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6N1D
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X-RAY CRYSTAL COMPLEX SHOWING SPONTANEOUS RIBOSOMAL TRANSLOCATION OF MRNA AND TRNAS INTO A CHIMERIC HYBRID STATE
Descriptor:16S rRNA, 23S rRNA, 5s rRNA, ...
Authors:Noller, H.F., Donohue, J.P., Lancaster, L., Zhou, J.
Deposit date:2018-11-08
Release date:2019-04-03
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Spontaneous ribosomal translocation of mRNA and tRNAs into a chimeric hybrid state.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
486D
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X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES
Descriptor:P-SITE TRNA OF 70S RIBOSOME, P-SITE CODON OF 70S RIBOSOME, A-SITE TRNA OF 70S RIBOSOME, ...
Authors:Cate, J.H., Yusupov, M.M., Yusupova, G.Zh., Earnest, T.N., Noller, H.F.
Deposit date:1999-09-09
Release date:1999-10-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:X-ray crystal structures of 70S ribosome functional complexes.
Science, 285, 1999
6BY1
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E. COLI PH03H9 COMPLEX
Descriptor:16S ribosomal RNA, 23S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Amiri, H., Noller, H.F.
Deposit date:2017-12-19
Release date:2019-02-27
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:Structural evidence for product stabilization by the ribosomal mRNA helicase.
RNA, 25, 2019
1EMI
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STRUCTURE OF 16S RRNA IN THE REGION AROUND RIBOSOMAL PROTEIN S8.
Descriptor:16S RIBOSOMAL RNA, RIBOSOMAL PROTEIN S8
Authors:Lancaster, L., Culver, G.M., Yusupova, G.Z., Cate, J.H., Yuspov, M.M., Noller, H.F.
Deposit date:2000-03-16
Release date:2000-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:The location of protein S8 and surrounding elements of 16S rRNA in the 70S ribosome from combined use of directed hydroxyl radical probing and X-ray crystallography.
RNA, 6, 2000
1JGO
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THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGO, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
Descriptor:30S 16S ribosomal RNA, tRNA(Phe), MESSENGER RNA MK27, ...
Authors:Yusupova, G.Z., Yusupov, M.M., Cate, J.H.D., Noller, H.F.
Deposit date:2001-06-26
Release date:2001-07-20
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (5.6 Å)
Cite:The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
1JGP
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THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGP, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
Descriptor:30S 16S ribosomal RNA, tRNA(Phe), MESSENGER RNA MV36, ...
Authors:Yusupova, G.Z., Yusupov, M.M., Cate, J.H.D., Noller, H.F.
Deposit date:2001-06-26
Release date:2001-07-20
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (7 Å)
Cite:The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
1JGQ
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THE PATH OF MESSENGER RNA THROUGH THE RIBOSOME. THIS FILE, 1JGQ, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
Descriptor:30S 16S ribosomal RNA, tRNA(Phe), MESSENGER RNA MF36, ...
Authors:Yusupova, G.Z., Yusupov, M.M., Cate, J.H.D., Noller, H.F.
Deposit date:2001-06-26
Release date:2001-07-20
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (5 Å)
Cite:The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
4V42
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CRYSTAL STRUCTURE OF THE RIBOSOME AT 5.5 A RESOLUTION.
Descriptor:30S 16S RIBOSOMAL RNA, TRNA(PHE), A- AND P-SITE MESSENGER RNA CODONS, ...
Authors:Yusupov, M.M., Yusupova, G.Z., Baucom, A., Lieberman, K., Earnest, T.N., Cate, J.H.D., Noller, H.F.
Deposit date:2001-03-30
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Crystal structure of the ribosome at 5.5 A resolution
Science, 292, 2001
4V4I
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CRYSTAL STRUCTURE OF A 70S RIBOSOME-TRNA COMPLEX REVEALS FUNCTIONAL INTERACTIONS AND REARRANGEMENTS.
Descriptor:23S LARGE SUBUNIT RIBOSOMAL RNA, 5S LARGE SUBUNIT RIBOSOMAL RNA, 50S ribosomal protein L1, ...
Authors:Korostelev, A., Trakhanov, S., Laurberg, M., Noller, H.F.
Deposit date:2007-02-15
Release date:2014-07-09
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements
Cell(Cambridge,Mass.), 126, 2006
4V4J
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INTERACTIONS AND DYNAMICS OF THE SHINE-DALGARNO HELIX IN THE 70S RIBOSOME.
Descriptor:23S LARGE SUBUNIT RIBOSOMAL RNA, 5S LARGE SUBUNIT RIBOSOMAL RNA, 50S ribosomal protein L1, ...
Authors:Korostelev, A., Trakhanov, S., Asahara, H., Laurberg, M., Noller, H.F.
Deposit date:2007-07-18
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.83 Å)
Cite:Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4V63
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STRUCTURAL BASIS FOR TRANSLATION TERMINATION ON THE 70S RIBOSOME.
Descriptor:16S RRNA, P and E-site tRNA(fMet), mRNA, ...
Authors:Laurberg, M., Asahara, H., Korostelev, A., Zhu, J., Trakhanov, S., Noller, H.F.
Deposit date:2008-05-16
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.207 Å)
Cite:Structural basis for translation termination on the 70S ribosome
Nature, 454, 2008
4V67
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CRYSTAL STRUCTURE OF A TRANSLATION TERMINATION COMPLEX FORMED WITH RELEASE FACTOR RF2.
Descriptor:16S RRNA, P AND E-SITE TRNA(FMET), MRNA, ...
Authors:Korostelev, A., Asahara, H., Lancaster, L., Laurberg, M., Hirschi, A., Noller, H.F.
