Author results

1SMA
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CRYSTAL STRUCTURE OF A MALTOGENIC AMYLASE
Descriptor:MALTOGENIC AMYLASE
Authors:Kim, J.S., Cha, S.S., Oh, B.H.
Deposit date:1999-04-21
Release date:2000-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a maltogenic amylase provides insights into a catalytic versatility.
J.Biol.Chem., 274, 1999
1T6S
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CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN FROM CHLOROBIUM TEPIDUM
Descriptor:conserved hypothetical protein, NITRATE ION
Authors:Kim, J.S., Shin, D.H., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-12-07
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of ScpB from Chlorobium tepidum, a protein involved in chromosome partitioning.
Proteins, 62, 2006
1YF2
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THREE-DIMENSIONAL STRUCTURE OF DNA SEQUENCE SPECIFICITY (S) SUBUNIT OF A TYPE I RESTRICTION-MODIFICATION ENZYME AND ITS FUNCTIONAL IMPLICATIONS
Descriptor:Type I restriction-modification enzyme, S subunit
Authors:Kim, J.S., Degiovanni, A., Jancarik, J., Adams, P.D., Yokota, H.A., Kim, R., Kim, S.H., Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-12-30
Release date:2005-02-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications.
Proc.Natl.Acad.Sci.USA, 102, 2005
5CHI
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CRYSTAL STRUCTURE OF PF2046 IN COMPLEX WITH SSDNA
Descriptor:Uncharacterized protein, DNA (5'-D(P*TP*TP*TP*T)-3'), MAGNESIUM ION
Authors:Kim, J.S., Hwang, K.Y., Lee, W.C.
Deposit date:2015-07-10
Release date:2016-08-10
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural basis of two-nucleotide removal of ssDNA by a cryptic RNase H fold 3'-5' exonuclease PF2046 from Pyrococcus furiosus
to be published
1R6V
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CRYSTAL STRUCTURE OF FERVIDOLYSIN FROM FERVIDOBACTERIUM PENNIVORANS, A KERATINOLYTIC ENZYME RELATED TO SUBTILISIN
Descriptor:subtilisin-like serine protease, CALCIUM ION
Authors:Kim, J.S., Kluskens, L.D., de Vos, W.M., Huber, R., van der Oost, J.
Deposit date:2003-10-17
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.
J.Mol.Biol., 335, 2004
4QA8
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CRYSTAL STRUCTURE OF LPRF FROM MYCOBACTERIUM BOVIS
Descriptor:Putative lipoprotein LprF, (2R)-2-(dodecanoyloxy)propyl (4E,6E,8E,10E,12E)-pentadeca-4,6,8,10,12-pentaenoate
Authors:Ha, N.C., Jiao, L., Kim, J.S.
Deposit date:2014-05-02
Release date:2014-10-22
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure and functional implications of LprF from Mycobacterium tuberculosis and M. bovis
Acta Crystallogr.,Sect.D, 70, 2014
4WFQ
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CRYSTAL STRUCTURE OF TFIIH SUBUNIT
Descriptor:Suppressor of stem-loop protein 1, SULFATE ION, GLYCEROL
Authors:Cho, Y., Kim, J.S., Lim, H.S.
Deposit date:2014-09-17
Release date:2015-02-18
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Rad3/XPD regulatory domain of Ssl1/p44
J.Biol.Chem., 290, 2015
5BZA
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CRYSTAL STRUCTURE OF CBSA FROM THERMOTOGA NEAPOLITANA
Descriptor:Beta-N-acetylhexosaminidase, CADMIUM ION
Authors:Ha, N.C., Kim, J.S., Yoon, B.Y.
Deposit date:2015-06-11
Release date:2015-09-16
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
5C0Q
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CRYSTAL STRUCTURE OF ZN BOUND CBSA FROM THERMOTOGA NEAPOLITANA
Descriptor:Beta-N-acetylhexosaminidase, ZINC ION
Authors:Ha, N.C., Kim, J.S., Yoon, B.Y.
Deposit date:2015-06-12
Release date:2015-09-16
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structure of beta-N-acetylglucosaminidase CbsA from Thermotoga neapolitana
Biochem.Biophys.Res.Commun., 464, 2015
5C21
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CRYSTAL STRUCTURE OF NATIVE HLYD FROM E. COLI
Descriptor:Chromosomal hemolysin D
Authors:Ha, N.C., Kim, J.S., Yoon, B.Y.
Deposit date:2015-06-15
Release date:2016-02-17
Last modified:2016-03-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
5C22
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CRYSTAL STRUCTURE OF ZN-BOUND HLYD FROM E. COLI
Descriptor:Chromosomal hemolysin D, ZINC ION
Authors:Ha, N.C., Kim, J.S.
Deposit date:2015-06-15
Release date:2016-02-17
Last modified:2016-03-16
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
6AE3
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CRYSTAL STRUCTURE OF GSK3BETA COMPLEXED WITH MORIN
Descriptor:Glycogen synthase kinase-3 beta, 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, GLYCEROL
Authors:Kim, K.L., Cha, J.S., Kim, J.S., Ahn, J.S., Ha, N.C., Cho, H.S.
