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2X2F
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BU of 2x2f by Molmil
Dynamin 1 GTPase dimer, short axis form
Descriptor: DYNAMIN-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chappie, J.S, Acharya, S, Leonard, M, Schmid, S.L, Dyda, F.
Deposit date:2010-01-13
Release date:2010-04-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:G Domain Dimerization Controls Dynamin'S Assembly-Stimulated Gtpase Activity.
Nature, 465, 2010
3ZYC
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BU of 3zyc by Molmil
DYNAMIN 1 GTPASE GED FUSION DIMER COMPLEXED WITH GMPPCP
Descriptor: DYNAMIN-1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Chappie, J.S, Mears, J.A, Fang, S, Leonard, M, Schmid, S.L, Milligan, R.A, Hinshaw, J.E, Dyda, F.
Deposit date:2011-08-22
Release date:2011-10-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Pseudoatomic Model of the Dynamin Polymer Identifies a Hydrolysis-Dependent Powerstroke.
Cell(Cambridge,Mass.), 147, 2011
3ZYS
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BU of 3zys by Molmil
Human dynamin 1 deltaPRD polymer stabilized with GMPPCP
Descriptor: DYNAMIN-1, INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
Authors:Chappie, J.S, Mears, J.A, Fang, S, Leonard, M, Schmid, S.L, Milligan, R.A, Hinshaw, J.E, Dyda, F.
Deposit date:2011-08-24
Release date:2011-10-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (12.2 Å)
Cite:A Pseudoatomic Model of the Dynamin Polymer Identifies a Hydrolysis-Dependent Powerstroke.
Cell(Cambridge,Mass.), 147, 2011
2X2E
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BU of 2x2e by Molmil
Dynamin GTPase dimer, long axis form
Descriptor: DYNAMIN-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chappie, J.S, Acharya, S, Leonard, M, Schmid, S.L, Dyda, F.
Deposit date:2010-01-12
Release date:2010-04-28
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:G Domain Dimerization Controls Dynamin'S Assembly-Stimulated Gtpase Activity.
Nature, 465, 2010
6P74
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BU of 6p74 by Molmil
OLD nuclease from Thermus Scotoductus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PLATINUM (II) ION, Putative ATP-dependent endonuclease of the OLD family, ...
Authors:Chappie, J.S, Schiltz, C.J.
Deposit date:2019-06-04
Release date:2020-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The full-length structure of Thermus scotoductus OLD defines the ATP hydrolysis properties and catalytic mechanism of Class 1 OLD family nucleases.
Nucleic Acids Res., 48, 2020
4V9D
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BU of 4v9d by Molmil
Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Dunkle, J.A, Wang, L, Feldman, M.B, Pulk, A, Chen, V.B, Kapral, G.J, Noeske, J, Richardson, J.S, Blanchard, S.C, Cate, J.H.D.
Deposit date:2012-07-31
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of the bacterial ribosome in classical and hybrid states of tRNA binding.
Science, 332, 2011
4UUK
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BU of 4uuk by Molmil
Human dynamin 1 K44A superconstricted polymer stabilized with GTP strand 2
Descriptor: DYNAMIN-1
Authors:Sundborger, A.C, Fang, S, Heymann, J.A, Ray, P, Chappie, J.S, Hinshaw, J.E.
Deposit date:2014-07-29
Release date:2014-08-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:A Dynamin Mutant Defines a Superconstricted Prefission State.
Cell Rep., 8, 2014
2XT2
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BU of 2xt2 by Molmil
Structure of the pentapeptide repeat protein AlbG, a resistance factor for the topoisomerase poison albicidin.
Descriptor: MCBG-LIKE PROTEIN, SULFATE ION
Authors:Vetting, M.W, Hegde, S.S, Blanchard, J.S.
Deposit date:2010-10-05
Release date:2010-10-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Pentapeptide-Repeat Proteins that Act as Topoisomerase Poison Resistance Factors Have a Common Dimer Interface.
Acta Crystallogr.,Sect.F, 67, 2011
2XTY
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BU of 2xty by Molmil
Structure of QnrB1 (R167E-Trypsin Treated), a plasmid-mediated fluoroquinolone resistance protein
Descriptor: QNRB1
Authors:Vetting, M.W, Hegde, S.S, Park, C.H, Jacoby, G.A, Hooper, D.C, Blanchard, J.S.
Deposit date:2010-10-13
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Qnrb1, a Plasmid-Mediated Fluoroquinolone Resistance Factor.
