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1X3P
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3D solution structure of the Chromo-3 domain of cpSRP43
分子名称: cpSRP43
著者Leena, P.S.T, Kumar, T.K.S, Sivaraja, V, Henry, R, Yu, C.
登録日2005-05-10
公開日2005-09-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献3D Solution Structure of the Chromo-3 domain of cpSRP43
To be Published
3LWE
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BU of 3lwe by Molmil
The crystal structure of MPP8
分子名称: M-phase phosphoprotein 8
著者Li, Z, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2010-02-23
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
1AP0
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STRUCTURE OF THE CHROMATIN BINDING (CHROMO) DOMAIN FROM MOUSE MODIFIER PROTEIN 1, NMR, 26 STRUCTURES
分子名称: MODIFIER PROTEIN 1
著者Ball, L.J, Murzina, N.V, Broadhurst, R.W, Raine, A.R.C, Archer, S.J, Stott, F.J, Murzin, A.G, Singh, P.B, Domaille, P.J, Laue, E.D.
登録日1997-07-22
公開日1998-07-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of the chromatin binding (chromo) domain from mouse modifier protein 1.
EMBO J., 16, 1997
5JJZ
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Chromo domain of human Chromodomain Protein, Y-Like 2
分子名称: Chromodomain Y-like protein 2, LYS-LYS-LYS-ALA-ARG-MLY-SER-ALA-GLY-ALA-ALA-LYS-TYR
著者DONG, A, DOMBROVSKI, L, LOPPNAU, P, TEMPEL, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, MIN, J, WU, H, Structural Genomics Consortium (SGC)
登録日2016-04-25
公開日2016-05-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of CDYL2 domain of human CDYL2 protein
to be published
5AFW
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BU of 5afw by Molmil
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, ...
著者Metzger, E, Willmann, D, McMillan, J, Petroll, K, Metzger, P, Gerhardt, S, vonMaessenhausen, A, Schott, A.K, Espejo, A, Eberlin, A, Wohlwend, D, Schuele, K.M, Schleicher, M, Perner, S, Bedford, M.T, Dengjel, J, Flaig, R, Einsle, O, Schuele, R.
登録日2015-01-26
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Assembly of Methylated Kdm1A and Chd1 Drives Androgen Receptor-Dependent Transcription and Translocation.
Nat.Struct.Mol.Biol., 23, 2016
4HAE
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BU of 4hae by Molmil
Crystal structure of the CDYL2-chromodomain
分子名称: Chromodomain Y-like protein 2, SULFATE ION, UNKNOWN ATOM OR ION
著者Qin, S, Dombrovski, L, Tempel, W, Dong, A, Xu, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
登録日2012-09-26
公開日2012-10-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the CDYL2-chromodomain
To be Published
6MHA
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dHP1 Chromodomain Y24W variant bound to histone H3 peptide containing trimethyllysine
分子名称: Heterochromatin protein 1, histone H3 peptide containing trimethyllysine, H3K9me3
著者Brustad, E.M, Krone, M.W, Albanese, K.I, Waters, M.L.
登録日2018-09-17
公開日2019-09-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.497 Å)
主引用文献Thermodynamic consequences of Tyr to Trp mutations in the cation-pi-mediated binding of trimethyllysine by the HP1 chromodomain
Chem Sci, 11, 2020
6D08
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Crystal structure of an engineered bump-hole complex of mutant human chromobox homolog 1 (CBX1) with H3K9bn peptide
分子名称: Chromobox protein homolog 1, GLYCEROL, Histone H3.1, ...
著者Arora, S, Horne, W.S, Islam, K.
登録日2018-04-10
公開日2019-04-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Engineering Methyllysine Writers and Readers for Allele-Specific Regulation of Protein-Protein Interactions.
J.Am.Chem.Soc., 141, 2019
3TZD
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BU of 3tzd by Molmil
Crystal structure of the complex of Human Chromobox Homolog 3 (CBX3)
分子名称: Chromobox protein homolog 3, Histone H1.4
著者Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
登録日2011-09-27
公開日2012-03-07
最終更新日2013-01-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural basis of the chromodomain of Cbx3 bound to methylated peptides from histone h1 and G9a.
Plos One, 7, 2012
2KVM
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BU of 2kvm by Molmil
Solution structure of the CBX7 chromodomain in complex with a H3K27me2 peptide
分子名称: Chromobox protein homolog 7, histone H3 peptide (residues 15-30) with dimethylated lysine 27
著者Yap, K.L, Zeng, L, Zhou, M.
登録日2010-03-17
公開日2010-06-30
最終更新日2020-02-05
実験手法SOLUTION NMR
主引用文献Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a.
Mol.Cell, 38, 2010
8SII
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Crystal Structure of CBX7 with compound UNC4976
分子名称: CALCIUM ION, CHLORIDE ION, Chromobox protein homolog 7, ...
著者Song, X, Dong, A, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Crystal Structure of CBX7 with compound UNC4976
To be published
2L12
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BU of 2l12 by Molmil
Solution NMR structure of the chromobox protein 7 with H3K9me3
分子名称: Chromobox homolog 7, Histone H3
著者Kaustov, L, Lemak, A, Gutmanas, A, Fares, C, Quang, H, Loppnau, P, Min, J, Edwards, A, Arrowsmith, C, Structural Genomics Consortium (SGC)
登録日2010-07-22
公開日2010-08-04
最終更新日2020-02-05
実験手法SOLUTION NMR
主引用文献Recognition and specificity determinants of the human cbx chromodomains.
