PDB: 133 件ウェブページステータス検索Chemie searchBIRD

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5MKI	Crystal structure of SmAP (LSm) protein from Methanococcus vannielii 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Like-Sm ribonucleoprotein core 著者 Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V. 登録日 2016-12-05 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.048 Å) 主引用文献 Crystal structures and RNA-binding properties of Lsm proteins from archaea Sulfolobus acidocaldarius and Methanococcus vannielii: Similarity and difference of the U-binding mode. Biochimie, 175, 2020
5MKN	Crystal structure of SmAP (LSm) protein from Methanococcus vannielii 分子名称: Like-Sm ribonucleoprotein core, TETRAETHYLENE GLYCOL, URIDINE-5'-MONOPHOSPHATE 著者 Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V, Kravchenko, O.V. 登録日 2016-12-05 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure of SmAP (LSm) protein from Methanococcus vannielii in complex with URIDINE-5'-MONOPHOSPHATE To Be Published
5MKL	Crystal structure of SmAP (LSm) protein from Sulfolobus acidocaldarius 分子名称: Sm ribonucleo 著者 Nikulin, A.D, Lekontseva, N.V, Tishchenko, S.V. 登録日 2016-12-05 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.086 Å) 主引用文献 Crystal structures and RNA-binding properties of Lsm proteins from archaea Sulfolobus acidocaldarius and Methanococcus vannielii: Similarity and difference of the U-binding mode. Biochimie, 175, 2020
1I5L	CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNA 分子名称: 5'-R(*UP*UP*U)-3', PUTATIVE SNRNP SM-LIKE PROTEIN AF-SM1, URIDINE 著者 Toro, I, Thore, S, Mayer, C, Basquin, J, Seraphin, B, Suck, D. 登録日 2001-02-28 公開日 2001-08-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex. EMBO J., 20, 2001
1I81	CRYSTAL STRUCTURE OF A HEPTAMERIC LSM PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM 分子名称: PUTATIVE SNRNP SM-LIKE PROTEIN 著者 Collins, B.M, Harrop, S.J, Kornfeld, G.D, Dawes, I.W, Curmi, P.M.G, Mabbutt, B.C. 登録日 2001-03-12 公開日 2001-03-28 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of a heptameric Sm-like protein complex from archaea: implications for the structure and evolution of snRNPs. J.Mol.Biol., 309, 2001
1I8F	THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE 分子名称: GLYCEROL, PUTATIVE SNRNP SM-LIKE PROTEIN 著者 Mura, C, Cascio, D, Sawaya, M.R, Eisenberg, D. 登録日 2001-03-14 公開日 2001-05-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core. Proc.Natl.Acad.Sci.USA, 98, 2001
1I4K	CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS AT 2.5A RESOLUTION 分子名称: CITRIC ACID, PUTATIVE SNRNP SM-LIKE PROTEIN 著者 Toro, I, Thore, S, Mayer, C, Basquin, J, Seraphin, B, Suck, D. 登録日 2001-02-22 公開日 2001-08-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex. EMBO J., 20, 2001
1JBM	Heptameric crystal structure of Mth649, an Sm-like archaeal protein from Methanobacterium thermautotrophicum 分子名称: 1,2-ETHANEDIOL, ACETIC ACID, PUTATIVE SNRNP SM-LIKE PROTEIN 著者 Mura, C, Eisenberg, D. 登録日 2001-06-06 公開日 2003-03-25 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs) Protein Sci., 12, 2003
1JRI	The Crystal Structure of an Sm-like Archaeal Protein with Two Heptamers in the Asymmetric Unit. 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Sm-like Archaeal Protein 1 (SmAP1) 著者 Mura, C, Eisenberg, D. 登録日 2001-08-13 公開日 2002-02-13 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs) Protein Sci., 12, 2003
1LNX	Crystal structure of the P.aerophilum SmAP1 heptamer in a new crystal form (C2221) 分子名称: ACETIC ACID, GLYCEROL, URIDINE, ... 著者 Mura, C, Kozhukhovsky, A, Eisenberg, D. 登録日 2002-05-04 公開日 2003-03-25 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs) Protein Sci., 12, 2003
1LJO	CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM2) FROM ARCHAEOGLOBUS FULGIDUS AT 1.95A RESOLUTION 分子名称: ACETIC ACID, Archaeal Sm-like protein AF-Sm2, CADMIUM ION 著者 Toro, I, Basquin, J, Teo-Dreher, H, Suck, D. 登録日 2002-04-22 公開日 2002-07-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Archaeal Sm proteins form heptameric and hexameric complexes: crystal structures of the Sm1 and Sm2 proteins from the hyperthermophile Archaeoglobus fulgidus. J.Mol.Biol., 320, 2002
1LOJ	Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, URIDINE, URIDINE-5'-MONOPHOSPHATE, ... 著者 Mura, C, Kozhukhovsky, A, Eisenberg, D. 登録日 2002-05-06 公開日 2003-03-25 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs) Protein Sci., 12, 2003
