Author results

1DLF
  • Download 1dlf
  • View 1dlf
Molmil generated image of 1dlf
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 5.25
Descriptor:ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S), SULFATE ION
Authors:Nakasako, M., Takahashi, H., Shimada, I., Arata, Y.
Deposit date:1998-07-14
Release date:1999-07-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The pH-dependent structural variation of complementarity-determining region H3 in the crystal structures of the Fv fragment from an anti-dansyl monoclonal antibody.
J.Mol.Biol., 291, 1999
2DLF
  • Download 2dlf
  • View 2dlf
Molmil generated image of 2dlf
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 6.75
Descriptor:PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S)-KAPPA (LIGHT CHAIN)), PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) (HEAVY CHAIN)), SULFATE ION
Authors:Nakasako, M., Takahashi, H., Shimada, I., Arata, Y.
Deposit date:1998-12-17
Release date:1999-12-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The pH-dependent structural variation of complementarity-determining region H3 in the crystal structures of the Fv fragment from an anti-dansyl monoclonal antibody.
J.Mol.Biol., 291, 1999
2WUH
  • Download 2wuh
  • View 2wuh
Molmil generated image of 2wuh
CRYSTAL STRUCTURE OF THE DDR2 DISCOIDIN DOMAIN BOUND TO A TRIPLE- HELICAL COLLAGEN PEPTIDE
Descriptor:DISCOIDIN DOMAIN RECEPTOR 2, COLLAGEN PEPTIDE
Authors:Carafoli, F., Bihan, D., Stathopoulos, S., Konitsiotis, A.D., Kvansakul, M., Farndale, R.W., Leitinger, B., Hohenester, E.
Deposit date:2009-10-05
Release date:2009-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic Insight Into Collagen Recognition by Discoidin Domain Receptor 2
Structure, 17, 2009
2NOO
  • Download 2noo
  • View 2noo
Molmil generated image of 2noo
CRYSTAL STRUCTURE OF MUTANT NIKA
Descriptor:Nickel-binding periplasmic protein, IODIDE ION, NICKEL (II) ION
Authors:Addy, C., Ohara, M., Kawai, F., Kidera, A., Ikeguchi, M., Fuchigami, S., Osawa, M., Shimada, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.
Deposit date:2006-10-26
Release date:2007-01-23
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography.
Acta Crystallogr.,Sect.D, 63, 2007
1WZ1
  • Download 1wz1
  • View 1wz1
Molmil generated image of 1wz1
CRYSTAL STRUCTURE OF THE FV FRAGMENT COMPLEXED WITH DANSYL-LYSINE
Descriptor:Ig light chain, Ig heavy chain, N~6~-{[5-(DIMETHYLAMINO)-1-NAPHTHYL]SULFONYL}-L-LYSINE
Authors:Nakasako, M., Oka, T., Mashumo, M., Takahashi, H., Shimada, I., Yamaguchi, Y., Kato, K., Arata, Y.
Deposit date:2005-02-21
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformational dynamics of complementarity-determining region H3 of an anti-dansyl Fv fragment in the presence of its hapten
J.Mol.Biol., 351, 2005
3X01
  • Download 3x01
  • View 3x01
Molmil generated image of 3x01
CRYSTAL STRUCTURE OF PIP4KIIBETA COMPLEX WITH AMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, ADENOSINE MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
1NGP
  • Download 1ngp
  • View 1ngp
Molmil generated image of 1ngp
N1G9 (IGG1-LAMBDA) FAB FRAGMENT COMPLEXED WITH (4-HYDROXY-3-NITROPHENYL) ACETATE
Descriptor:N1G9 (IGG1-LAMBDA), SULFATE ION, 2-(4-HYDROXY-3-NITROPHENYL)ACETIC ACID
Authors:Mizutani, R., Satow, Y.
Deposit date:1995-06-23
Release date:1996-07-11
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three-dimensional structures of the Fab fragment of murine N1G9 antibody from the primary immune response and of its complex with (4-hydroxy-3-nitrophenyl)acetate.
J.Mol.Biol., 254, 1995
1NGQ
  • Download 1ngq
  • View 1ngq
Molmil generated image of 1ngq
N1G9 (IGG1-LAMBDA) FAB FRAGMENT
Descriptor:N1G9 (IGG1-LAMBDA), SULFATE ION
Authors:Mizutani, R., Satow, Y.
Deposit date:1995-06-23
Release date:1996-07-11
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three-dimensional structures of the Fab fragment of murine N1G9 antibody from the primary immune response and of its complex with (4-hydroxy-3-nitrophenyl)acetate.