J.Biol.Chem., 286, 2011
8SP6
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BU of 8sp6 by Molmil
COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
分子名称: (1s,4s)-bicyclo[2.2.1]heptane, (5R0)FAL(MLZ)(5R5), Chromodomain Y-like protein 2, ...
著者Song, X, Beldar, S, Dong, A, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-05-02
公開日2024-03-13
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
To be published
3SVM
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BU of 3svm by Molmil
Human MPP8 - human DNMT3AK47me2 peptide
分子名称: DNA (cytosine-5)-methyltransferase 3A, M-phase phosphoprotein 8
著者Chang, Y, Horton, J.R, Zhang, X, Cheng, X.
登録日2011-07-12
公開日2011-11-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献MPP8 mediates the interactions between DNA methyltransferase Dnmt3a and H3K9 methyltransferase GLP/G9a.
Nat Commun, 2, 2011
6D07
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BU of 6d07 by Molmil
Crystal structure of the complex between human chromobox homolog 1 (CBX1) and H3K9me3 peptide
分子名称: Chromobox protein homolog 1, GLYCEROL, Histone H3.1
著者Arora, S, Horne, W.S, Islam, K.
登録日2018-04-10
公開日2019-04-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Engineering Methyllysine Writers and Readers for Allele-Specific Regulation of Protein-Protein Interactions.
J.Am.Chem.Soc., 141, 2019
1KNA
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BU of 1kna by Molmil
Chromo domain of HP1 complexed with histone H3 tail containing dimethyllysine 9.
分子名称: HETEROCHROMATIN PROTEIN 1, METHYLATED Histone H3
著者Jacobs, S.A, Khorasanizadeh, S.
登録日2001-12-18
公開日2002-03-20
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
Science, 295, 2002
1KNE
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Chromo domain of HP1 complexed with histone H3 tail containing trimethyllysine 9
分子名称: HETEROCHROMATIN PROTEIN 1, Trimethylated Histone H3
著者Jacobs, S.A, Khorasanizadeh, S.
登録日2001-12-18
公開日2002-03-20
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
Science, 295, 2002
1G6Z
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SOLUTION STRUCTURE OF THE CLR4 CHROMO DOMAIN
分子名称: CLR4 PROTEIN
著者Horita, D.A, Ivanova, A.V, Altieri, A.S, Klar, A.J, Byrd, R.A.
登録日2000-11-08
公開日2001-04-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure, domain features, and structural implications of mutants of the chromo domain from the fission yeast histone methyltransferase Clr4.
J.Mol.Biol., 307, 2001
6AT0
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BU of 6at0 by Molmil
Chromodomain HP1 with a p-nitro-L-phenylalanine mutation at position 24 bound to histone H3 peptide containing trimethyl lysine
分子名称: Heterochromatin protein 1, trimethyl lysine histone H3 tail peptide
著者Brustad, E.M, Baril, S.A, Waters, M.L.
登録日2017-08-27
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis.
J. Am. Chem. Soc., 139, 2017
6ASZ
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BU of 6asz by Molmil
Chromodomain HP1 with Y24F mutation bound to histone H3 peptide containing trimethyl lysine
分子名称: Heterochromatin protein 1, trimethyl lysine histone H3 tail peptide
著者Brustad, E.M, Baril, S.A, Waters, M.L.
登録日2017-08-27
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.518 Å)
主引用文献Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis.
J. Am. Chem. Soc., 139, 2017
1GUW
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STRUCTURE OF THE CHROMODOMAIN FROM MOUSE HP1beta IN COMPLEX WITH THE LYSINE 9-METHYL HISTONE H3 N-TERMINAL PEPTIDE, NMR, 25 STRUCTURES
分子名称: CHROMOBOX PROTEIN HOMOLOG 1, HISTONE H3.1
著者Nielsen, P.R, Nietlispach, D, Mott, H.R, Callaghan, J.M, Bannister, A, Kouzarides, T, Murzin, A.G, Murzina, N.V, Laue, E.D.
登録日2002-02-01
公開日2002-03-12
最終更新日2018-01-17
実験手法SOLUTION NMR
主引用文献Structure of the Hp1 Chromodomain Bound to Histone H3 Methylated at Lysine 9
Nature, 416, 2002
2H1E
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Tandem chromodomains of budding yeast CHD1
分子名称: Chromo domain protein 1
著者Flanagan IV, J.F, Khorasanizadeh, S.
登録日2006-05-16
公開日2007-03-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular Implications of Evolutionary Differences in CHD Double Chromodomains.
J.Mol.Biol., 369, 2007
7VYW
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Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide
分子名称: Chromo domain-containing protein LHP1, SULFATE ION, methylated histone H3K9 peptide
著者Liu, Y, Zhang, M, Min, J.
登録日2021-11-15
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
7VZ2
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Crystal structure of chromodomain of Arabidopsis LHP1
分子名称: Chromo domain-containing protein LHP1, UNKNOWN ATOM OR ION
著者Liu, Y, Min, J.
登録日2021-11-15
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
4QUC
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Crystal structure of chromodomain of Rhino
分子名称: RE36324p
著者Li, S, Patel, D.J.
登録日2014-07-10
公開日2014-08-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.502 Å)
主引用文献Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Genes Dev., 28, 2014

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