Author results

1FOW
  • Download 1fow
  • View 1fow
Molmil generated image of 1fow
NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE
Descriptor:L11-C76
Authors:Markus, M.A., Hinck, A.P., Huang, S., Draper, D.E., Torchia, D.A.
Deposit date:1996-09-13
Release date:1997-03-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Nat.Struct.Biol., 4, 1997
1FOX
  • Download 1fox
  • View 1fox
Molmil generated image of 1fox
NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES
Descriptor:L11-C76
Authors:Markus, M.A., Hinck, A.P., Huang, S., Draper, D.E., Torchia, D.A.
Deposit date:1996-09-13
Release date:1997-03-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
Nat.Struct.Biol., 4, 1997
1C05
  • Download 1c05
  • View 1c05
Molmil generated image of 1c05
SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S4 DELTA 41, REFINED WITH DIPOLAR COUPLINGS (MINIMIZED AVERAGE STRUCTURE)
Descriptor:RIBOSOMAL PROTEIN S4 DELTA 41
Authors:Markus, M.A., Gerstner, R.B., Draper, D.E., Torchia, D.A.
Deposit date:1999-07-14
Release date:1999-09-29
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Refining the overall structure and subdomain orientation of ribosomal protein S4 delta41 with dipolar couplings measured by NMR in uniaxial liquid crystalline phases.
J.Mol.Biol., 292, 1999
1C06
  • Download 1c06
  • View 1c06
Molmil generated image of 1c06
SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN S4 DELTA 41, REFINED WITH DIPOLAR COUPLINGS (ENSEMBLE OF 16 STRUCTURES)
Descriptor:RIBOSOMAL PROTEIN S4 DELTA 41
Authors:Markus, M.A., Gerstner, R.B., Draper, D.E., Torchia, D.A.
Deposit date:1999-07-14
Release date:1999-09-29
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Refining the overall structure and subdomain orientation of ribosomal protein S4 delta41 with dipolar couplings measured by NMR in uniaxial liquid crystalline phases.
J.Mol.Biol., 292, 1999
1HC8
  • Download 1hc8
  • View 1hc8
Molmil generated image of 1hc8
CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
Descriptor:RIBOSOMAL PROTEIN L11, 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN, MAGNESIUM ION, ...
Authors:Conn, G.L., Draper, D.E., Lattman, E.E., Gittis, A.G.
Deposit date:2001-04-27
Release date:2002-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Compact RNA Tertiary Structure Contains a Buried Backbone-K+ Complex
J.Mol.Biol., 318, 2002
1ACI
  • Download 1aci
  • View 1aci
Molmil generated image of 1aci
L11 RIBOSOMAL PROTEIN RNA BINDING DOMAIN, NMR, 20 STRUCTURES
Descriptor:L11 RIBOSOMAL PROTEIN
Authors:Xing, Y., Draper, D.E.
Deposit date:1997-02-07
Release date:1998-01-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Cooperative interactions of RNA and thiostrepton antibiotic with two domains of ribosomal protein L11.
Biochemistry, 35, 1996
1FOY
  • Download 1foy
  • View 1foy
Molmil generated image of 1foy
THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:RIBOSOMAL PROTEIN L11
Authors:Hinck, A.P., Markus, M.A., Huang, S., Grzesiek, S., Kustanovich, I., Draper, D.E., Torchia, D.A.
Deposit date:1997-05-26
Release date:1997-11-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The RNA binding domain of ribosomal protein L11: three-dimensional structure of the RNA-bound form of the protein and its interaction with 23 S rRNA.
J.Mol.Biol., 274, 1997
1QA6
  • Download 1qa6
  • View 1qa6
Molmil generated image of 1qa6
CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX
Descriptor:58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN, RIBOSOMAL PROTEIN L11, MAGNESIUM ION, ...
Authors:Conn, G.L., Draper, D.E., Lattman, E.E., Gittis, A.G.
Deposit date:1999-04-15
Release date:1999-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a conserved ribosomal protein-RNA complex.
Science, 284, 1999
1Y39
  • Download 1y39
  • View 1y39
Molmil generated image of 1y39
CO-EVOLUTION OF PROTEIN AND RNA STRUCTURES WITHIN A HIGHLY CONSERVED RIBOSOMAL DOMAIN
Descriptor:58 Nucleotide Ribosomal 23S RNA Domain, 50S ribosomal protein L11, COBALT (III) ION, ...
Authors:Dunstan, M.S., GuhaThakurta, D., Draper, D.E., Conn, G.L.
Deposit date:2004-11-24
Release date:2005-03-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Coevolution of Protein and RNA Structures within a Highly Conserved Ribosomal Domain
Chem.Biol., 12, 2005
2E34
  • Download 2e34
  • View 2e34
Molmil generated image of 2e34
L11 STRUCTURE WITH RDC AND RG REFINEMENT
Descriptor:50S ribosomal protein L11
Authors:Lee, D., Walsh, J.D., Yu, P., Markus, M.A., Choli-Papadopoulous, T., Schwieters, C.D., Krueger, S., Draper, D.E., Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E35
  • Download 2e35
  • View 2e35
Molmil generated image of 2e35
THE MINIMIZED AVERAGE STRUCTURE OF L11 WITH RG REFINEMENT
Descriptor:50S ribosomal protein L11
Authors:Lee, D., Walsh, J.D., Yu, P., Markus, M.A., Choli-Papadopoulous, T., Schwieters, C.D., Krueger, S., Draper, D.E., Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E36
  • Download 2e36
  • View 2e36
Molmil generated image of 2e36
L11 WITH SANS REFINEMENT
Descriptor:50S ribosomal protein L11
Authors:Lee, D., Walsh, J.D., Yu, P., Markus, M.A., Choli-Papadopoulous, T., Schwieters, C.D., Krueger, S., Draper, D.E., Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2FOW
  • Download 2fow
  • View 2fow
Molmil generated image of 2fow
THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, 26 STRUCTURES
Descriptor:RIBOSOMAL PROTEIN L11
Authors:Hinck, A.P., Markus, M.A., Huang, S., Grzesiek, S., Kustanovich, I., Draper, D.E., Torchia, D.A.