1M8V	Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer 分子名称: 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3', CALCIUM ION, PUTATIVE SNRNP SM-LIKE PROTEIN, ... 著者 Thore, S, Mayer, C, Sauter, C, Weeks, S, Suck, D. 登録日 2002-07-26 公開日 2003-02-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Pyrococcus abyssii Sm core and its Complex with RNA: Common Features of RNA-binding in Archaea and Eukarya J.Biol.Chem., 278, 2003
1MGQ	CRYSTAL STRUCTURE OF A HEPTAMERIC SM-LIKE PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM 分子名称: SM-LIKE PROTEIN 著者 Collins, B.M, Naidoo, N, Harrop, S.J, Curmi, P.M.G, Mabbutt, B.C. 登録日 2002-08-16 公開日 2002-12-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Refined Structure of Sm-Like Protein Heptamer from Methanobacterium thermoautotrophicum To be published
4V98	The 8S snRNP Assembly Intermediate 分子名称: CG10419, Icln, LD23602p, ... 著者 Grimm, C, Pelz, J.P, Schindelin, H, Diederichs, K, Kuper, J, Kisker, C. 登録日 2012-05-15 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural Basis of Assembly Chaperone- Mediated snRNP Formation. Mol.Cell, 49, 2013
6V4X	Cryo-EM structure of an active human histone pre-mRNA 3'-end processing machinery at 3.2 Angstrom resolution 分子名称: Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 3, Small nuclear ribonucleoprotein E, ... 著者 Sun, Y, Zhang, Y, Walz, T, Tong, L. 登録日 2019-12-02 公開日 2020-02-19 最終更新日 2022-03-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of an active human histone pre-mRNA 3'-end processing machinery. Science, 367, 2020
4F7U	The 6S snRNP assembly intermediate 分子名称: HEXAETHYLENE GLYCOL, Methylosome subunit pICln, Small nuclear ribonucleoprotein E, ... 著者 Grimm, C, Pelz, J.P. 登録日 2012-05-16 公開日 2013-01-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.898 Å) 主引用文献 Structural Basis of Assembly Chaperone- Mediated snRNP Formation. Mol.Cell, 49, 2013
4C8Q	Crystal structure of the yeast Lsm1-7-Pat1 complex 分子名称: COBALT (II) ION, DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1, SM-LIKE PROTEIN LSM1, ... 著者 Sharif, H, Conti, E. 登録日 2013-10-01 公開日 2013-10-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.698 Å) 主引用文献 Architecture of the Lsm1-7-Pat1 Complex: A Conserved Assembly in Eukaryotic Mrna Turnover Cell Rep., 5, 2013
5XJS	Crystal Structure of the Gemin2-binding domain of SMN, Gemin2dN39 in Complex with SmD1(1-82)/D2/F/E from Human 分子名称: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Yi, H, Zhang, R. 登録日 2017-05-04 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.38 Å) 主引用文献 Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly. Nucleic Acids Res., 2019
5XJT	Crystal Structure of the Gemin2-binding domain of SMN, Gemin2 in Complex with SmD1(1-82)/D2.R61A/F/E/G from Human 分子名称: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Yi, H, Zhang, R. 登録日 2017-05-04 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Structures of 7S mutant complexes To Be Published
4N0A	Crystal structure of Lsm2-3-Pat1C complex from Saccharomyces cerevisiae 分子名称: DNA topoisomerase 2-associated protein PAT1, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3 著者 Wu, D.H. 登録日 2013-10-01 公開日 2013-12-04 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation Cell Res., 24, 2014
4PJO	Minimal U1 snRNP 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ETHANOL, ... 著者 Kondo, Y, Oubridge, C, van Roon, A.M, Nagai, K. 登録日 2014-05-12 公開日 2014-12-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal structure of human U1 snRNP, a small nuclear ribonucleoprotein particle, reveals the mechanism of 5' splice site recognition. Elife, 4, 2015
5XJR	Crystal Structure of the Gemin2-binding domain of SMN, Gemin2dN39 in Complex with SmD1(1-82)/D2/F/E/G from Human 分子名称: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Yi, H, Zhang, R. 登録日 2017-05-04 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.12 Å) 主引用文献 Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly. Nucleic Acids Res., 2019
5XJQ	Crystal Structure of the Gemin2-binding domain of SMN, Gemin2 in Complex with SmD1(1-82)/D2/F/E/G from Human 分子名称: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Yi, H, Zhang, R. 登録日 2017-05-04 公開日 2018-07-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly. Nucleic Acids Res., 2019
5XJL	Crystal Structure of the Gemin2-binding domain of SMN, Gemin2 in Complex with SmD1/D2/F/E/G from Human 分子名称: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Zhang, R. 登録日 2017-05-02 公開日 2018-05-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of a key intermediate of the SMN complex reveals Gemin2's crucial function in snRNP assembly Cell, 146, 2011

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