PDB: 928 件ウェブページステータス検索Chemie searchBIRD

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4LMZ	Structural insight into RNA recognition by RRM1+2 domain of human ETR-3 protein 分子名称: CUGBP Elav-like family member 2, RNA (5'-R(*GP*CP*UP*GP*CP*GP*UP*AP*UP*UP*GP*UP*UP*UP*G)-3') 著者 Bhatt, H, Manickam, Y, Bhavesh, N.S. 登録日 2013-07-11 公開日 2014-07-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 sequence specific RNA recognition of ETR3 RRM 1-2 domains TO BE PUBLISHED
4W90	Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, U1 small nuclear ribonucleoprotein A, ... 著者 Jones, C.P, Ferre-D'Amare, A.R. 登録日 2014-08-26 公開日 2014-10-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.118 Å) 主引用文献 Crystal structure of a c-di-AMP riboswitch reveals an internally pseudo-dimeric RNA. Embo J., 33, 2014
4YUD	Crystal structure of a RNA binding motif protein 39 (RBM39) from Homo sapiens at 1.28 A resolution 分子名称: RNA-binding protein 39 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) 登録日 2015-03-18 公開日 2015-04-01 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Crystal structure of a RNA binding motif protein 39 (RBM39) from Homo sapiens at 1.28 A resolution To be published
9GEA	Structure of UP1 S4DS6D phosphomimetic mutant 分子名称: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 著者 Dunnett, L, Prischi, F. 登録日 2024-08-07 公開日 2024-08-21 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Structure of UP1 S4DS6D phosphomimetic mutant To Be Published
3R1L	Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Mg2+ bound 分子名称: 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozyme, MAGNESIUM ION, ... 著者 Shechner, D.M, Bartel, D.P. 登録日 2011-03-10 公開日 2011-08-31 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.125 Å) 主引用文献 The structural basis of RNA-catalyzed RNA polymerization. Nat.Struct.Mol.Biol., 18, 2011
1ZZN	Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands. 分子名称: 197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ... 著者 Stahley, M.R, Strobel, S.A. 登録日 2005-06-14 公開日 2005-08-30 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.37 Å) 主引用文献 Structural evidence for a two-metal-ion mechanism of group I intron splicing. Science, 309, 2005
4Y00	Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Single-stranded DNA 分子名称: DNA (5'-D(P*TP*TP*GP*AP*GP*CP*GP*T)-3'), TAR DNA-binding protein 43 著者 Chiang, C.H, Kuo, P.H, Yang, W.Z, Yuan, H.S. 登録日 2015-02-05 公開日 2016-02-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation Sci Rep, 6, 2016
3S8S	Crystal structure of the RRM domain of human SETD1A 分子名称: Histone-lysine N-methyltransferase SETD1A, UNKNOWN ATOM OR ION 著者 Chao, X, Tempel, W, Bian, C, Cerovina, T, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2011-05-30 公開日 2011-06-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure of the RRM domain of human SETD1A to be published
4Y0F	Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA 分子名称: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43 著者 Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S. 登録日 2015-02-06 公開日 2016-02-10 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.648 Å) 主引用文献 Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation Sci Rep, 6, 2016
4IUF	Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA 分子名称: 5'-D(*GP*TP*TP*GP*(XUA)P*GP*CP*GP*T)-3', TAR DNA-binding protein 43 著者 Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yang, W.Z, Yuan, H.S. 登録日 2013-01-21 公開日 2014-01-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.752 Å) 主引用文献 The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids. Nucleic Acids Res., 42, 2014
4LJM	Crystal structure of C-terminal RNA recognition motif of human ETR3 分子名称: CUGBP Elav-like family member 2 著者 Kashyap, M, Sharma, A, Yogavel, M, Bhavesh, N.S. 登録日 2013-07-05 公開日 2014-07-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of C-terminal RNA recognition motif of human ETR3 To be Published
