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PDB: 18 results

4J2Q
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Crystal structure of C-terminally truncated arrestin reveals mechanism of arrestin activation
Descriptor: S-arrestin
Authors:Kim, Y.J, Scheerer, P, Choe, H.-W.
Deposit date:2013-02-05
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of pre-activated arrestin p44.
Nature, 497, 2013
5ZA0
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A cryo-protectant induces the conformational change of glyceraldehyde-3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase A, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Kim, Y.J.
Deposit date:2018-02-06
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A cryoprotectant induces conformational change in glyceraldehyde-3-phosphate dehydrogenase.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6C0V
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BU of 6c0v by Molmil
Molecular structure of human P-glycoprotein in the ATP-bound, outward-facing conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance protein 1
Authors:Kim, Y.J, Chen, J.
Deposit date:2018-01-02
Release date:2018-01-31
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular structure of human P-glycoprotein in the ATP-bound, outward-facing conformation.
Science, 359, 2018
8JZJ
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BU of 8jzj by Molmil
E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
Authors:Jang, K, Hlaing, S.H.S, Kim, H.G, Kim, N, Choe, H.W, Kim, Y.J.
Deposit date:2023-07-05
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
To Be Published
4X98
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Immunoglobulin Fc heterodimer variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Seok, S.H, Choi, H.J, Kim, Y.J, Seo, M.D, Kim, Y.S.
Deposit date:2014-12-11
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structures of immunoglobulin Fc heterodimers reveal the molecular basis for heterodimer formation.
Mol.Immunol., 65, 2015
4X99
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Immunoglobulin Fc heterodimers variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Seok, S.H, Choi, H.J, Kim, Y.J, Seo, M.D, Kim, Y.S.
Deposit date:2014-12-11
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal structures of immunoglobulin Fc heterodimers reveal the molecular basis for heterodimer formation.
Mol.Immunol., 65, 2015
7VCJ
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BU of 7vcj by Molmil
Arginine kinase H227A from Daphnia magna
Descriptor: Arginine kinase, NITRATE ION, PHOSPHATE ION
Authors:Kim, D.S, Jang, K, Kim, W.S, Kim, Y.J, Park, J.H.
Deposit date:2021-09-03
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of H227A Mutant of Arginine Kinase in Daphnia magna Suggests the Importance of Its Stability.
Molecules, 27, 2022
3QD6
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BU of 3qd6 by Molmil
Crystal structure of the CD40 and CD154 (CD40L) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD40 ligand, Tumor necrosis factor receptor superfamily member 5
Authors:Lee, J.-O, Kim, Y.J, Song, D.H, Kim, H.M, Park, B.S.
Deposit date:2011-01-18
Release date:2011-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallographic and mutational analysis of the CD40-CD154 complex and its implications for receptor activation
J.Biol.Chem., 286, 2011
4M4D
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BU of 4m4d by Molmil
Crystal structure of lipopolysaccharide binding protein
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Lipopolysaccharide-binding protein
Authors:Eckert, J.K, Kim, Y.J, Kim, J.I, Gurtler, K, Oh, D.Y, Ploeg, A.H, Pickkers, P, Lundvall, L, Hamann, L, Giamarellos-Bourboulis, E, Kubarenko, A.V, Weber, A.N, Kabesch, M, Kumpf, O, An, H.J, Lee, J.O, Schumann, R.R.
Deposit date:2013-08-07
Release date:2013-10-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.909 Å)
Cite:The crystal structure of lipopolysaccharide binding protein reveals the location of a frequent mutation that impairs innate immunity.
Immunity, 39, 2013
7F1W
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X-ray crystal structure of visual arrestin complexed with inositol hexaphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, S-arrestin
Authors:Kang, M, Jang, K, Eger, B.T, Ernst, O.P, Choe, H.W, Kim, Y.J.
Deposit date:2021-06-10
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
7F1X
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X-ray crystal structure of visual arrestin complexed with inositol 1,4,5-triphosphate
Descriptor: 1,2-ETHANEDIOL, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, PENTANEDIAL, ...
Authors:Jang, K, Kang, M, Eger, B.T, Choe, H.W, Ernst, O.P, Kim, Y.J.
Deposit date:2021-06-10
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural evidence for visual arrestin priming via complexation of phosphoinositols.
Structure, 30, 2022
3WMK
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BU of 3wmk by Molmil
Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
Descriptor: Lysozyme C
Authors:Lim, H, Rho, J, Hyun, J.K, Kim, Y.J.
Deposit date:2013-11-19
Release date:2014-10-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
TO BE PUBLISHED
3DQB
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Crystal structure of the active G-protein-coupled receptor opsin in complex with a C-terminal peptide derived from the Galpha subunit of transducin
Descriptor: 11meric peptide form Guanine nucleotide-binding protein G(t) subunit alpha-1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ...
Authors:Scheerer, P, Park, J.H, Hildebrand, P.W, Kim, Y.J, Krauss, N, Choe, H.-W, Hofmann, K.P, Ernst, O.P.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of opsin in its G-protein-interacting conformation
Nature, 455, 2008
3PQR
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BU of 3pqr by Molmil
Crystal structure of Metarhodopsin II in complex with a C-terminal peptide derived from the Galpha subunit of transducin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Guanine nucleotide-binding protein G(t) subunit alpha-1, ...
Authors:Choe, H.-W, Kim, Y.J, Park, J.H, Morizumi, T, Pai, E.F, Krauss, N, Hofmann, K.P, Scheerer, P, Ernst, O.P.
Deposit date:2010-11-26
Release date:2011-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of metarhodopsin II.
Nature, 471, 2011
3PXO
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BU of 3pxo by Molmil
Crystal structure of Metarhodopsin II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, RETINAL, ...
Authors:Choe, H.-W, Kim, Y.J, Park, J.H, Morizumi, T, Pai, E.F, Krauss, N, Hofmann, K.P, Scheerer, P, Ernst, O.P.
Deposit date:2010-12-10
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of metarhodopsin II.
Nature, 471, 2011
4NHI
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BU of 4nhi by Molmil
Crystal structure of Hen egg-white lysozyme in Tris buffer at pH 7.5 with Magnesium formate
Descriptor: Lysozyme C
Authors:Lim, H, Rho, J, Hyun, J.K, Kim, Y.J.
Deposit date:2013-11-05
Release date:2014-11-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of Hen egg-white lysozyme in Tris buffer at pH 7.5 with Magnesium formate
To be Published
6J10
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BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
Descriptor: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
Authors:Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
Deposit date:2018-12-27
Release date:2019-04-17
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
7BXA
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Crystal structure of PD-1 in complex with tislelizumab Fab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S, Lee, S.H, Lim, H, Lee, H.T, Kim, Y.J, Park, E.B.
Deposit date:2020-04-18
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Crystal structure of PD-1 in complex with an antibody-drug tislelizumab used in tumor immune checkpoint therapy.
Biochem.Biophys.Res.Commun., 527, 2020

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