PDB: 44643 resultsInfo pagesStatus searchChemie searchBIRD

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5HXS	Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 10mM Sr2+ Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, PENTADECANE, ... Authors: Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D. Deposit date: 2016-01-31 Release date: 2016-05-11 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.789 Å) Cite: Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger Nat.Struct.Mol.Biol., 23, 2016
5HXR	Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 10mM Ca2+ Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, PENTADECANE, ... Authors: Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D. Deposit date: 2016-01-31 Release date: 2016-05-11 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.463 Å) Cite: Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger Nat.Struct.Mol.Biol., 23, 2016
5JDF	Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 1mM Ca2+ Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, PENTADECANE, ... Authors: Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D. Deposit date: 2016-04-16 Release date: 2016-05-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger. Nat.Struct.Mol.Biol., 23, 2016
7DIX	Crystal structure of LeuT in lipidic cubic phase at pH 5 Descriptor: Na(+):neurotransmitter symporter (Snf family), SELENOMETHIONINE, SODIUM ION Authors: Fan, J, Xiao, Y, Sun, Z, Zhou, X. Deposit date: 2020-11-19 Release date: 2021-04-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.49 Å) Cite: Crystal structures of LeuT reveal conformational dynamics in the outward-facing states. J.Biol.Chem., 296, 2021
5A6F	Cryo-EM structure of the Slo2.2 Na-activated K channel Descriptor: GATING RING OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, RCK2 ELABORATION OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1 Authors: Hite, R.K, Yuan, P, Li, Z, Hsuing, Y, Walz, T, MacKinnon, R. Deposit date: 2015-06-25 Release date: 2015-10-14 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Cryo-Electron Microscopy Structure of the Slo2.2 Na1-Activated K1 Channel Nature, 527, 2015
4BWZ	Crystal structure of the sodium proton antiporter, NapA Descriptor: NA(+)/H(+) ANTIPORTER, ZINC ION Authors: Lee, C, Drew, D, Cameron, A.D. Deposit date: 2013-07-05 Release date: 2013-08-28 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.984 Å) Cite: A two-domain elevator mechanism for sodium/proton antiport. Nature, 501, 2013
2M7X	Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2 Descriptor: Na(+)/H(+) antiporter Authors: Ullah, A, Kemp, G, Lee, B, Alves, C, Young, H, Sykes, B.D, Fliegel, L. Deposit date: 2013-05-02 Release date: 2013-06-05 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2. J.Biol.Chem., 288, 2013
7DJ1	Crystal structure of the G26C mutant of LeuT Descriptor: LEUCINE, Na(+):neurotransmitter symporter (Snf family), SODIUM ION Authors: Fan, J, Xiao, Y, Sun, Z, Zhou, X. Deposit date: 2020-11-19 Release date: 2021-04-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.528 Å) Cite: Crystal structures of LeuT reveal conformational dynamics in the outward-facing states. J.Biol.Chem., 296, 2021
1JTW	Structure of SL4 RNA from the HIV-1 Packaging Signal Descriptor: 5'-R(*GP*GP*GP*UP*GP*CP*GP*AP*GP*AP*GP*CP*GP*UP*CP*A)-3', SODIUM ION Authors: Kerwood, D.J, Cavaluzzi, M.J, Borer, P.N. Deposit date: 2001-08-22 Release date: 2001-12-12 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Structure of SL4 RNA from the HIV-1 packaging signal. Biochemistry, 40, 2001
5BZ2	CRYSTAL STRUCTURE OF THE SODIUM PROTON ANTIPORTER NAPA IN INWARD-FACING CONFORMATION Descriptor: Na(+)/H(+) antiporter Authors: Coincon, M, Uzdavinys, P, Cameron, A, Drew, D. Deposit date: 2015-06-11 Release date: 2016-01-20 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters. Nat.Struct.Mol.Biol., 23, 2016
2KRG	Solution Structure of human sodium/ hydrogen exchange regulatory factor 1(150-358) Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF1 Authors: Bhattacharya, S, Dai, Z, Li, J, Baxter, S, Callaway, D.J.E, Cowburn, D, Bu, Z. Deposit date: 2009-12-17 Release date: 2009-12-29 Last modified: 2023-07-26 Method: SOLUTION NMR Cite: A conformational switch in the scaffolding protein NHERF1 controls autoinhibition and complex formation. J.Biol.Chem., 285, 2010
4D0A	3D EM map of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii Descriptor: NA(+)/H(+) ANTIPORTER 1 Authors: Paulino, C, Woehlert, D, Yildiz, O, Kuhlbrandt, W. Deposit date: 2014-04-25 Release date: 2014-12-10 Last modified: 2023-12-20 Method: ELECTRON CRYSTALLOGRAPHY (6 Å) Cite: 3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii Elife, 3, 2014
