Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HXH
DownloadVisualize
BU of 5hxh by Molmil
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with zero Na+ and Ca2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, PENTADECANE, ...
Authors:Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D.
Deposit date:2016-01-30
Release date:2016-05-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger
Nat.Struct.Mol.Biol., 23, 2016
5JDF
DownloadVisualize
BU of 5jdf by Molmil
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 2.5 mM Na+ and 1mM Ca2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, PENTADECANE, ...
Authors:Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D.
Deposit date:2016-04-16
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger.
Nat.Struct.Mol.Biol., 23, 2016
5A6E
DownloadVisualize
BU of 5a6e by Molmil
Cryo-EM structure of the Slo2.2 Na-activated K channel
Descriptor: GATING RING OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, PORE DOMAIN OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, RCK2 ELABORATION OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, ...
Authors:Hite, R.K, Yuan, P, Li, Z, Hsuing, Y, Walz, T, MacKinnon, R.
Deposit date:2015-06-25
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-Electron Microscopy Structure of the Slo2.2 Na1-Activated K1 Channel
Nature, 527, 2015
5A6G
DownloadVisualize
BU of 5a6g by Molmil
Cryo-EM structure of the Slo2.2 Na-activated K channel
Descriptor: PORE DOMAIN OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, S1-S4 DOMAIN OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1
Authors:Hite, R.K, Yuan, P, Li, Z, Hsuing, Y, Walz, T, MacKinnon, R.
Deposit date:2015-06-25
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cryo-Electron Microscopy Structure of the Slo2.2 Na1-Activated K1 Channel
Nature, 527, 2015
5A6F
DownloadVisualize
BU of 5a6f by Molmil
Cryo-EM structure of the Slo2.2 Na-activated K channel
Descriptor: GATING RING OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1, RCK2 ELABORATION OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1
Authors:Hite, R.K, Yuan, P, Li, Z, Hsuing, Y, Walz, T, MacKinnon, R.
Deposit date:2015-06-25
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-Electron Microscopy Structure of the Slo2.2 Na1-Activated K1 Channel
Nature, 527, 2015
3QDZ
DownloadVisualize
BU of 3qdz by Molmil
Crystal structure of the human thrombin mutant D102N in complex with the extracellular fragment of human PAR4.
Descriptor: Proteinase-activated receptor 4, Thrombin heavy chain, Thrombin light chain
Authors:Gandhi, P, Chen, Z, Appelbaum, E, Zapata, F, Di Cera, E.
Deposit date:2011-01-19
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of thrombin-protease-receptor interactions
IUBMB LIFE, 63, 2011
4XPA
DownloadVisualize
BU of 4xpa by Molmil
X-ray structure of Drosophila dopamine transporter bound to 3,4dichlorophenethylamine
Descriptor: 2-(3,4-dichlorophenyl)ethanamine, Antibody fragment heavy chain-protein, 9D5-heavy chain, ...
Authors:Aravind, P, Wang, K, Gouaux, E.
Deposit date:2015-01-16
Release date:2015-05-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Neurotransmitter and psychostimulant recognition by the dopamine transporter.
Nature, 521, 2015
4BWZ
DownloadVisualize
BU of 4bwz by Molmil
Crystal structure of the sodium proton antiporter, NapA
Descriptor: NA(+)/H(+) ANTIPORTER, ZINC ION
Authors:Lee, C, Drew, D, Cameron, A.D.
Deposit date:2013-07-05
Release date:2013-08-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.984 Å)
Cite:A two-domain elevator mechanism for sodium/proton antiport.
Nature, 501, 2013
7DIX
DownloadVisualize
BU of 7dix by Molmil
Crystal structure of LeuT in lipidic cubic phase at pH 5
Descriptor: Na(+):neurotransmitter symporter (Snf family), SELENOMETHIONINE, SODIUM ION
Authors:Fan, J, Xiao, Y, Sun, Z, Zhou, X.
Deposit date:2020-11-19
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Crystal structures of LeuT reveal conformational dynamics in the outward-facing states.
J.Biol.Chem., 296, 2021
5BZ2
DownloadVisualize
BU of 5bz2 by Molmil
CRYSTAL STRUCTURE OF THE SODIUM PROTON ANTIPORTER NAPA IN INWARD-FACING CONFORMATION
Descriptor: Na(+)/H(+) antiporter
Authors:Coincon, M, Uzdavinys, P, Cameron, A, Drew, D.
Deposit date:2015-06-11
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.
Nat.Struct.Mol.Biol., 23, 2016
1JTW
DownloadVisualize
BU of 1jtw by Molmil
Structure of SL4 RNA from the HIV-1 Packaging Signal
Descriptor: 5'-R(*GP*GP*GP*UP*GP*CP*GP*AP*GP*AP*GP*CP*GP*UP*CP*A)-3', SODIUM ION
Authors:Kerwood, D.J, Cavaluzzi, M.J, Borer, P.N.
Deposit date:2001-08-22
Release date:2001-12-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of SL4 RNA from the HIV-1 packaging signal.
Biochemistry, 40, 2001
7DJ1
DownloadVisualize
BU of 7dj1 by Molmil
Crystal structure of the G26C mutant of LeuT
Descriptor: LEUCINE, Na(+):neurotransmitter symporter (Snf family), SODIUM ION
Authors:Fan, J, Xiao, Y, Sun, Z, Zhou, X.
