Author results

2D19
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SOLUTION RNA STRUCTURE OF LOOP REGION OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
Descriptor:5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3'
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1A
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE EXTENDED-DUPLEX DIMER
Descriptor:RNA
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2D1B
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SOLUTION RNA STRUCTURE MODEL OF THE HIV-1 DIMERIZATION INITIATION SITE IN THE KISSING-LOOP DIMER
Descriptor:RNA
Authors:Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Deposit date:2005-08-15
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers.
J.Biochem.(Tokyo), 138, 2005
2FDT
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SOLUTION STRUCTURE OF A CONSERVED RNA HAIRPIN OF EEL LINE UNAL2
Descriptor:36-mer
Authors:Nomura, Y., Baba, S., Nakazato, S., Sakamoto, T., Kajikawa, M., Okada, N., Kawai, G.
Deposit date:2005-12-14
Release date:2006-12-05
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2
Nucleic Acids Res., 34, 2006
2FYH
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SOLUTION STRUCTURE OF THE 2'-5' RNA LIGASE-LIKE PROTEIN FROM PYROCOCCUS FURIOSUS
Descriptor:putative integral membrane transport protein
Authors:Okada, K., Matsuda, T., Sakamoto, T., Muto, Y., Yokoyama, S., Kanai, A., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-08
Release date:2007-02-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Characterization of a heat-stable enzyme possessing GTP-dependent RNA ligase activity from a hyperthermophilic archaeon, Pyrococcus furiosus
Rna, 15, 2009
2RRC
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SOLUTION STRUCTURE OF RNA APTAMER AGAINST AML1 RUNT DOMAIN
Descriptor:5'-R(P*GP*GP*AP*CP*CP*CP*(AP7)P*CP*CP*AP*CP*GP*GP*CP*GP*AP*GP*GP*UP*CP*CP*A)-3'
Authors:Nomura, Y., Fujiwara, K., Chiba, M., Fukunaga, J., Tanaka, Y., Iibuchi, H., Tanaka, T., Nakamura, Y., Kawai, G., Kozu, T., Sakamoto, T.
Deposit date:2010-06-23
Release date:2011-06-29
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:A novel high affinity RNA motif that mimics DNA in AML1 Runt domain binding
To be Published
2RVO
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SOLUTION STRUCTURE OF A REVERSE TRANSCRIPTASE RECOGNITION SITE OF A LINE RNA FROM ZEBRAFISH
Descriptor:RNA (34-MER)
Authors:Otsu, M., Norose, N., Arai, N., Terao, R., Kajikawa, M., Okada, N., Kawai, G.
Deposit date:2016-02-03
Release date:2017-02-08
Last modified:2017-11-15
Method:SOLUTION NMR
Cite:Solution structure of a reverse transcriptase recognition site of a LINE RNA from zebrafish.
J. Biochem., 162, 2017
2F87
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SOLUTION STRUCTURE OF A GAAG TETRALOOP IN SRP RNA FROM PYROCOCCUS FURIOSUS
Descriptor:SRP RNA
Authors:Okada, K., Takahashi, M., Sakamoto, T., Nakamura, K., Kanai, A., Kawai, G
Deposit date:2005-12-02
Release date:2006-08-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a GAAG tetraloop in helix 6 of SRP RNA from Pyrococcus furiosus
Nucleosides Nucleotides Nucleic Acids, 25, 2006
2DGB
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STRUCTURE OF THERMUS THERMOPHILUS PURS IN THE P21 FORM
Descriptor:hypothetical protein PurS
Authors:Yanai, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-10
Release date:2006-09-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Thermus thermophilus PurS, One of the Subunits of Formylglycinamide Ribonucleotide Amidotransferase in the Purine Biosynthetic Pathway
To be published
4P6A
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CRYSTAL STRUCTURE OF A POTENT ANTI-HIV LECTIN ACTINOHIVIN IN COMPLEX WITH ALPHA-1,2-MANNOTRIOSE
Descriptor:Actinohivin, ALPHA-D-MANNOSE
Authors:Zhang, F., Hoque, M.M., Suzuki, K., Tsunoda, M., Naomi, O., Tanaka, H., Takenaka, A.
Deposit date:2014-03-23
Release date:2015-03-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:The characteristic structure of anti-HIV actinohivin in complex with three HMTG D1 chains of HIV-gp120.
Chembiochem, 15, 2014
5B4T
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CRYSTAL STRUCTURE OF D-3-HYDROXYBUTYRATE DEHYDROGENASE FROM ALCALIGENES FAECALIS COMPLEXED WITH NAD+ AND A SUBSTRATE D-3-HYDROXYBUTYRATE
Descriptor:3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, (3R)-3-hydroxybutanoic acid, ...
Authors:Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016
5B4U
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CRYSTAL STRUCTURE OF D-3-HYDROXYBUTYRATE DEHYDROGENASE FROM ALCALIGENES FAECALIS COMPLEXED WITH NAD+ AND AN INHIBITOR MALONATE
Descriptor:3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, MALONIC ACID, ...
Authors:Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016
5B4V
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CRYSTAL STRUCTURE OF D-3-HYDROXYBUTYRATE DEHYDROGENASE FROM ALCALIGENES FAECALIS COMPLEXED WITH NAD+ AND AN INHIBITOR METHYLMALONATE
Descriptor:3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, METHYLMALONIC ACID, ...
Authors:Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
Deposit date:2016-04-19
Release date:2016-08-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase
Acta Crystallogr.,Sect.F, 72, 2016
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