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PDB: 38 results

1HQ5
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CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH S-(2-BORONOETHYL)-L-CYSTEINE, AN L-ARGININE ANALOGUE
Descriptor: ARGINASE 1, MANGANESE (II) ION, S-2-(BORONOETHYL)-L-CYSTEINE
Authors:Kim, N.N, Cox, J.D, Baggio, R.F, Emig, F.A, Mistry, S.K, Harper, S.L, Speicher, D.W, Morris Jr, S.M, Ash, D.E, Traish, A, Christianson, D.W.
Deposit date:2000-12-14
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Probing erectile function: S-(2-boronoethyl)-L-cysteine binds to arginase as a transition state analogue and enhances smooth muscle relaxation in human penile corpus cavernosum.
Biochemistry, 40, 2001
2MHI
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BU of 2mhi by Molmil
Solution structure of the CR4/5 domain of medaka telomerase RNA
Descriptor: Medaka telomerase RNA
Authors:Kim, N, Zhang, Q, Feigon, J.
Deposit date:2013-11-23
Release date:2013-12-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function.
Nucleic Acids Res., 42, 2014
2K95
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BU of 2k95 by Molmil
Solution structure of the wild-type P2B-P3 pseudoknot of human telomerase RNA
Descriptor: Telomerase RNA P2b-P3 pseudoknot
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
2K96
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Solution structure of the RDC-refined P2B-P3 pseudoknot from human telomerase RNA (delta U177)
Descriptor: TELOMERASE RNA P2B-P3 PSEUDOKNOT
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
2KYE
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BU of 2kye by Molmil
Solution structure of the pseudouridine modified P6.1 hairpin of human telomerase RNA
Descriptor: RNA (5'-R(*GP*AP*GP*AP*GP*(PSU)P*(PSU)P*GP*GP*GP*CP*(PSU)P*CP*(PSU)P*C)-3')
Authors:Kim, N.-K, Theimer, C.A, Mitchell, J.R, Collins, K, Feigon, J.
Deposit date:2010-05-25
Release date:2010-06-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Effect of pseudouridylation on the structure and activity of the catalytically essential P6.1 hairpin in human telomerase RNA.
Nucleic Acids Res., 38, 2010
8JZJ
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E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
Authors:Jang, K, Hlaing, S.H.S, Kim, H.G, Kim, N, Choe, H.W, Kim, Y.J.
Deposit date:2023-07-05
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
To Be Published
4R3R
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BU of 4r3r by Molmil
Crystal structures of EGFR in complex with Mig6
Descriptor: Epidermal growth factor receptor, peptide from ERBB receptor feedback inhibitor 1'
Authors:Park, E, Kim, N, Yi, Z, Cho, A, Kim, K, Ficarro, S.B, Park, A, Park, W.Y, Murray, B, Meyerson, M, Beroukim, R, Marto, J.A, Cho, J, Eck, M.J.
Deposit date:2014-08-17
Release date:2015-08-12
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6.
Nat.Struct.Mol.Biol., 22, 2015
4R3P
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Crystal structures of EGFR in complex with Mig6
Descriptor: Epidermal growth factor receptor, peptide from ERBB receptor feedback inhibitor 1
Authors:Park, E, Kim, N, Yi, Z, Cho, A, Kim, K, Ficarro, S.B, Park, A, Park, W.Y, Murray, B, Meyerson, M, Beroukim, R, Marto, J.A, Cho, J, Eck, M.J.
Deposit date:2014-08-17
Release date:2015-08-12
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (2.905 Å)
Cite:Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6.
Nat.Struct.Mol.Biol., 22, 2015
5HKN
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Crystal structure de novo designed fullerene organizing protein complex with fullerene
Descriptor: (C_{60}-I_{h})[5,6]fullerene, fullerene organizing protein
Authors:Paul, J, Acharya, R, Kim, K.-H, Kim, Y.H, Kim, N.H, Grigoryan, G, DeGardo, W.F.
Deposit date:2016-01-14
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Protein-directed self-assembly of a fullerene crystal.
Nat Commun, 7, 2016
7DNZ
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Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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BU of 7dny by Molmil
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7CHT
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BU of 7cht by Molmil
Crystal structure of TTK kinase domain in complex with compound 30
Descriptor: 2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(oxan-4-ylamino)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK, MAGNESIUM ION
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Ko, E.H, Choi, H.G, Son, J.B, Kim, N.D.
Deposit date:2020-07-06
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CHM
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BU of 7chm by Molmil
Crystal structure of TTK kinase domain in complex with compound 8