Deposit date:2020-11-19
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.528 Å)
Cite:Crystal structures of LeuT reveal conformational dynamics in the outward-facing states.
J.Biol.Chem., 296, 2021
2M7X
DownloadVisualize
BU of 2m7x by Molmil
Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2
Descriptor: Na(+)/H(+) antiporter
Authors:Ullah, A, Kemp, G, Lee, B, Alves, C, Young, H, Sykes, B.D, Fliegel, L.
Deposit date:2013-05-02
Release date:2013-06-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2.
J.Biol.Chem., 288, 2013
7QHA
DownloadVisualize
BU of 7qha by Molmil
Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in amphipol
Descriptor: Megabody c7HopQ, Putative TRAP-type C4-dicarboxylate transport system, large permease component, ...
Authors:North, R.A, Davies, J.S, Morado, D, Dobson, R.C.J.
Deposit date:2021-12-11
Release date:2022-12-21
Last modified:2023-03-22
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter.
Nat Commun, 14, 2023
4D0A
DownloadVisualize
BU of 4d0a by Molmil
3D EM map of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii
Descriptor: NA(+)/H(+) ANTIPORTER 1
Authors:Paulino, C, Woehlert, D, Yildiz, O, Kuhlbrandt, W.
Deposit date:2014-04-25
Release date:2014-12-10
Last modified:2023-12-20
Method:ELECTRON CRYSTALLOGRAPHY (6 Å)
Cite:3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii
Elife, 3, 2014
4CZB
DownloadVisualize
BU of 4czb by Molmil
Structure of the sodium proton antiporter MjNhaP1 from Methanocaldococcus jannaschii at pH 8.
Descriptor: NA(+)/H(+) ANTIPORTER 1, POTASSIUM ION, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Woehlert, D, Paulino, C, Kapotova, E, Kuhlbrandt, W, Yildiz, O.
Deposit date:2014-04-16
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:3D Em Map of the Sodium Proton Antiporter Mjnhap1 from Methanocaldococcus Jannaschii
Elife, 3, 2014
6V1Q
DownloadVisualize
BU of 6v1q by Molmil
Two-pore channel 3
Descriptor: SODIUM ION, Two pore channel 3
Authors:Dickinson, M.S, Stroud, R.M.
Deposit date:2019-11-20
Release date:2019-12-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Resting state structure of the hyperdepolarization activated two-pore channel 3.
Proc.Natl.Acad.Sci.USA, 117, 2020
2KRG
DownloadVisualize
BU of 2krg by Molmil
Solution Structure of human sodium/ hydrogen exchange regulatory factor 1(150-358)
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Dai, Z, Li, J, Baxter, S, Callaway, D.J.E, Cowburn, D, Bu, Z.
Deposit date:2009-12-17
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A conformational switch in the scaffolding protein NHERF1 controls autoinhibition and complex formation.
J.Biol.Chem., 285, 2010
3QS5
DownloadVisualize
BU of 3qs5 by Molmil
Crystal structure of LeuT mutant I359Q bound to sodium and L-tryptophan
Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ...
Authors:Piscitelli, C.L, Gouaux, E.
Deposit date:2011-02-19
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into transport mechanism from LeuT engineered to transport tryptophan.
Embo J., 31, 2012
3QS6
DownloadVisualize
BU of 3qs6 by Molmil
Crystal structure of LeuT mutant F259V,I359Q bound to sodium and L-tryptophan
Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ...
Authors:Piscitelli, C.L, Gouaux, E.
Deposit date:2011-02-19
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Insights into transport mechanism from LeuT engineered to transport tryptophan.
Embo J., 31, 2012
3QS4
DownloadVisualize
BU of 3qs4 by Molmil
Crystal structure of LeuT mutant F259V bound to sodium and L-tryptophan
Descriptor: Na(+):neurotransmitter symporter (Snf family), SODIUM ION, TRYPTOPHAN, ...
Authors:Piscitelli, C.L, Gouaux, E.
Deposit date:2011-02-19
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.631 Å)
Cite:Insights into transport mechanism from LeuT engineered to transport tryptophan.
Embo J., 31, 2012
8HB0
DownloadVisualize
BU of 8hb0 by Molmil
Structure of human SGLT2-MAP17 complex with TA1887
Descriptor: (2R,3R,4S,5S,6R)-2-[3-[(4-cyclopropylphenyl)methyl]-4-fluoranyl-indol-1-yl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-10-27
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024
8HDH
DownloadVisualize
BU of 8hdh by Molmil
Structure of human SGLT2-MAP17 complex with Canagliflozin
Descriptor: (2~{S},3~{R},4~{R},5~{S},6~{R})-2-[3-[[5-(4-fluorophenyl)thiophen-2-yl]methyl]-4-methyl-phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-11-04
Release date:2023-11-08
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024
8HG7
DownloadVisualize
BU of 8hg7 by Molmil
Structure of human SGLT2-MAP17 complex with Sotagliflozin
Descriptor: (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[(4-ethoxyphenyl)methyl]phenyl]-6-methylsulfanyl-oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-11-14
Release date:2023-11-15
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024
8HEZ
DownloadVisualize
BU of 8hez by Molmil
Structure of human SGLT2-MAP17 complex with Dapagliflozin
Descriptor: (2S,3R,4R,5S,6R)-2-[4-chloranyl-3-[(4-ethoxyphenyl)methyl]phenyl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-11-09
Release date:2023-11-15
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon