PDB: 125 件ウェブページステータス検索Chemie searchBIRD

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4TR7	Crystal structure of DNA polymerase sliding clamp from Mycobaterium tuberculosis 分子名称: DNA polymerase III subunit beta 著者 Olieric, V, Burnouf, D, Ennifar, E, Wolff, P. 登録日 2014-06-14 公開日 2014-09-10 最終更新日 2014-11-19 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins. J.Med.Chem., 57, 2014
3Q4J	Structure of a small peptide ligand bound to E.coli DNA sliding clamp 分子名称: DNA polymerase III subunit beta, peptide ligand 著者 Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D. 登録日 2010-12-23 公開日 2011-12-28 最終更新日 2013-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-based design of short peptide ligands binding onto the E. coli processivity ring. J.Med.Chem., 54, 2011
5G4Q	H.pylori Beta clamp in complex with 5-chloroisatin 分子名称: 5-chloro-1H-indole-2,3-dione, DNA POLYMERASE III SUBUNIT BETA 著者 Pandey, P, Gourinath, S. 登録日 2016-05-16 公開日 2017-06-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Screening of E. coli beta-clamp Inhibitors Revealed that Few Inhibit Helicobacter pylori More Effectively: Structural and Functional Characterization. Antibiotics (Basel), 7, 2018
4N99	E. coli sliding clamp in complex with 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid 分子名称: 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Yin, Z, Oakley, A.J. 登録日 2013-10-19 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Discovery of lead compounds targeting the bacterial sliding clamp using a fragment-based approach. J.Med.Chem., 57, 2014
5AH4	The sliding clamp of Mycobacterium smegmatis in complex with a natural product. 分子名称: CYCLOHEXYL GRISELIMYCIN, DNA POLYMERASE III SUBUNIT BETA, SODIUM ION 著者 Lukat, P, Kling, A, Heinz, D.W, Mueller, R. 登録日 2015-02-04 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.313 Å) 主引用文献 Antibiotics. Targeting Dnan for Tuberculosis Therapy Using Novel Griselimycins. Science, 348, 2015
6E8D	Crystal structure of the Bacillus subtilis sliding clamp-MutL complex. 分子名称: Beta sliding clamp,DNA mismatch repair protein MutL, GLYCEROL 著者 Guarne, A, Almawi, A.W. 登録日 2018-07-28 公開日 2019-05-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Binding of the regulatory domain of MutL to the sliding beta-clamp is species specific. Nucleic Acids Res., 47, 2019
8DT6	Crystal Structure of DNA Polymerase III beta subunit from Elizabethkingia anophelis 分子名称: Beta sliding clamp, CALCIUM ION, CHLORIDE ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-07-25 公開日 2022-08-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal Structure of DNA Polymerase III beta subunit from Elizabethkingia anophelis to be published
6MAN	Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C 分子名称: 1,2-ETHANEDIOL, Beta sliding clamp, THIOCYANATE ION 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-08-28 公開日 2018-09-05 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C To Be Published
6AMS	Crystal structure of the DNA polymerase III subunit beta from Pseudomonas aeruginosa 分子名称: Beta sliding clamp, PHOSPHATE ION 著者 McGrath, A.E, Oakley, A.J. 登録日 2017-08-11 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens. J. Struct. Biol., 204, 2018
7AZL	DNA polymerase sliding clamp from Escherichia coli with peptide 38 bound 分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y. 登録日 2020-11-16 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp. J.Med.Chem., 64, 2021
6D47	Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Mycobacterium marinum 分子名称: Beta sliding clamp 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-04-17 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Mycobacterium marinum To Be Published
6DEG	Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Bartonella birtlesii LL-WM9 分子名称: Beta sliding clamp 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-05-11 公開日 2018-05-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of a DNA polymerase III subunit beta DnaN sliding clamp from Bartonella birtlesii LL-WM9 To Be Published
8DJ6	Sliding-clamp-ImuB peptide 分子名称: ACETATE ION, Beta sliding clamp, FORMIC ACID, ... 著者 Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N. 登録日 2022-06-30 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Interaction of sliding clamp with mycobacterial polymerases To Be Published
4K74	The UmuC subunit of the E. coli DNA polymerase V shows a unique interaction with the beta-clamp processivity factor. 分子名称: DNA polymerase III subunit beta, UmuC peptide 著者 Patoli, A.A, Winter, J.A, Bunting, K.A. 登録日 2013-04-16 公開日 2013-07-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The UmuC subunit of the E. coli DNA polymerase V shows a unique interaction with the beta-clamp processivity factor. Bmc Struct.Biol., 13, 2013
1JQL	Mechanism of Processivity Clamp Opening by the Delta Subunit Wrench of the Clamp Loader Complex of E. coli DNA Polymerase III: Structure of beta-delta (1-140) 分子名称: DNA Polymerase III, BETA CHAIN, DELTA SUBUNIT 著者 Jeruzalmi, D, Yurieva, O, Zhao, Y, Young, M, Stewart, J, Hingorani, M, O'Donnell, M, Kuriyan, J. 登録日 2001-08-07 公開日 2001-09-26 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Cell(Cambridge,Mass.), 106, 2001
8DK9	Sliding-clamp-DinX peptide 分子名称: ACETYL GROUP, AMINO GROUP, Beta sliding clamp, ... 著者 Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N. 登録日 2022-07-05 公開日 2023-01-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Interaction of sliding clamp with mycobacterial polymerases To Be Published
2AWA	Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution 分子名称: DNA polymerase III, beta chain, GLYCEROL 著者 Joint Center for Structural Genomics (JCSG) 登録日 2005-08-31 公開日 2005-09-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of DNA polymerase III, beta chain (EC 2.7.7.7) (np_344555.1) from STREPTOCOCCUS PNEUMONIAE TIGR4 at 2.50 A resolution To be published
2POL	THREE-DIMENSIONAL STRUCTURE OF THE BETA SUBUNIT OF ESCHERICHIA COLI DNA POLYMERASE III HOLOENZYME: A SLIDING DNA CLAMP 分子名称: DNA POLYMERASE III (BETA SUBUNIT) 著者 Kong, X.-P, Kuriyan, J. 登録日 1992-11-13 公開日 1994-01-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp. Cell(Cambridge,Mass.), 69, 1992
3Q4K	Structure of a small peptide ligand bound to E.coli DNA sliding clamp 分子名称: DNA polymerase III subunit beta, peptide ligand 著者 Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D. 登録日 2010-12-23 公開日 2011-12-28 最終更新日 2013-03-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure-based design of short peptide ligands binding onto the E. coli processivity ring. J.Med.Chem., 54, 2011
8GJ2	E. coli clamp loader with closed clamp on primed template DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
6AMQ	Crystal structure of the DNA polymerase III subunit beta from Enterobacter cloacae 分子名称: DNA polymerase III subunit beta, SULFATE ION 著者 McGrath, A.E, Oakley, A.J. 登録日 2017-08-11 公開日 2017-11-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Crystal structures and biochemical characterization of DNA sliding clamps from three Gram-negative bacterial pathogens. J. Struct. Biol., 204, 2018
6FVO	Mutant DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide 分子名称: Beta sliding clamp, CALCIUM ION, P7 peptide 著者 Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D. 登録日 2018-03-04 公開日 2019-04-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.689 Å) 主引用文献 Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis., 2019
8GIZ	E. coli clamp loader with open clamp 分子名称: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... 著者 Oakley, A.J, Xu, Z.-Q, Dixon, N.E. 登録日 2023-03-14 公開日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural characterisation of the complete cycle of sliding clamp loading in E. coli To Be Published
8DJQ	Sliding-clamp-DnaE1 peptide 分子名称: ACETYL GROUP, AMINO GROUP, Beta sliding clamp, ... 著者 Kapur, M.K, Gray, O.J, Honzatko, R.H, Nelson, S.N. 登録日 2022-07-01 公開日 2023-01-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Interaction of the sliding clamp with mycobacterial polymerases To Be Published
3P16	Crystal structure of DNA polymerase III sliding clamp 分子名称: DNA polymerase III subunit beta 著者 Gui, W.J, Lin, S.Q, Chen, Y.Y, Zhang, X.E, Bi, L.J, Jiang, T. 登録日 2010-09-30 公開日 2011-08-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Crystal structure of DNA polymerase III beta sliding clamp from Mycobacterium tuberculosis. Biochem.Biophys.Res.Commun., 405, 2011

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