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PDB: 84 results

7LAF
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BU of 7laf by Molmil
15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor
Descriptor: 3-{[(4-methylphenyl)methyl]sulfanyl}-1-phenyl-1H-1,2,4-triazole, MANGANESE (II) ION, Polyunsaturated fatty acid lipoxygenase ALOX15B
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2021-01-06
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Kinetic and structural investigations of novel inhibitors of human epithelial 15-lipoxygenase-2.
Bioorg.Med.Chem., 46, 2021
3O8Y
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BU of 3o8y by Molmil
Stable-5-Lipoxygenase
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Bartlett, S.G, Waight, M.T, Neau, D.B, Boeglin, W.E, Brash, A.R.
Deposit date:2010-08-03
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.389 Å)
Cite:The structure of human 5-lipoxygenase.
Science, 331, 2011
6N2W
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BU of 6n2w by Molmil
The structure of Stable-5-Lipoxygenase bound to NDGA
Descriptor: 4-[(2R,3S)-3-[(3,4-DIHYDROXYPHENYL)METHYL]-2-METHYLBUTYL]BENZENE-1,2-DIOL, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2018-11-14
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products.
Nat.Chem.Biol., 16, 2020
6NCF
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BU of 6ncf by Molmil
The structure of Stable-5-Lipoxygenase bound to AKBA
Descriptor: (3alpha,8alpha,17alpha,18alpha)-3-(acetyloxy)-11-oxours-12-en-23-oic acid, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Newcomer, M.E, Gilbert, N.C, Neau, D.B.
Deposit date:2018-12-11
Release date:2020-05-13
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (2.871 Å)
Cite:Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products.
Nat.Chem.Biol., 16, 2020
1BI9
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BU of 1bi9 by Molmil
RETINAL DEHYDROGENASE TYPE TWO WITH NAD BOUND
Descriptor: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, RETINAL DEHYDROGENASE TYPE II
Authors:Newcomer, M.E, Lamb, A.L.
Deposit date:1998-06-23
Release date:1999-07-22
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of retinal dehydrogenase type II at 2.7 A resolution: implications for retinal specificity.
Biochemistry, 38, 1999
1EPA
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BU of 1epa by Molmil
STRUCTURE OF THE EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN
Authors:Newcomer, M.E.
Deposit date:1993-06-15
Release date:1994-07-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Structure, 1, 1993
1EPB
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BU of 1epb by Molmil
STRUCTURE OF THE EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: (9cis)-retinoic acid, EPIDIDYMAL RETINOIC ACID-BINDING PROTEIN
Authors:Newcomer, M.E.
Deposit date:1993-06-15
Release date:1994-07-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the epididymal retinoic acid binding protein at 2.1 A resolution.
Structure, 1, 1993
1FMJ
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BU of 1fmj by Molmil
CRYSTAL STRUCTURE OF MERCURY DERIVATIVE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, MERCURY (II) ION, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
4NRE
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BU of 4nre by Molmil
The structure of human 15-lipoxygenase-2 with a substrate mimic
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Arachidonate 15-lipoxygenase B, CALCIUM ION, ...
Authors:Kobe, M.J, Neau, D.B, Mitchell, C.E, Bartlett, S.G, Newcomer, M.E.
Deposit date:2013-11-26
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:The structure of human 15-lipoxygenase-2 with a substrate mimic.
J.Biol.Chem., 289, 2014
2FNQ
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BU of 2fnq by Molmil
Insights from the X-ray crystal structure of coral 8R-lipoxygenase: calcium activation via A C2-like domain and a structural basis of product chirality
Descriptor: Allene oxide synthase-lipoxygenase protein, CALCIUM ION, FE (II) ION
Authors:Oldham, M.L, Brash, A.R, Newcomer, M.E.
Deposit date:2006-01-11
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Insights from the X-ray crystal structure of coral 8R-lipoxygenase: calcium activation via a C2-like domain and a structural basis of product chirality.
J.Biol.Chem., 280, 2005
1I07
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BU of 1i07 by Molmil
EPS8 SH3 DOMAIN INTERTWINED DIMER
Descriptor: EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8
Authors:Kishan, K.V.R, Newcomer, M.E.
Deposit date:2001-01-29
Release date:2001-05-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of pH and salt bridges on structural assembly: molecular structures of the monomer and intertwined dimer of the Eps8 SH3 domain.
Protein Sci., 10, 2001
5DD8
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BU of 5dd8 by Molmil
The Crystal structure of HucR mutant (HucR-E48Q) from Deinococcus radiodurans
Descriptor: CHLORIDE ION, Transcriptional regulator, MarR family
Authors:Deochand, D.K, Perera, I.C, Crochet, R.B, Gilbert, N.C, Newcomer, M.E, Grove, A.
Deposit date:2015-08-24
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Histidine switch controlling pH-dependent protein folding and DNA binding in a transcription factor at the core of synthetic network devices.
Mol Biosyst, 12, 2016
4HAI
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BU of 4hai by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with N-cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide.