Deposit date:2008-10-27
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a translation termination complex formed with release factor RF2.
Proc.Natl.Acad.Sci.USA, 105, 2008
4V7B
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VISUALIZATION OF TWO TRNAS TRAPPED IN TRANSIT DURING EF-G-MEDIATED TRANSLOCATION
Descriptor:16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Ramrath, D.J.F., Lancaster, L., Sprink, T., Mielke, T., Loerke, J., Noller, H.F., Spahn, C.M.T.
Deposit date:2013-10-27
Release date:2014-07-09
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4V7P
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RECOGNITION OF THE AMBER STOP CODON BY RELEASE FACTOR RF1.
Descriptor:16S rRNA (1504-MER), 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Korostelev, A., Zhu, J., Asahara, H., Noller, H.F.
Deposit date:2010-04-29
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.62 Å)
Cite:Recognition of the amber UAG stop codon by release factor RF1.
Embo J., 29, 2010
4V83
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CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 FROM THE PSIV IGR IRES RNA BOUND TO THE 70S RIBOSOME.
Descriptor:ribosomal RNA 16S, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhu, J., Korostelev, A., Costantino, D., Noller, H.F., Kieft, J.S.
Deposit date:2010-12-13
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
Proc.Natl.Acad.Sci.USA, 108, 2011
4V84
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CRYSTAL STRUCTURE OF A COMPLEX CONTAINING DOMAIN 3 OF CRPV IGR IRES RNA BOUND TO THE 70S RIBOSOME.
Descriptor:ribosomal RNA 16S, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhu, J., Korostelev, A., Costantino, D., Noller, H.F., Kieft, J.S.
Deposit date:2010-12-13
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.
Proc.Natl.Acad.Sci.USA, 108, 2011
4V85
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CRYSTAL STRUCTURE OF RELEASE FACTOR RF3 TRAPPED IN THE GTP STATE ON A ROTATED CONFORMATION OF THE RIBOSOME.
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhou, J., Lancaster, L., Trakhanov, S., Noller, H.F.
Deposit date:2011-06-13
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
4V89
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CRYSTAL STRUCTURE OF RELEASE FACTOR RF3 TRAPPED IN THE GTP STATE ON A ROTATED CONFORMATION OF THE RIBOSOME (WITHOUT VIOMYCIN)
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Zhou, J., Lancaster, L., Trakhanov, S., Noller, H.F.
Deposit date:2011-11-17
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
4V9J
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70S RIBOSOME TRANSLOCATION INTERMEDIATE GDPNP-II CONTAINING ELONGATION FACTOR EFG/GDPNP, MRNA, AND TRNA BOUND IN THE PE*/E STATE.
Descriptor:30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Zhou, J., Lancaster, L., Donohue, J.P., Noller, H.F.
Deposit date:2013-04-23
Release date:2014-07-09
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (3.86 Å)
Cite:Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Science, 340, 2013
4V9K
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70S RIBOSOME TRANSLOCATION INTERMEDIATE GDPNP-I CONTAINING ELONGATION FACTOR EFG/GDPNP, MRNA, AND TRNA BOUND IN THE PE*/E STATE.
Descriptor:30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Zhou, J., Lancaster, L., Donohue, J.P., Noller, H.F.
Deposit date:2013-04-24
Release date:2014-07-09
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Science, 340, 2013
4V9L
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70S RIBOSOME TRANSLOCATION INTERMEDIATE FA-3.6A CONTAINING ELONGATION FACTOR EFG/FUSIDIC ACID/GDP, MRNA, AND TRNA BOUND IN THE PE*/E STATE.
Descriptor:30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Zhou, J., Lancaster, L., Donohue, J.P., Noller, H.F.
Deposit date:2013-04-24
Release date:2014-07-09
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Science, 340, 2013
4V9M
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70S RIBOSOME TRANSLOCATION INTERMEDIATE FA-4.2A CONTAINING ELONGATION FACTOR EFG/FUSIDIC ACID/GDP, MRNA, AND TRNA BOUND IN THE PE*/E STATE.
Descriptor:30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Zhou, J., Lancaster, L., Donohue, J.P., Noller, H.F.
Deposit date:2013-04-25
Release date:2014-07-09
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.
Science, 340, 2013
4V9N
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CRYSTAL STRUCTURE OF THE 70S RIBOSOME BOUND WITH THE Q253P MUTANT OF RELEASE FACTOR RF2.
Descriptor:16S rRNA (1504-MER), messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3'), P-site tRNA-fMet, ...
Authors:Santos, N., Zhu, J., Donohue, J.P., Korostelev, A.A., Noller, H.F.
Deposit date:2013-04-26
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2.
Structure, 21, 2013
4W29
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70S RIBOSOME TRANSLOCATION INTERMEDIATE CONTAINING ELONGATION FACTOR EFG/GDP/FUSIDIC ACID, MRNA, AND TRNAS TRAPPED IN THE AP/AP PE/E CHIMERIC HYBRID STATE.
Descriptor:30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ...
Authors:Zhou, J., Lancaster, L., Donohue, J.P., Noller, H.F.
Deposit date:2014-07-02
Release date:2014-10-01
Last modified:2017-05-31
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:How the ribosome hands the A-site tRNA to the P site during EF-G-catalyzed translocation.
Science, 345, 2014
4XEJ
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IRES BOUND TO BACTERIAL RIBOSOME
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Zhu, J., Korostelev, A., Noller, H.F., Donohue, J.P.
Deposit date:2014-12-23
Release date:2015-02-25
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Initiation of translation in bacteria by a structured eukaryotic IRES RNA.
Nature, 519, 2015
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