Descriptor: 4-(cyclohexylamino)-2-[(2-methoxy-4-morpholin-4-ylcarbonyl-phenyl)amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
Deposit date:2020-07-06
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CHN
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BU of 7chn by Molmil
Crystal structure of TTK kinase domain in complex with compound 9
Descriptor: 4-(cyclohexylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
Deposit date:2020-07-06
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CLH
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BU of 7clh by Molmil
Crystal structure of TTK kinase domain in complex with compound 19
Descriptor: 2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-4-(methylamino)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
Deposit date:2020-07-21
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CJA
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BU of 7cja by Molmil
Crystal structure of TTK kinase domain in complex with compound 28
Descriptor: 4-(cyclopentylmethylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
Deposit date:2020-07-09
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
7CIL
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BU of 7cil by Molmil
Crystal structure of TTK kinase domain in complex with compound 7
Descriptor: 4-(cyclohexylamino)-2-[(1-methylpyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, Dual specificity protein kinase TTK
Authors:Kim, H.L, Cho, H.Y, Park, Y.W, Lee, Y.H, Son, J.B, Ko, E.H, Choi, H.G, Kim, N.D.
Deposit date:2020-07-07
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray Crystal Structure-Guided Design and Optimization of 7 H -Pyrrolo[2,3- d ]pyrimidine-5-carbonitrile Scaffold as a Potent and Orally Active Monopolar Spindle 1 Inhibitor.
J.Med.Chem., 64, 2021
5ET3
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BU of 5et3 by Molmil
Crystal Structure of De novo Designed Fullerene organizing peptide
Descriptor: (C_{60}-I_{h})[5,6]fullerene, Fullerene Organizing Protein (C60Sol-COP-3)
Authors:Kim, K.-H, Kim, Y.H, Acharya, R, Kim, N.H, Paul, J, Grigoryan, G, DeGrado, W.F.
Deposit date:2015-11-17
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.671 Å)
Cite:Protein-directed self-assembly of a fullerene crystal.
Nat Commun, 7, 2016
7XX9
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Solution structure of RRM2 of Human SART3
Descriptor: Squamous cell carcinoma antigen recognized by T-cells 3
Authors:Kim, I, Bang, K.M, Park, C, Kim, N.K, Suh, J.Y.
Deposit date:2022-05-29
Release date:2023-08-30
Method:SOLUTION NMR
Cite:Solution structure of RRM1 of Human SART3
To Be Published
7XX8
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BU of 7xx8 by Molmil
Solution structure of RRM1 of Human SART3
Descriptor: Squamous cell carcinoma antigen recognized by T-cells 3
Authors:Kim, I, Bang, K.M, Park, C, Kim, N.K, Suh, J.Y.
Deposit date:2022-05-29
Release date:2023-08-30
Method:SOLUTION NMR
Cite:Solution structure of RRM1 of Human SART3
To Be Published
7CXY
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BU of 7cxy by Molmil
Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (zinc-bound form)
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
7CXX
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Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (disulfide-bonded form)
Descriptor: ACETATE ION, Carbonic anhydrase, SULFATE ION
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
7CXW
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Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (C116 flipped form)
Descriptor: ACETATE ION, Carbonic anhydrase
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J, Kim, N.J, Hong, S.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into novel mechanisms of inhibition of the major beta-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus.
J.Struct.Biol., 213, 2021
3ZR6
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BU of 3zr6 by Molmil
STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Deane, J.E, Graham, S.C, Kim, N.N, Stein, P.E, Mcnair, R, Cachon-Gonzalez, M.B, Cox, T.M, Read, R.J.
Deposit date:2011-06-14
Release date:2011-09-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Insights Into Krabbe Disease from Structures of Galactocerebrosidase.
Proc.Natl.Acad.Sci.USA, 108, 2011
4M6R
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BU of 4m6r by Molmil
Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme
Descriptor: Methylthioribulose-1-phosphate dehydratase, ZINC ION
Authors:Kang, W, Hong, S.H, Lee, H.M, Kim, N.Y, Lim, Y.C, Le, L.T.M, Lim, B, Kim, H.C, Kim, T.Y, Ashida, H, Yokota, A, Hah, S.S, Chun, K.H, Jung, Y.K, Yang, J.K.
Deposit date:2013-08-10
Release date:2014-01-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme.
Proc.Natl.Acad.Sci.USA, 111, 2014

 

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