite: | Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
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3W5C | | CRYSTAL STRUCTURE OF THE CALCIUM PUMP IN THE E2 STATE FREE FROM EXOGENOUS INHIBITORS | | Descriptor: | SERCA1a, SODIUM ION, PHOSPHATIDYLETHANOLAMINE | | Authors: | Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G. | | Deposit date: | 2013-01-27 | | Release date: | 2013-03-06 | | Last modified: | 2013-03-27 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
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3W5D | | CRYSTAL STRUCTURE OF THE CALCIUM PUMP IN THE E2+PI STATE | | Descriptor: | SERCA1a, SODIUM ION, PHOSPHATIDYLETHANOLAMINE, ... | | Authors: | Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G. | | Deposit date: | 2013-01-27 | | Release date: | 2013-03-06 | | Last modified: | 2013-03-27 | | Method: | X-RAY DIFFRACTION (2.45 Å) | | Cite: | Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
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