4CZB	Structure of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii at pH 8. Descriptor: NA(+)/H(+) ANTIPORTER 1, POTASSIUM ION, TRIS(HYDROXYETHYL)AMINOMETHANE Authors: Woehlert, D, Paulino, C, Kapotova, E, Kuhlbrandt, W, Yildiz, O. Deposit date: 2014-04-16 Release date: 2014-12-10 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.5 Å) Cite: 3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii Elife, 3, 2014
7QHA	Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in amphipol Descriptor: Megabody c7HopQ, Putative TRAP-type C4-dicarboxylate transport system, large permease component, ... Authors: North, R.A, Davies, J.S, Morado, D, Dobson, R.C.J. Deposit date: 2021-12-11 Release date: 2022-12-21 Last modified: 2023-03-22 Method: ELECTRON MICROSCOPY (2.97 Å) Cite: Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nat Commun, 14, 2023
6V1Q	Two-pore channel 3 Descriptor: SODIUM ION, Two pore channel 3 Authors: Dickinson, M.S, Stroud, R.M. Deposit date: 2019-11-20 Release date: 2019-12-04 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.11 Å) Cite: Resting state structure of the hyperdepolarization activated two-pore channel 3. Proc.Natl.Acad.Sci.USA, 117, 2020
3QS5	Crystal structure of LeuT mutant I359Q bound to sodium and L-tryptophan Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ... Authors: Piscitelli, C.L, Gouaux, E. Deposit date: 2011-02-19 Release date: 2011-10-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Insights into transport mechanism from LeuT engineered to transport tryptophan. Embo J., 31, 2012
3QS6	Crystal structure of LeuT mutant F259V,I359Q bound to sodium and L-tryptophan Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ... Authors: Piscitelli, C.L, Gouaux, E. Deposit date: 2011-02-19 Release date: 2011-10-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.801 Å) Cite: Insights into transport mechanism from LeuT engineered to transport tryptophan. Embo J., 31, 2012
3QS4	Crystal structure of LeuT mutant F259V bound to sodium and L-tryptophan Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ... Authors: Piscitelli, C.L, Gouaux, E. Deposit date: 2011-02-19 Release date: 2011-10-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.631 Å) Cite: Insights into transport mechanism from LeuT engineered to transport tryptophan. Embo J., 31, 2012
1VTP	VACUOLAR TARGETING PEPTIDE FROM NA-PROPI Descriptor: VACUOLAR TARGETING PEPTIDE Authors: Nielsen, K.J, Hill, J.M, Anderson, M.A, Craik, D.J. Deposit date: 1995-11-14 Release date: 1996-03-08 Last modified: 2022-03-02 Method: SOLUTION NMR Cite: Synthesis and structure determination by NMR of a putative vacuolar targeting peptide and model of a proteinase inhibitor from Nicotiana alata. Biochemistry, 35, 1996
9ICC	DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND CRCL3 Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CHROMIUM ION, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1995-12-15 Release date: 1995-12-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis. Biochemistry, 35, 1996
9ICG	DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1995-12-15 Release date: 1996-11-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (3 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis. Biochemistry, 35, 1996
9ICL	DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF PYROPHOSPHATE AND MNCL2 Descriptor: DNA (5'-D(*CP*AP*GP*AP*TP*G)-3'), DNA (5'-D(*CP*AP*TP*CP*TP*GP*T)-3'), MANGANESE (II) ION, ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1996-01-04 Release date: 1996-11-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis Biochemistry, 35, 1996
9ICH	DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1995-12-15 Release date: 1996-11-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis. Biochemistry, 35, 1996
9ICJ	DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1995-12-15 Release date: 1996-11-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis Biochemistry, 35, 1996
9ICE	DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CUCL2 (0.1 MILLIMOLAR) Descriptor: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'), PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)), ... Authors: Pelletier, H, Sawaya, M.R. Deposit date: 1995-12-15 Release date: 1996-11-15 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis. Biochemistry, 35, 1996

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