Author results

1Y90
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HIV-1 DIS(MAL) DUPLEX MN-SOAKED
Descriptor:5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MANGANESE (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-14
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
4NXH
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2'-TRIFLUOROMETHYLTHIOURIDINE-MODIFIED E. COLI 23S RRNA SARCIN RICIN LOOP
Descriptor:23S ribosomal RNA Sarcin Ricin Loop, GLYCEROL, SULFATE ION
Authors:Ennifar, E., Micura, R., Kosutic, M.
Deposit date:2013-12-09
Release date:2014-12-10
Method:X-RAY DIFFRACTION (1.158 Å)
Cite:2'-Trifluoromethylthio-modified RNA: synthesis, X-ray structure, thermodynamic analysis, and applications
To be Published
1F7Y
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THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
Descriptor:16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ...
Authors:Ennifar, E., Nikouline, A., Serganov, A., Tishchenko, S., Nevskaya, N., Garber, M., Ehresmann, B., Ehresmann, C., Nikonov, S., Dumas, P.
Deposit date:2000-06-28
Release date:2000-11-22
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of UUCG tetraloop.
J.Mol.Biol., 304, 2000
1K9W
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HIV-1(MAL) RNA DIMERIZATION INITIATION SITE
Descriptor:HIV-1 DIS(Mal)UU RNA, MAGNESIUM ION
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2001-10-31
Release date:2001-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site.
Nat.Struct.Biol., 8, 2001
1NLC
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HIV-1 DIS(MAL) DUPLEX ZN-SOAKED
Descriptor:HIV-1 DIS(MAL) genomic RNA, ZINC ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2003-01-07
Release date:2003-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.
Nucleic Acids Res., 31, 2003
1NZB
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CRYSTAL STRUCTURE OF WILD TYPE CRE RECOMBINASE-LOXP SYNAPSE
Descriptor:loxP DNA, Cre recombinase, MAGNESIUM ION, ...
Authors:Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.
Deposit date:2003-02-17
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1O3Z
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HIV-1 DIS(MAL) DUPLEX RU HEXAMINE-SOAKED
Descriptor:HIV-1 DIS(MAL) GENOMIC RNA, MAGNESIUM ION, RUTHENIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2003-05-16
Release date:2003-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes.
Nucleic Acids Res., 31, 2003
1OUQ
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CRYSTAL STRUCTURE OF WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE
Descriptor:loxP DNA, Cre recombinase, IODIDE ION, ...
Authors:Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.
Deposit date:2003-03-25
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1Q3U
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CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PRE-CLEAVAGE COMPLEX
Descriptor:loxP DNA, Cre recombinase, IODIDE ION, ...
Authors:Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.
Deposit date:2003-08-01
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1Q3V
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CRYSTAL STRUCTURE OF A WILD-TYPE CRE RECOMBINASE-LOXP SYNAPSE: PHOSPHOTYROSINE COVALENT INTERMEDIATE
Descriptor:loxP DNA, Cre recombinase, IODIDE ION, ...
Authors:Ennifar, E., Meyer, J.E.W., Buchholz, F., Stewart, A.F., Suck, D.
Deposit date:2003-08-01
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1WVD
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HIV-1 DIS(MAL) DUPLEX COCL2-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1XP7
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HIV-1 SUBTYPE F GENOMIC RNA DIMERIZATION INITIATION SITE
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SULFATE ION, ...
Authors:Ennifar, E., Dumas, P.
Deposit date:2004-10-08
Release date:2005-10-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
1XPE
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HIV-1 SUBTYPE B GENOMIC RNA DIMERIZATION INITIATION SITE
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SODIUM ION, ...
Authors:Ennifar, E., Dumas, P.
Deposit date:2004-10-08
Release date:2005-10-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
1XPF
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HIV-1 SUBTYPE A GENOMIC RNA DIMERIZATION INITIATION SITE
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', SULFATE ION, MAGNESIUM ION, ...
Authors:Ennifar, E., Dumas, P.
Deposit date:2004-10-08
Release date:2005-10-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies
J.Mol.Biol., 356, 2006
1Y3O
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HIV-1 DIS RNA SUBTYPE F- MN SOAKED
Descriptor:5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MANGANESE (II) ION, SODIUM ION
Authors:Ennifar, E., Dumas, P.
Deposit date:2004-11-26
Release date:2005-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1Y3S
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HIV-1 DIS RNA SUBTYPE F- MPD FORM
Descriptor:5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', POTASSIUM ION, MAGNESIUM ION
Authors:Ennifar, E., Dumas, P.
Deposit date:2004-11-26
Release date:2005-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1Y6S
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HIV-1 DIS(MAL) DUPLEX BA-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', BARIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-07
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y6T
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HIV-1 DIS(MAL) DUPLEX CO HEXAMINE-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', COBALT (III) ION, SODIUM ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-07
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y73
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HIV-1 DIS(MAL) DUPLEX PT-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, PLATINUM (IV) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-08
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y95
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HIV-1 DIS(MAL) DUPLEX PB-SOAKED
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, LEAD (II) ION
Authors:Ennifar, E., Walter, P., Dumas, P.
Deposit date:2004-12-14
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A crystallographic study of the binding of 13 metal ions to two related RNA duplexes
Nucleic Acids Res., 31, 2003
1Y99
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HIV-1 SUBTYPE A DIS RNA DUPLEX
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION
Authors:Ennifar, E., Yusupov, M., Walter, P., Marquet, R., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2004-12-15
Release date:2004-12-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges
Structure Fold.Des., 7, 1999
1YXP
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HIV-1 DIS RNA SUBTYPE F- ZN SOAKED
Descriptor:5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', ZINC ION
Authors:Ennifar, E., Dumas, P.
Deposit date:2005-02-22
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
1ZCI
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HIV-1 DIS RNA SUBTYPE F- MONOCLINIC FORM
Descriptor:5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', POTASSIUM ION
Authors:Ennifar, E., Dumas, P.
Deposit date:2005-04-12
Release date:2006-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies.
J.Mol.Biol., 356, 2006
2B8R
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STRUCTURE OF HIV-1(LAI) GENOMIC RNA DIS
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SULFATE ION, ...
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2005-10-10
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site
Nat.Struct.Biol., 8, 2001
2B8S
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STRUCTURE OF HIV-1(MAL) GENOMIC RNA DIS
Descriptor:5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SULFATE ION, ...
Authors:Ennifar, E., Walter, P., Ehresmann, B., Ehresmann, C., Dumas, P.
Deposit date:2005-10-10
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal structures of coaxially stacked kissing complexes of the HIV-1 RNA dimerization initiation site
NAT.STRUCT.BIOL., 8, 2001