Deposit date:2018-08-03
Release date:2018-09-19
Last modified:2018-10-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of GSK3 beta in complex with the flavonoid, morin
Biochem. Biophys. Res. Commun., 504, 2018
3CRA
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI MAZG, THE REGULATOR OF NUTRITIONAL STRESS RESPONSE
Descriptor:Protein mazG
Authors:Lee, S., Kim, M.H., Kang, B.S., Kim, J.S., Kim, Y.G., Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
3CRC
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI MAZG, THE REGULATOR OF NUTRITIONAL STRESS RESPONSE
Descriptor:Protein mazG, MAGNESIUM ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Lee, S., Kim, M.H., Kang, B.S., Kim, J.S., Kim, Y.G., Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
2GKI
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HEAVY AND LIGHT CHAIN VARIABLE SINGLE DOMAINS OF AN ANTI-DNA BINDING ANTIBODY HYDROLYZE BOTH DOUBLE- AND SINGLE-STRANDED DNAS WITHOUT SEQUENCE SPECIFICITY
Descriptor:nuclease
Authors:Kim, Y.R., Kim, J.S., Lee, S.H., Lee, W.R., Sohn, J.N., Chung, Y.C., Shim, H.K., Lee, S.C., Kwon, M.H., Kim, Y.S.
Deposit date:2006-04-02
Release date:2006-04-18
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Heavy and light chain variable single domains of an anti-DNA binding antibody hydrolyze both double- and single-stranded DNAs without sequence specificity.
J.Biol.Chem., 281, 2006
3TIO
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CRYSTAL STRUCTURES OF YRDA FROM ESCHERICHIA COLI, A HOMOLOGOUS PROTEIN OF GAMMA-CLASS CARBONIC ANHYDRASE, SHOW POSSIBLE ALLOSTERIC CONFORMATIONS
Descriptor:Protein YrdA, ZINC ION, PHOSPHATE ION
Authors:Park, H.M., Choi, J.W., Lee, J.E., Jung, C.H., Kim, B.Y., Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
3TIS
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CRYSTAL STRUCTURES OF YRDA FROM ESCHERICHIA COLI, A HOMOLOGOUS PROTEIN OF GAMMA-CLASS CARBONIC ANHYDRASES, SHOW POSSIBLE ALLOSTERIC CONFORMATIONS
Descriptor:Protein YrdA, ZINC ION
Authors:Park, H.M., Chio, J.W., Lee, J.E., Jung, J.H., Kim, B.Y., Kim, J.S.
Deposit date:2011-08-21
Release date:2012-08-01
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the gamma-class carbonic anhydrase homologue YrdA suggest a possible allosteric switch
Acta Crystallogr.,Sect.D, 68, 2012
3UFC
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CHARACTERIZATION OF A CAS6-RELATED GENE FROM PYROCOCCUS FURIOSUS
Descriptor:Putative uncharacterized protein
Authors:Park, H.M., Kim, J.S.
Deposit date:2011-11-01
Release date:2012-03-21
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a Cas6 paralogous protein from Pyrococcus furiosus
Proteins, 80, 2012
4MIR
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THE STRUCTURE OF BRUCELLA ABORTUS PLIC IN THE HEXAGONAL CRYSTAL FORM
Descriptor:Putative uncharacterized protein
Authors:Ha, N.C., Um, S.H., Kim, J.S.
Deposit date:2013-09-02
Release date:2014-07-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the inhibition of human lysozyme by PliC from Brucella abortus
Biochemistry, 52, 2013
4MIS
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THE STRUCTURE OF BRUCELLA ABORTUS PLIC IN THE ORTHOROMBIC CRYSTAL FORM
Descriptor:Putative uncharacterized protein
Authors:Ha, N.C., Um, S.H., Kim, J.S.
Deposit date:2013-09-02
Release date:2014-07-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the inhibition of human lysozyme by PliC from Brucella abortus
Biochemistry, 52, 2013
4ML7
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CRYSTAL STRUCTURE OF BRUCELLA ABORTUS PLIC IN COMPLEX WITH HUMAN LYSOZYME
Descriptor:Lysozyme C, Humanlysozyme
Authors:Ha, N.C., Um, S.H., Kim, J.S.
Deposit date:2013-09-06
Release date:2014-07-23
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Inhibition of Human Lysozyme by PliC from Brucella abortus
Biochemistry, 52, 2013
4N06
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CRYSTAL STRUCTURE OF CAS1 FROM ARCHAEOGLOBUS FULGIDUS AND ITS NUCLEOLYTIC ACTIVITY
Descriptor:CRISPR-associated endonuclease Cas1 1
Authors:Kim, T.Y., Shin, M., Yen, L.H.T., Kim, J.S.
Deposit date:2013-10-01
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity
Biochem.Biophys.Res.Commun., 441, 2013
3BD3
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CRYSTAL STRUCTURE OF SINGLE DOMAIN VL OF AN ANTI-DNA BINDING ANTIBODY 3D8 SCFV AND ITS ACTIVE SITE REVEALED BY COMPLEX STRUCTURES OF A SMALL MOLECULE AND METALS
Descriptor:catalytic antibody, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:Park, S.K., Kim, J.S.
Deposit date:2007-11-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of single-domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals
Proteins, 71, 2008
3BD4
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CRYSTAL STRUCTURE OF SINGLE DOMAIN VL OF AN ANTI-DNA BINDING ANTIBODY 3D8 SCFV AND ITS ACTIVE SITE REVEALED BY COMPLEX STRUCTURES OF A SMALL MOLECULE AND METALS
Descriptor:catalytic antibody, CADMIUM ION, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:Park, S.K., Kim, J.S.
Deposit date:2007-11-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of single-domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals
Proteins, 71, 2008
3BD5
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CRYSTAL STRUCTURE OF SINGLE DOMAIN VL OF AN ANTI-DNA BINDING ANTIBODY 3D8 SCFV AND ITS ACTIVE SITE REVEALED BY COMPLEX STRUCTURES OF A SMALL MOLECULE AND METALS
Descriptor:catalytic antibody, COBALT (II) ION, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
Authors:Park, S.K., Kim, J.S.
Deposit date:2007-11-14
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of single-domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals
Proteins, 71, 2008