J.Mol.Biol., 254, 1995
3X02
  • Download 3x02
  • View 3x02
Molmil generated image of 3x02
CRYSTAL STRUCTURE OF PIP4KIIBETA COMPLEX WITH GMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, GUANOSINE-5'-MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X05
  • Download 3x05
  • View 3x05
Molmil generated image of 3x05
CRYSTAL STRUCTURE OF PIP4KIIBETA T201M COMPLEX WITH AMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, ADENOSINE MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X0C
  • Download 3x0c
  • View 3x0c
Molmil generated image of 3x0c
CRYSTAL STRUCTURE OF PIP4KIIBETA I368A COMPLEX WITH GMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, GUANOSINE-5'-MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3WZZ
  • Download 3wzz
  • View 3wzz
Molmil generated image of 3wzz
CRYSTAL STRUCTURE OF PIP4KIIBETA
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-08
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X04
  • Download 3x04
  • View 3x04
Molmil generated image of 3x04
CRYSTAL STRUCTURE OF PIP4KIIBETA COMPLEX WITH GMPPNP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X07
  • Download 3x07
  • View 3x07
Molmil generated image of 3x07
CRYSTAL STRUCTURE OF PIP4KIIBETA N203A COMPLEX WITH AMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, ADENOSINE MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X0A
  • Download 3x0a
  • View 3x0a
Molmil generated image of 3x0a
CRYSTAL STRUCTURE OF PIP4KIIBETA F205L COMPLEX WITH GMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, GUANOSINE-5'-MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X0B
  • Download 3x0b
  • View 3x0b
Molmil generated image of 3x0b
CRYSTAL STRUCTURE OF PIP4KIIBETA I368A COMPLEX WITH AMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, ADENOSINE MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X06
  • Download 3x06
  • View 3x06
Molmil generated image of 3x06
CRYSTAL STRUCTURE OF PIP4KIIBETA T201M COMPLEX WITH GMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, GUANOSINE-5'-MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X03
  • Download 3x03
  • View 3x03
Molmil generated image of 3x03
CRYSTAL STRUCTURE OF PIP4KIIBETA COMPLEX WITH AMPPNP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X09
  • Download 3x09
  • View 3x09
Molmil generated image of 3x09
CRYSTAL STRUCTURE OF PIP4KIIBETA F205L COMPLEX WITH AMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, ADENOSINE MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X08
  • Download 3x08
  • View 3x08
Molmil generated image of 3x08
CRYSTAL STRUCTURE OF PIP4KIIBETA N203A COMPLEX WITH GMP
Descriptor:Phosphatidylinositol 5-phosphate 4-kinase type-2 beta, GUANOSINE-5'-MONOPHOSPHATE
Authors:Takeuchi, K., Lo, Y.H., Sumita, K., Senda, M., Terakawa, J., Dimitoris, A., Locasale, J.W., Sasaki, M., Yoshino, H., Zhang, Y., Kahoud, E.R., Takano, T., Yokota, T., Emerling, B., Asara, J.A., Ishida, T., Shimada, I., Daikoku, T., Cantley, L.C., Senda, T., Sasaki, A.T.
Deposit date:2014-10-09
Release date:2015-10-14
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
5X9G
  • Download 5x9g
  • View 5x9g
Molmil generated image of 5x9g
CRYSTAL STRUCTURE OF THE CYTOSOLIC DOMAIN OF THE MG2+ CHANNEL MGTE IN COMPLEX WITH ATP
Descriptor:Magnesium transporter MgtE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Tomita, A., Hattori, M., Nureki, O.
Deposit date:2017-03-07
Release date:2017-08-16
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:ATP-dependent modulation of MgtE in Mg(2+) homeostasis
Nat Commun, 8, 2017
5X9H
  • Download 5x9h
  • View 5x9h
Molmil generated image of 5x9h
CRYSTAL STRUCTURE OF THE MG2+ CHANNEL MGTE IN COMPLEX WITH ATP
Descriptor:Magnesium transporter MgtE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Tomita, A., Hattori, M., Nureki, O.
Deposit date:2017-03-07
Release date:2017-08-16
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.598 Å)
Cite:ATP-dependent modulation of MgtE in Mg(2+) homeostasis
Nat Commun, 8, 2017
1BDC
  • Download 1bdc
  • View 1bdc
Molmil generated image of 1bdc
STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, 10 STRUCTURES
Descriptor:STAPHYLOCOCCUS AUREUS PROTEIN A
Authors:Gouda, H., Torigoe, H., Saito, A., Sato, M., Arata, Y., Shimada, I.
Deposit date:1996-06-28
Release date:1997-01-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures.
Biochemistry, 31, 1992
1BDD
  • Download 1bdd
  • View 1bdd
Molmil generated image of 1bdd
STAPHYLOCOCCUS AUREUS PROTEIN A, IMMUNOGLOBULIN-BINDING B DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:STAPHYLOCOCCUS AUREUS PROTEIN A
Authors:Gouda, H., Torigoe, H., Saito, A., Sato, M., Arata, Y., Shimada, I.
Deposit date:1996-06-28
Release date:1997-01-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures.
Biochemistry, 31, 1992
1D1H
  • Download 1d1h
  • View 1d1h
Molmil generated image of 1d1h
SOLUTION STRUCTURE OF HANATOXIN 1
Descriptor:HANATOXIN TYPE 1
Authors:Takahashi, H., Kim, J.I., Sato, K., Swartz, K.J., Shimada, I.
Deposit date:1999-09-16
Release date:2000-09-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of hanatoxin1, a gating modifier of voltage-dependent K(+) channels: common surface features of gating modifier toxins.
J.Mol.Biol., 297, 2000
<12>