J.Biol.Chem., 286, 2011
6VJF
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BU of 6vjf by Molmil
The P-Loop K to A mutation of C. therm Vps1 GTPase-BSE
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Putative sorting protein Vps1
Authors:Tornabene, B.A, Varlakhanova, N.V, Chappie, J.S, Ford, M.G.J.
Deposit date:2020-01-15
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural and functional characterization of the dominant negative P-loop lysine mutation in the dynamin superfamily protein Vps1.
Protein Sci., 29, 2020
6P0F
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BU of 6p0f by Molmil
N-terminal domain of Thermococcus Gammatolerans McrB
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, GTPase subunit of restriction endonuclease, ...
Authors:Hosford, C.J, Chappie, J.S.
Deposit date:2019-05-17
Release date:2019-12-18
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.683 Å)
Cite:The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs.
J.Biol.Chem., 295, 2020
6P0G
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BU of 6p0g by Molmil
N-terminal domain of Thermococcus Gammatolerans McrB bound to m5C DNA
Descriptor: DNA (5'-D(P*AP*CP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*AP*CP*CP*GP*G)-3'), GTPase subunit of restriction endonuclease
Authors:Hosford, C.J, Chappie, J.S.
Deposit date:2019-05-17
Release date:2019-12-18
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The structure of theThermococcus gammatoleransMcrB N-terminal domain reveals a new mode of substrate recognition and specificity among McrB homologs.
J.Biol.Chem., 295, 2020
5FJG
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BU of 5fjg by Molmil
The crystal structure of light-driven chloride pump ClR in pH 4.5.
Descriptor: ANHYDRORETINOL, CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2015-10-07
Release date:2016-11-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Light-Driven Chloride Pump Clr in Ph 4.5.
To be Published
5G2A
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BU of 5g2a by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion.
Descriptor: BROMIDE ION, CHLORIDE PUMPING RHODOPSIN, RETINAL
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G54
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BU of 5g54 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 4.5
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-05-19
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G28
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BU of 5g28 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0.
Descriptor: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2D
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BU of 5g2d by Molmil
The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5.
Descriptor: CHLORIDE ION, CHLORIDE PUMP RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2C
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BU of 5g2c by Molmil
The crystal structure of light-driven chloride pump ClR (T102D) mutant at pH 4.5.
Descriptor: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
4UUD
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BU of 4uud by Molmil
Human dynamin 1 K44A superconstricted polymer stabilized with GTP
Descriptor: DYNAMIN-1
Authors:Sundborger, A.C, Fang, S, Heymann, J.A, Ray, P, Chappie, J.S, Hinshaw, J.E.
Deposit date:2014-07-25
Release date:2014-08-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:A Dynamin Mutant Defines a Superconstricted Prefission State.
Cell Rep., 8, 2014
5Y86
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BU of 5y86 by Molmil
Crystal structure of kinase
Descriptor: 1,2-ETHANEDIOL, 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 3, ...
Authors:Kim, K.L, Cha, J.S, Cho, Y.S, Kim, H.Y, Chang, N.P, Cho, H.S.
Deposit date:2017-08-18
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Human Dual-Specificity Tyrosine-Regulated Kinase 3 Reveals New Structural Features and Insights into its Auto-phosphorylation
J. Mol. Biol., 430, 2018
6KF4
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BU of 6kf4 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-06
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6LBX
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BU of 6lbx by Molmil
Crystal structure of HER2 Domain IV and Rb-H2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-2, Repebody (Rb-H2)
Authors:Cho, H.S, Cha, J.S.
Deposit date:2019-11-15
Release date:2020-11-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Computationally-guided design and affinity improvement of a protein binder targeting a specific site on HER2
Comput Struct Biotechnol J, 19, 2021
6KF9
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BU of 6kf9 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA (27-MER), DNA (5'-D(P*TP*CP*GP*GP*TP*AP*AP*TP*CP*AP*CP*GP*CP*TP*CP*C)-3'), DNA-directed RNA polymerase subunit, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-07
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6KF3
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BU of 6kf3 by Molmil
Cryo-EM structure of Thermococcus kodakarensis RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Hyun, J, Jeong, H, Cha, J.S, Kim, H, Bartlett, M.S, Cho, H.-S, Murakami, K.S.
Deposit date:2019-07-06
Release date:2020-07-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
7E5B
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BU of 7e5b by Molmil
Crystal structure of ASC PYD Domain and Rb-B7
Descriptor: Apoptosis-associated speck-like protein containing a CARD, GLYCEROL, Repebody (Rb-B7)
Authors:Cho, H.S, Cha, J.S.
Deposit date:2021-02-18
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Oligomeric states of ASC specks regulate inflammatory responses by inflammasome in the extracellular space.
Cell Death Discov, 9, 2023

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