PDB: 129 件ウェブページステータス検索Chemie searchBIRD

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2VDI	Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit C192S mutation 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Garcia-Murria, M.-J, Karkehabadi, S, Marin-Navarro, J, Satagopan, S, Andersson, I, Spreitzer, R.J, Moreno, J. 登録日 2007-10-09 公開日 2008-11-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural and Functional Consequences of the Replacement of Proximal Residues Cys-172 and Cys-192 in the Large Subunit of Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase from Chlamydomonas Reinhardtii Biochem.J., 411, 2008
3FK4	Crystal structure of RuBisCO-like protein from Bacillus Cereus ATCC 14579 分子名称: RuBisCO-like protein 著者 Fedorov, A.A, Fedorov, E.V, Imker, H.J, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2008-12-15 公開日 2009-01-13 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of RuBisCO-like protein from Bacillus Cereus ATCC 14579 To be Published
2ZVI	Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis 分子名称: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 著者 Tamura, H, Yadani, T, Kai, Y, Inoue, T, Matsumura, H. 登録日 2008-11-07 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the apo decarbamylated form of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis Acta Crystallogr.,Sect.D, 65, 2009
2WVW	Cryo-EM structure of the RbcL-RbcX complex 分子名称: RBCX PROTEIN, RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN 著者 Liu, C, Young, A.L, Starling-Windhof, A, Bracher, A, Saschenbrecker, S, Rao, B.V, Rao, K.V, Berninghausen, O, Mielke, T, Hartl, F.U, Beckmann, R, Hayer-Hartl, M. 登録日 2009-10-20 公開日 2010-01-19 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Coupled Chaperone Action in Folding and Assembly of Hexadecameric Rubisco Nature, 463, 2010
3A13	Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP and activated with Ca 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ... 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-03-25 公開日 2010-04-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structure-based optimization of a Type III Rubisco from a hyperthermophile To be Published
3A12	Crystal structure of Type III Rubisco complexed with 2-CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-03-25 公開日 2010-04-07 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010
3NWR	Crystal structure of a rubisco-like protein from Burkholderia fungorum 分子名称: A rubisco-like protein, GLYCEROL, SULFATE ION 著者 Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C. 登録日 2010-07-10 公開日 2010-07-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.498 Å) 主引用文献 Crystal structure of a rubisco-like protein from Burkholderia fungorum To be Published
3KDO	Crystal structure of Type III Rubisco SP6 mutant complexed with 2-CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-10-23 公開日 2010-10-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010
3KDN	Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K. 登録日 2009-10-23 公開日 2010-10-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010
3RG6	Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco 分子名称: RbcX protein, Ribulose bisphosphate carboxylase large chain 著者 Bracher, A, Starling-Windhof, A, Hartl, F.U, Hayer-Hartl, M. 登録日 2011-04-07 公開日 2011-07-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco. Nat.Struct.Mol.Biol., 18, 2011
2YBV	STRUCTURE OF RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS 分子名称: CHLORIDE ION, RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN, RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL SUBUNIT 著者 Terlecka, B, Wilhelmi, V, Bialek, W, Gubernator, B, Szczepaniak, A, Hofmann, E. 登録日 2011-03-10 公開日 2012-03-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase from Thermosynechococcus Elongatus To be Published
3AXM	Structure of rice Rubisco in complex with 6PG 分子名称: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
3AXK	Structure of rice Rubisco in complex with NADP(H) 分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
3ZXW	STRUCTURE OF ACTIVATED RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Terlecka, B, Wilhelmi, V, Bialek, W, Gubernator, B, Szczepaniak, A, Hofmann, E. 登録日 2011-08-16 公開日 2012-08-29 最終更新日 2018-06-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase from Thermosynechococcus Elongatus To be Published
4HHH	Structure of Pisum sativum Rubisco 分子名称: RIBULOSE-1,5-DIPHOSPHATE, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain 著者 Loewen, P.C, Didychuk, A.L, Switala, J, Loewen, M.C. 登録日 2012-10-09 公開日 2012-10-31 最終更新日 2013-01-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of Pisum sativum Rubisco with bound ribulose 1,5-bisphosphate. Acta Crystallogr.,Sect.F, 69, 2013
4F0H	UNACTIVATED RUBISCO with OXYGEN BOUND 分子名称: OXYGEN MOLECULE, PHOSPHATE ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
4F0M	UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
4F0K	UNACTIVATED RUBISCO with MAGNESIUM AND CARBON DIOXIDE BOUND 分子名称: CARBON DIOXIDE, CHLORIDE ION, GLYCEROL, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
4MKV	Structure of Pisum sativum Rubisco with ABA 分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, PHOSPHATE ION, RIBULOSE-1,5-DIPHOSPHATE, ... 著者 Loewen, M.C, Loewen, P.C, Switala, J. 登録日 2013-09-05 公開日 2013-10-16 最終更新日 2019-11-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Identification of Interactions between Abscisic Acid and Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase. Plos One, 10, 2015
4NAS	The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 分子名称: CALCIUM ION, CHLORIDE ION, FORMIC ACID, ... 著者 Tan, K, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-10-22 公開日 2013-11-13 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 The crystal structure of a rubisco-like protein (MtnW) from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446. To be Published
4LF2	Hexameric Form II RuBisCO from Rhodopseudomonas palustris, activated and complexed with sulfate and magnesium 分子名称: CARBONATE ION, MAGNESIUM ION, Ribulose bisphosphate carboxylase, ... 著者 Chan, S, Satagopan, S, Sawaya, M.R, Eisenberg, D, Tabita, F.R, Perry, L.J. 登録日 2013-06-26 公開日 2014-06-25 最終更新日 2016-07-20 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Structure-function studies with the unique hexameric form II ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris. J.Biol.Chem., 289, 2014
4LF1	Hexameric Form II RuBisCO from Rhodopseudomonas palustris, activated and complexed with 2-CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase 著者 Chan, S, Satagopan, S, Sawaya, M.R, Eisenberg, D, Tabita, F.R, Perry, L.J. 登録日 2013-06-26 公開日 2014-06-25 最終更新日 2016-07-20 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Structure-function studies with the unique hexameric form II ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris. J.Biol.Chem., 289, 2014
3WQP	Crystal structure of Rubisco T289D mutant from Thermococcus kodakarensis 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Fujihashi, M, Nishitani, Y, Kiriyama, T, Miki, K. 登録日 2014-01-29 公開日 2015-02-04 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Mutation design of thermophilic Rubisco based on the three-dimensional structure enhances its activity at ambient temperature to be published
5C2C	GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (unliganded form) 分子名称: CHLORIDE ION, Form II RubisCO, MAGNESIUM ION 著者 Arbing, M.A, Varaljay, V.A, Satagopan, S, Tabita, F.R. 登録日 2015-06-15 公開日 2015-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria. Environ.Microbiol., 18, 2016
5C2G	GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (CABP-bound). 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Form II RubisCO, MAGNESIUM ION 著者 Arbing, M.A, Varaljay, V.A, Satagopan, S, Tabita, F.R. 登録日 2015-06-15 公開日 2015-12-16 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (2.597 Å) 主引用文献 Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria. Environ.Microbiol., 18, 2016

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