Deposit date:1997-05-26
Release date:1997-11-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The RNA binding domain of ribosomal protein L11: three-dimensional structure of the RNA-bound form of the protein and its interaction with 23 S rRNA.
J.Mol.Biol., 274, 1997
2H8W
  • Download 2h8w
  • View 2h8w
Molmil generated image of 2h8w
SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L11
Descriptor:50S ribosomal protein L11
Authors:Lee, D., Walsh, J.D., Yu, P., Choli-Papadopoulou, T., Krueger, S., Draper, D., Wang, Y.-X.
Deposit date:2006-06-08
Release date:2007-02-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Structure of Free L11 and Functional Dynamics of L11 in Free, L11-rRNA(58 nt) Binary and L11-rRNA(58 nt)-thiostrepton Ternary Complexes.
J.Mol.Biol., 367, 2007
5E54
  • Download 5e54
  • View 5e54
Molmil generated image of 5e54
TWO APO STRUCTURES OF THE ADENINE RIBOSWITCH APTAMER DOMAIN DETERMINED USING AN X-RAY FREE ELECTRON LASER
Descriptor:Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain, MAGNESIUM ION
Authors:Stagno, J.R., Wang, Y.-X., Liu, Y., Bhandari, Y.R., Conrad, C.E., Nelson, G., Li, C., Wendel, D.R., White, T.A., Barty, A., Tuckey, R.A., Zatsepin, N.A., Grant, T.D., Fromme, P., Tan, K., Ji, X., Spence, J.C.H.
Deposit date:2015-10-07
Release date:2016-11-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5SWD
  • Download 5swd
  • View 5swd
Molmil generated image of 5swd
STRUCTURE OF THE ADENINE RIBOSWITCH APTAMER DOMAIN IN AN INTERMEDIATE-BOUND STATE
Descriptor:Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain, ADENINE, ...
Authors:Stagno, J.R., Wang, Y.-X., Liu, Y., Bhandari, Y.R., Conrad, C.E., Nelson, G., Li, C., Wendel, D.R., White, T.A., Barty, A., Tuckey, R.A., Zatsepin, N.A., Grant, T.D., Fromme, P., Tan, K., Ji, X., Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5SWE
  • Download 5swe
  • View 5swe
Molmil generated image of 5swe
LIGAND-BOUND STRUCTURE OF ADENINE RIBOSWITCH APTAMER DOMAIN CONVERTED IN CRYSTAL FROM ITS LIGAND-FREE STATE USING LIGAND MIXING SERIAL FEMTOSECOND CRYSTALLOGRAPHY
Descriptor:Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain, ADENINE
Authors:Stagno, J.R., Wang, Y.-X., Liu, Y., Bhandari, Y.R., Conrad, C.E., Nelson, G., Li, C., Wendel, D.R., White, T.A., Barty, A., Tuckey, R.A., Zatsepin, N.A., Grant, T.D., Fromme, P., Tan, K., Ji, X., Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
1EG0
  • Download 1eg0
  • View 1eg0
Molmil generated image of 1eg0
FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME
Descriptor:FRAGMENT OF 16S RRNA HELIX 23, FRAGMENT OF 23S RRNA, HELIX 95 OF 23S RRNA, ...
Authors:Gabashvili, I.S., Agrawal, R.K., Spahn, C.M.T., Grassucci, R.A., Svergun, D.I., Frank, J., Penczek, P.
Deposit date:2000-02-11
Release date:2000-03-06
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Solution structure of the E. coli 70S ribosome at 11.5 A resolution.
Cell(Cambridge,Mass.), 100, 2000
1FKA
  • Download 1fka
  • View 1fka
Molmil generated image of 1fka
STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
Descriptor:16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Schluenzen, F., Tocilj, A., Zarivach, R., Harms, J., Gluehmann, M., Janell, D., Bashan, A., Bartels, H., Agmon, I., Franceschi, F., Yonath, A.
Deposit date:2000-08-09
Release date:2000-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.
Cell(Cambridge,Mass.), 102, 2000
1OLN
  • Download 1oln
  • View 1oln
Molmil generated image of 1oln
MODEL FOR THIOSTREPTON ANTIBIOTIC BINDING TO L11 SUBSTRATE FROM 50S RIBOSOMAL RNA
Descriptor:50S RIBOSOMAL PROTEIN L11, THIOSTREPTON, RNA
Authors:Lentzen, G., Klinck, R., Matassova, N., Aboul-Ela, F., Murchie, A.I.H.
Deposit date:2003-08-08
Release date:2003-09-11
Last modified:2019-04-24
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Structural Basis for Contrasting Activities of Ribosome Binding Thiazole Antibiotics
Chem.Biol., 10, 2003
1QD7
  • Download 1qd7
  • View 1qd7
Molmil generated image of 1qd7
PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
Descriptor:CENTRAL FRAGMENT OF 16 S RNA, END FRAGMENT OF 16 S RNA, S4 RIBOSOMAL PROTEIN, ...
Authors:Clemons Jr., W.M., May, J.L.C., Wimberly, B.T., McCutcheon, J.P., Capel, M.S., Ramakrishnan, V.
Deposit date:1999-07-09
Release date:1999-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
Nature, 400, 1999