Descriptor: Bifunctional epoxide hydrolase 2, MAGNESIUM ION, N-cycloheptyl-1-[(2,4,6-trimethylphenyl)sulfonyl]piperidine-4-carboxamide, ...
Authors:Pecic, S, Pakhomova, S, Newcomer, M.E, Morisseau, C, Hammock, B.D, Zhu, Z, Deng, S.
Deposit date:2012-09-26
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Synthesis and structure-activity relationship of piperidine-derived non-urea soluble epoxide hydrolase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
1FML
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BU of 1fml by Molmil
CRYSTAL STRUCTURE OF RETINOL DEHYDRATASE IN A COMPLEX WITH RETINOL AND PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, RETINOL, ...
Authors:Pakhomova, S, Kobayashi, M, Buck, J, Newcomer, M.E.
Deposit date:2000-08-17
Release date:2001-05-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A helical lid converts a sulfotransferase to a dehydratase.
Nat.Struct.Biol., 8, 2001
5UYT
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BU of 5uyt by Molmil
Crystal structure of ice binding protein from an Antarctic bacterium Flavobacteriaceae
Descriptor: Ice-binding protein, NITRATE ION
Authors:Wang, C, Pakhomova, S, Newcomer, M.E, Christner, B.C, Luo, B.-H.
Deposit date:2017-02-24
Release date:2017-10-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of antifreeze activity of a bacterial multi-domain antifreeze protein.
PLoS ONE, 12, 2017
4J03
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BU of 4j03 by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with fulvestrant
Descriptor: (7beta,9beta,13alpha,17beta)-7-{9-[(R)-(4,4,5,5,5-pentafluoropentyl)sulfinyl]nonyl}estra-1(10),2,4-triene-3,17-diol, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
Authors:Morisseau, C, Pakhomova, S, Hwang, S.H, Newcomer, M.E, Hammock, B.D.
Deposit date:2013-01-30
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Inhibition of soluble epoxide hydrolase by fulvestrant and sulfoxides.
Bioorg.Med.Chem.Lett., 23, 2013
4KUM
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BU of 4kum by Molmil
Structure of LSD1-CoREST-Tetrahydrofolate complex
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Luka, Z, Pakhomova, S, Loukachevitch, L.V, Calcutt, M.W, Newcomer, M.E, Wagner, C.
Deposit date:2013-05-22
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structure of the histone lysine specific demethylase LSD1 complexed with tetrahydrofolate.
Protein Sci., 23, 2014
1X8J
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BU of 1x8j by Molmil
Crystal structure of retinol dehydratase in complex with androsterone and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Androsterone, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
1X8L
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BU of 1x8l by Molmil
Crystal structure of retinol dehydratase in complex with all-trans-4-oxoretinol and inactive cofactor PAP
Descriptor: 4-OXORETINOL, ADENOSINE-3'-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
7TTL
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BU of 7ttl by Molmil
Stable-5-LOX elongated Ha2 (4 copies ASU)
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Newcomer, M.E.
Deposit date:2022-02-01
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Helical remodeling augments 5-lipoxygenase activity in the synthesis of proinflammatory mediators.
J.Biol.Chem., 298, 2022
7TTJ
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BU of 7ttj by Molmil
Stable-5-LOX elongated Ha2
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Newcomer, M.E.
Deposit date:2022-02-01
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Helical remodeling augments 5-lipoxygenase activity in the synthesis of proinflammatory mediators.
J.Biol.Chem., 298, 2022
1X8K
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BU of 1x8k by Molmil
Crystal structure of retinol dehydratase in complex with anhydroretinol and inactive cofactor PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, ANHYDRORETINOL, CALCIUM ION, ...
Authors:Pakhomova, S, Buck, J, Newcomer, M.E.
Deposit date:2004-08-18
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of the unique sulfotransferase retinol dehydratase with product and inhibitors provide insight into enzyme mechanism and inhibition.
Protein Sci., 14, 2005
6AUM
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BU of 6aum by Molmil
Crystal structure of human soluble epoxide hydrolase complexed with trans-4-[4-(3-trifluoromethoxyphenyl-l-ureido)-cyclohexyloxy]-benzoic acid.
Descriptor: 4-{[trans-4-({[4-(trifluoromethoxy)phenyl]carbamoyl}amino)cyclohexyl]oxy}benzoic acid, Bifunctional epoxide hydrolase 2, CHLORIDE ION, ...
Authors:Kodani, S.D, Bahkta, S, Hwang, S.H, Pakhomova, S, Newcomer, M.E, Morisseau, C, Hammock, B.
Deposit date:2017-09-01
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification and optimization of soluble epoxide hydrolase inhibitors with dual potency towards fatty acid amide hydrolase.
Bioorg. Med. Chem. Lett., 28, 2018
3V99
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BU of 3v99 by Molmil
S663D Stable-5-LOX in complex with Arachidonic Acid
Descriptor: ARACHIDONIC ACID, Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
Deposit date:2011-12-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012
3V92
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BU of 3v92 by Molmil
S663A Stable-5-LOX
Descriptor: Arachidonate 5-lipoxygenase, FE (II) ION
Authors:Gilbert, N.C, Rui, Z, Neau, D.B, Waight, M, Bartlett, S.G, Boeglin, W.E, Brash, A.R, Newcomer, M.E.
Deposit date:2011-12-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663.
Faseb J., 26, 2012

 

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