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PDB: 272 results

6II6
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BU of 6ii6 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
Descriptor: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II0
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
Descriptor: GLYCEROL, Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6SDF
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BU of 6sdf by Molmil
N-terminal SH3 domain of Grb2 protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Growth factor receptor-bound protein 2
Authors:Bolgov, A.A, Korban, S.A, Luzik, D.A, Rogacheva, O.N, Zhemkov, V.A, Kim, M, Skrynnikov, N.R, Bezprozvanny, I.B.
Deposit date:2019-07-26
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the SH3 domain of growth factor receptor-bound protein 2.
Acta Crystallogr.,Sect.F, 76, 2020
6CIL
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BU of 6cil by Molmil
PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+
Descriptor: High mobility group protein B1, Intact 12RSS substrate forward strand, Intact 12RSS substrate reverse strand, ...
Authors:Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W.
Deposit date:2018-02-24
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Cracking the DNA Code for V(D)J Recombination.
Mol. Cell, 70, 2018
4WTH
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BU of 4wth by Molmil
Ataxin-3 Carboxy Terminal Region - Crystal C2 (triclinic)
Descriptor: Maltose-binding periplasmic protein, Ataxin-3 chimera, ZINC ION, ...
Authors:Zhemkov, V.A, Kim, M.
Deposit date:2014-10-30
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The 2.2-Angstrom resolution crystal structure of the carboxy-terminal region of ataxin-3.
FEBS Open Bio, 6, 2016
6CIM
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BU of 6cim by Molmil
Pre-Reaction Complex, RAG1(E962Q)/2-nicked/intact 12/23RSS complex in Mn2+
Descriptor: DNA (5'-D(*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3'), High mobility group protein B1, Intact 23RSS substrate forward strand, ...
Authors:Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W.
Deposit date:2018-02-24
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Cracking the DNA Code for V(D)J Recombination.
Mol. Cell, 70, 2018
1FYJ
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BU of 1fyj by Molmil
SOLUTION STRUCTURE OF MULTI-FUNCTIONAL PEPTIDE MOTIF-1 PRESENT IN HUMAN GLUTAMYL-PROLYL TRNA SYNTHETASE (EPRS).
Descriptor: MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE
Authors:Jeong, E.-J, Hwang, G.-S, Kim, K.H, Kim, M.J, Kim, S, Kim, K.-S.
Deposit date:2000-10-02
Release date:2001-03-14
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural analysis of multifunctional peptide motifs in human bifunctional tRNA synthetase: identification of RNA-binding residues and functional implications for tandem repeats.
Biochemistry, 39, 2000
4YS9
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Ataxin-3 Carboxy-Terminal Region - Crystal C1 (tetragonal)
Descriptor: Maltose-binding periplasmic protein, Ataxin-3 chimera, ZINC ION, ...
Authors:Zhemkov, V.A, Kim, M.
Deposit date:2015-03-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.2-Angstrom resolution crystal structure of the carboxy-terminal region of ataxin-3.
FEBS Open Bio, 6, 2016
1EA9
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Cyclomaltodextrinase
Descriptor: CYCLOMALTODEXTRINASE
Authors:Cho, H.-S, Kim, M.-S, Oh, B.-H.
Deposit date:2001-07-12
Release date:2002-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Cyclomaltodextrinase, Neopullulanase, and Maltogenic Amylase are Nearly Indistinguishable from Each Other
J.Biol.Chem., 277, 2002
8SLT
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BU of 8slt by Molmil
Crystal structure of human STEP (PTPN5) at physiological temperature (310 K) and ambient pressure (0.1 MPa)
Descriptor: SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
Authors:Ebrahim, A, Guerrero, L, Riley, B.T, Kim, M, Huang, Q, Finke, A.D, Keedy, D.A.
Deposit date:2023-04-24
Release date:2023-06-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of an atypical phosphatase.
Biorxiv, 2023
8SLS
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BU of 8sls by Molmil
Crystal structure of human STEP (PTPN5) at cryogenic temperature (100 K) and ambient pressure (0.1 MPa)
Descriptor: GLYCEROL, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
Authors:Ebrahim, A, Guerrero, L, Riley, B.T, Kim, M, Huang, Q, Finke, A.D, Keedy, D.A.
Deposit date:2023-04-24
Release date:2023-06-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of an atypical phosphatase.
Biorxiv, 2023
8SLU
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BU of 8slu by Molmil
Crystal structure of human STEP (PTPN5) at cryogenic temperature (100 K) and high pressure (205 MPa)
Descriptor: GLYCEROL, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
Authors:Ebrahim, A, Guerrero, L, Riley, B.T, Kim, M, Huang, Q, Finke, A.D, Keedy, D.A.
Deposit date:2023-04-24
Release date:2023-06-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Pushed to extremes: distinct effects of high temperature vs. pressure on the structure of an atypical phosphatase.
Biorxiv, 2023
2Z99
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BU of 2z99 by Molmil
Crystal Structure of ScpB from Mycobacterium tuberculosis
Descriptor: Putative uncharacterized protein
Authors:Kim, J.-S, Lee, S, Kang, B.S, Kim, M.H, Lee, H.-S, Kim, K.J.
Deposit date:2007-09-18
Release date:2007-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and domain characterization of ScpB from Mycobacterium tuberculosis
Proteins, 71, 2008
2RFG
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BU of 2rfg by Molmil
Crystal structure of dihydrodipicolinate synthase from Hahella chejuensis at 1.5A resolution
Descriptor: Dihydrodipicolinate synthase, ETHANOL, MAGNESIUM ION
Authors:Kang, B.S, Kim, M.H, Kim, G.H, Kim, K.J.
Deposit date:2007-09-29
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of dihydrodipicolinate synthase from Hahella chejuensis at 1.5A resolution
to be published
2GQU
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BU of 2gqu by Molmil
Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-Acetylenolpyruvylglucosamine Reductase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Eom, S.H, Kim, M.-K.
Deposit date:2006-04-21
Release date:2006-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus
Proteins, 66, 2006
2B8I
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BU of 2b8i by Molmil
Crystal Structure and Functional Studies Reveal that PAS Factor from Vibrio vulnificus is a Novel Member of the Saposin-Fold Family
Descriptor: PAS factor
Authors:Lee, J.H, Yang, S.T, Rho, S.H, Im, Y.J, Kim, S.Y, Kim, Y.R, Kim, M.K, Kang, G.B, Kim, J.I, Rhee, J.H, Eom, S.H.
Deposit date:2005-10-07
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and functional studies reveal that PAS factor from Vibrio vulnificus is a novel member of the saposin-fold family
J.Mol.Biol., 355, 2006
1SIX
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BU of 1six by Molmil
Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.-S, Kim, M, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-01
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
4GFX
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BU of 4gfx by Molmil
Crystal structure of the N-terminal domain of TXNIP
Descriptor: GLYCEROL, Thioredoxin-interacting protein
Authors:Hwang, J, Kim, M.H.
Deposit date:2012-08-04
Release date:2014-02-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein.
Nat Commun, 5, 2014
2VRC
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BU of 2vrc by Molmil
Crystal structure of the Citrobacter sp. triphenylmethane reductase complexed with NADP(H)
Descriptor: TRIPHENYLMETHANE REDUCTASE
Authors:Kim, Y, Park, H.J, Kwak, S.N, Lee, J.S, Oh, T.K, Kim, M.H.
Deposit date:2008-03-31
Release date:2008-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insight Into Bioremediation of Triphenylmethane Dyes by Citrobacter Sp. Triphenylmethane Reductase.
J.Biol.Chem., 283, 2008
2VRB
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BU of 2vrb by Molmil
Crystal structure of the Citrobacter sp. triphenylmethane reductase complexed with NADP(H)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIPHENYLMETHANE REDUCTASE
Authors:Kim, Y, Park, H.J, Kwak, S.N, Lee, J.S, Oh, T.K, Kim, M.H.
Deposit date:2008-03-31
Release date:2008-09-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insight Into Bioremediation of Triphenylmethane Dyes by Citrobacter Sp. Triphenylmethane Reductase.
J.Biol.Chem., 283, 2008
2G96
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Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase In Complex with Niconamide Mononucleotide
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide phosphoribosyltransferase
Authors:Eom, S.H, Kim, M.-K.
Deposit date:2006-03-05
Release date:2006-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
6E2B
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BU of 6e2b by Molmil
Ubiquitin in complex with Pt(2-phenilpyridine)(PPh3)
Descriptor: GLYCEROL, SULFATE ION, Ubiquitin, ...
Authors:Zhemkov, V.A, Kim, M.
Deposit date:2018-07-11
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reactions of Cyclometalated Platinum(II) [Pt(N∧C)(PR3)Cl] Complexes with Imidazole and Imidazole-Containing Biomolecules: Fine-Tuning of Reactivity and Photophysical Properties via Ligand Design.
Inorg Chem, 58, 2019
1XVW
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BU of 1xvw by Molmil
Crystal Structure of AhpE from Mycobacterium tuberculosis, a 1-Cys peroxiredoxin
Descriptor: Hypothetical protein Rv2238c/MT2298
Authors:Li, S, Peterson, N.A, Kim, M.Y, Kim, C.Y, Hung, L.W, Yu, M, Lekin, T, Segelke, B.W, Lott, J.S, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-10-28
Release date:2005-02-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of AhpE from Mycobacterium tuberculosis, a 1-Cys Peroxiredoxin
J.Mol.Biol., 346, 2005
1XXU
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Crystal Structure of AhpE from Mycrobacterium tuberculosis, a 1-Cys peroxiredoxin
Descriptor: Hypothetical protein Rv2238c/MT2298
Authors:Li, S, Peterson, N.A, Kim, M.Y, Kim, C.Y, Hung, L.W, Yu, M, Lekin, T, Segelke, B.W, Lott, J.S, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-11-08
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of AhpE from Mycobacterium tuberculosis, a 1-Cys Peroxiredoxin
J.Mol.Biol., 346, 2005
5C7W
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5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine.
Descriptor: 5'-monophosphate Z:P guanine riboswitch, COBALT HEXAMMINE(III), HYPOXANTHINE
Authors:Hernandez, A.R, Shao, Y, Hoshika, S, Yang, Z, Shelke, S.A, Herrou, J, Kim, H.-J, Kim, M.-J, Piccirilli, J.A, Benner, S.A.
Deposit date:2015-06-25
Release date:2015-08-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:A Crystal Structure of a Functional RNA Molecule Containing an Artificial Nucleobase Pair.
Angew.Chem.Int.Ed.Engl., 54, 2015

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