Author results

1KQW
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CRYSTAL STRUCTURE OF HOLO-CRBP FROM ZEBRAFISH
Descriptor:Cellular retinol-binding protein, RETINOL
Authors:Calderone, V., Folli, C., Marchesani, A., Berni, R., Zanotti, G.
Deposit date:2002-01-08
Release date:2002-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Identification and structural analysis of a zebrafish apo and holo cellular retinol-binding protein.
J.Mol.Biol., 321, 2002
1KQX
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CRYSTAL STRUCTURE OF APO-CRBP FROM ZEBRAFISH
Descriptor:Cellular retinol-binding protein
Authors:Calderone, V., Folli, C., Marchesani, A., Berni, R., Zanotti, G.
Deposit date:2002-01-08
Release date:2002-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and structural analysis of a zebrafish apo and holo cellular retinol-binding protein.
J.Mol.Biol., 321, 2002
1RMQ
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CRYSTAL STRUCTURE OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE WITH OSMIATE MIMICKING THE CATALYTIC INTERMEDIATE
Descriptor:Class B acid phosphatase, COBALT (II) ION, OSMIUM ION
Authors:Calderone, V., Forleo, C., Benvenuti, M., Rossolini, G.M., Thaller, M.C., Mangani, S.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights in the catalytic mechanism of AphA from Escherichia coli
To be Published
1RMT
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CRYSTAL STRUCTURE OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE COMPLEXED WITH ADENOSINE.
Descriptor:Class B acid phosphatase, MAGNESIUM ION, ADENOSINE
Authors:Calderone, V., Forleo, C., Benvenuti, M., Rossolini, G.M., Thaller, M.C., Mangani, S.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insights in the catalytic mechanism of AphA from Escherichia coli
To be Published
1RMY
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CRYSTAL STRUCTURE OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE TERNARY COMPLEX WITH DEOXYCYTOSINE AND PHOSPHATE BOUND TO THE CATALYTIC METAL
Descriptor:Class B acid phosphatase, MAGNESIUM ION, 2'-DEOXYCYTIDINE, ...
Authors:Calderone, V., Forleo, C., Benvenuti, M., Rossolini, G.M., Thaller, M.C., Mangani, S.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights in the catalytic mechanism of AphA from Escherichia coli
To be Published
2B82
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CRYSTAL STRUCTURE OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE TERNARY COMPLEX WITH ADENOSINE AND PHOSPHATE BOUND TO THE CATALYTIC METAL AT 1.2 A RESOLUTION
Descriptor:class B acid phosphatase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Calderone, V., Forleo, C., Benvenuti, M., Thaller, M.C., Rossolini, G.M., Mangani, S.
Deposit date:2005-10-06
Release date:2005-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A structure-based proposal for the catalytic mechanism of the bacterial acid phosphatase AphA belonging to the DDDD superfamily of phosphohydrolases
J.Mol.Biol., 355, 2006
2B8J
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CRYSTAL STRUCTURE OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE TERNARY COMPLEX WITH ADENOSINE AND PHOSPHATE AT 2 A RESOLUTION
Descriptor:class B acid phosphatase, MAGNESIUM ION, SPERMINE, ...
Authors:Calderone, V., Forleo, C., Benvenuti, M., Thaller, M.C., Rossolini, G.M., Mangani, S.
Deposit date:2005-10-07
Release date:2005-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:A structure-based proposal for the catalytic mechanism of the bacterial acid phosphatase AphA belonging to the DDDD superfamily of phosphohydrolases
J.Mol.Biol., 355, 2006
1KT3
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CRYSTAL STRUCTURE OF BOVINE HOLO-RBP AT PH 2.0
Descriptor:Plasma retinol-binding protein, RETINOL
Authors:Calderone, V., Berni, R., Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT4
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CRYSTAL STRUCTURE OF BOVINE HOLO-RBP AT PH 3.0
Descriptor:plasma retinol-binding protein, RETINOL
Authors:Calderone, V., Berni, R., Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.461 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT5
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CRYSTAL STRUCTURE OF BOVINE HOLO-RBP AT PH 4.0
Descriptor:Plasma retinol-binding protein, RETINOL
Authors:Calderone, V., Berni, R., Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT6
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CRYSTAL STRUCTURE OF BOVINE HOLO-RBP AT PH 9.0
Descriptor:plasma retinol-binding protein, RETINOL
Authors:Calderone, V., Berni, R., Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1KT7
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CRYSTAL STRUCTURE OF BOVINE HOLO-RBP AT PH 7.0
Descriptor:Plasma retinol-binding protein, RETINOL
Authors:Calderone, V., Berni, R., Zanotti, G.
Deposit date:2002-01-15
Release date:2003-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.274 Å)
Cite:High-resolution Structures of Retinol-binding Protein in Complex with Retinol: pH-induced Protein Structural Changes in the Crystal State
J.Mol.Biol., 329, 2003
1N8N
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CRYSTAL STRUCTURE OF THE AU3+ COMPLEX OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE FROM E. COLI AT 1.69 A RESOLUTION
Descriptor:Class B acid phosphatase, GOLD 3+ ION
Authors:Calderone, V., Forleo, C., Benvenuti, M., Rossolini, G.M., Thaller, M.C., Mangani, S.
Deposit date:2002-11-21
Release date:2004-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The first structure of a bacterial class B Acid phosphatase reveals further structural heterogeneity among phosphatases of the haloacid dehalogenase fold.
J.Mol.Biol., 335, 2004
1N9K
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CRYSTAL STRUCTURE OF THE BROMIDE ADDUCT OF APHA CLASS B ACID PHOSPHATASE/PHOSPHOTRANSFERASE FROM E. COLI AT 2.2 A RESOLUTION
Descriptor:Class B acid phosphatase, MAGNESIUM ION, BROMIDE ION
Authors:Calderone, V., Forleo, C., Benvenuti, M., Rossolini, G.M., Thaller, M.C., Mangani, S.
Deposit date:2002-11-25
Release date:2004-02-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The first structure of a bacterial class B Acid phosphatase reveals further structural heterogeneity among phosphatases of the haloacid dehalogenase fold.
J.Mol.Biol., 335, 2004
1NZE
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CRYSTAL STRUCTURE OF PSBQ POLYPEPTIDE OF PHOTOSYSTEM II FROM HIGHER PLANTS
Descriptor:Oxygen-evolving enhancer protein 3, ZINC ION
Authors:Calderone, V., Trabucco, M., Vujicic, A., Battistutta, R., Giacometti, G.M., Andreucci, F., Barbato, R., Zanotti, G.
Deposit date:2003-02-17
Release date:2003-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the PsbQ protein of photosystem II from higher plants
Embo Rep., 4, 2003
1RJU
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CRYSTAL STRUCTURE OF A TRUNCATED FORM OF YEAST COPPER THIONEIN
Descriptor:Metallothionein, COPPER (I) ION
Authors:Calderone, V., Dolderer, B., Hartmann, H.J., Echner, H., Luchinat, C., Del Bianco, C., Mangani, S., Weser, U.
Deposit date:2003-11-20
Release date:2004-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.
Proc.Natl.Acad.Sci.USA, 102, 2005
2AEO
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CRYSTAL STRUCTURE OF CISPLATINATED BOVINE CU,ZN SUPEROXIDE DISMUTASE
Descriptor:Superoxide dismutase [Cu-Zn], COPPER (II) ION, ZINC ION, ...
Authors:Calderone, V., Casini, A., Mangani, S., Messori, L., Orioli, P.L.
Deposit date:2005-07-23
Release date:2006-05-02
Last modified:2017-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural investigation of cisplatin-protein interactions: selective platination of His19 in a cuprozinc superoxide dismutase.
Angew. Chem. Int. Ed. Engl., 45, 2006
5HYD
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CRYSTAL STRUCTURE OF CALCIUM-FREE HUMAN S100Z
Descriptor:Protein S100-Z
Authors:Calderone, V., Fragai, M., Luchinat, C., Gallo, G.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2017-06-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Solving the crystal structure of human calcium-free S100Z: the siege and conquer of one of the last S100 family strongholds.
J. Biol. Inorg. Chem., 22, 2017
1LPJ
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HUMAN CRBP IV
Descriptor:Retinol-binding protein IV, cellular
Authors:Calderone, V., Zanotti, G., Berni, R., Folli, C.
Deposit date:2002-05-08
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand binding and structural analysis of a human putative cellular retinol-binding protein
J.Biol.Chem., 277, 2002
1XTL
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CRYSTAL STRUCTURE OF P104H MUTANT OF SOD-LIKE PROTEIN FROM BACILLUS SUBTILIS.
Descriptor:Hypothetical superoxide dismutase-like protein yojM, COPPER (II) ION, ZINC ION
Authors:Calderone, V., Mangani, S., Banci, L., Benvenuti, M., Bertini, I., Viezzoli, M.S., Fantoni, A.
Deposit date:2004-10-22
Release date:2005-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:From an Inactive Prokaryotic SOD Homologue to an Active Protein through Site-Directed Mutagenesis.
J.Am.Chem.Soc., 127, 2005
1XTM
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CRYSTAL STRUCTURE OF THE DOUBLE MUTANT Y88H-P104H OF A SOD-LIKE PROTEIN FROM BACILLUS SUBTILIS.
Descriptor:Hypothetical superoxide dismutase-like protein yojM, COPPER (II) ION, ZINC ION
Authors:Calderone, V., Mangani, S., Banci, L., Benvenuti, M., Bertini, I., Fantoni, A., Viezzoli, M.S.
Deposit date:2004-10-22
Release date:2005-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:From an Inactive Prokaryotic SOD Homologue to an Active Protein through Site-Directed Mutagenesis.
J.Am.Chem.Soc., 127, 2005
2OXU
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UNINHIBITED FORM OF HUMAN MMP-12
Descriptor:Macrophage metalloelastase, ZINC ION, CALCIUM ION
Authors:Calderone, V., Bertini, I., Fragai, M., Luchinat, C., Maletta, M., Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
2OXW
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HUMAN MMP-12 COMPLEXED WITH THE PEPTIDE IAG
Descriptor:Macrophage metalloelastase, ILE-ALA-GLY peptide, ZINC ION, ...
Authors:Calderone, V., Bertini, I., Fragai, M., Luchinat, C., Maletta, M., Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
2OXZ
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HUMAN MMP-12 IN COMPLEX WITH TWO PEPTIDES PQG AND IAG
Descriptor:Macrophage metalloelastase, PRO-GLN-GLY peptide, ILE-ALA-GLY peptide, ...
Authors:Calderone, V., Bertini, I., Fragai, M., Luchinat, C., Maletta, M., Yeo, K.J.
Deposit date:2007-02-21
Release date:2007-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Snapshots of the reaction mechanism of matrix metalloproteinases.
ANGEW.CHEM.INT.ED.ENGL., 45, 2006
3EHX
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CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN MMP12 COMPLEXED WITH THE INHIBITOR (R)-2-(BIPHENYL-4-YLSULFONAMIDO)-4-METHYLPENTANOIC ACID
Descriptor:Macrophage metalloelastase, ZINC ION, CALCIUM ION, ...
Authors:Calderone, V.
Deposit date:2008-09-15
Release date:2009-05-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biotin-tagged probes for MMP expression and activation: design, synthesis, and binding properties
Bioconjug.Chem., 20, 2009