2X1F	Structure of Rna15 RRM with bound RNA (GU) 分子名称: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15 著者 Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A. 登録日 2010-01-06 公開日 2010-02-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors. Nucleic Acids Res., 38, 2010
7EB1	Solution NMR structure of the RRM domain of RNA binding protein RBM3 from homo sapiens 分子名称: RNA-binding protein 3 著者 Boral, S, Roy, S, Basak, A.J, Maiti, S, Lee, W, De, S. 登録日 2021-03-08 公開日 2021-12-08 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural and dynamic studies of the human RNA binding protein RBM3 reveals the molecular basis of its oligomerization and RNA recognition. Febs J., 289, 2022
2XS2	Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU 分子名称: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION 著者 Jenkins, H.T, Edwards, T.A. 登録日 2010-09-24 公開日 2011-10-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL. Proc. Natl. Acad. Sci. U.S.A., 108, 2011
1B7F	SXL-LETHAL PROTEIN/RNA COMPLEX 分子名称: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3') 著者 Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 1999-01-23 公開日 1999-05-03 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein. Nature, 398, 1999
1AUD	U1A-UTRRNA, NMR, 31 STRUCTURES 分子名称: RNA 3UTR, U1A 102 著者 Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G. 登録日 1997-08-22 公開日 1998-02-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural basis of the RNA-binding specificity of human U1A protein. EMBO J., 16, 1997
7JLY	Crystal Structure of RNA Binding Protein PG1 分子名称: ACETATE ION, CALCIUM ION, RNA-binding protein 著者 Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P. 登録日 2020-07-30 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 High Resolution Structure of RNA Binding Protein PG1 To be published
5WWE	Crystal structure of hnRNPA2B1 in complex with RNA 分子名称: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA (5'-R(*AP*GP*GP*GP*AP*CP*UP*AP*GP*A)-3') 著者 Wu, B.X, Su, S.C, Ma, J.B. 登録日 2017-01-01 公開日 2018-01-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1. Nat Commun, 9, 2018
5WWG	Crystal structure of hnRNPA2B1 in complex with AAGGACUUGC 分子名称: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA (5'-R(*AP*AP*GP*GP*AP*CP*UP*U)-3') 著者 Wu, B.X, Su, S.C, Ma, J.B. 登録日 2017-01-01 公開日 2018-01-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1. Nat Commun, 9, 2018
5MPG	Solution NMR structure of hnRNP A1 RRM1 in complex with 5'-UUAGGUC-3' RNA 分子名称: Heterogeneous nuclear ribonucleoprotein A1, RNA UUAGGUC 著者 Barraud, P, Allain, F.H.-T. 登録日 2016-12-16 公開日 2017-07-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7. Elife, 6, 2017
5X3Z	Solution structure of musashi1 RBD2 in complex with RNA 分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1 著者 Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M. 登録日 2017-02-09 公開日 2017-12-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA Molecules, 22, 2017
1JMT	X-ray Structure of a Core U2AF65/U2AF35 Heterodimer 分子名称: HEXANE-1,6-DIOL, SPLICING FACTOR U2AF 35 KDA SUBUNIT, SPLICING FACTOR U2AF 65 KDA SUBUNIT 著者 Kielkopf, C.L, Rodionova, N.A, Green, M.R, Burley, S.K. 登録日 2001-07-19 公開日 2001-09-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A novel peptide recognition mode revealed by the X-ray structure of a core U2AF35/U2AF65 heterodimer. Cell(Cambridge,Mass.), 106, 2001
1IQT	Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1) 分子名称: heterogeneous nuclear ribonucleoprotein D0 著者 Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S. 登録日 2001-08-01 公開日 2002-08-07 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA. J.Mol.Biol., 311, 2001
1L3K	UP1, THE TWO RNA-RECOGNITION MOTIF DOMAIN OF HNRNP A1 分子名称: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1 著者 Vitali, J, Ding, J, Jiang, J, Zhang, Y, Krainer, A.R, Xu, R.-M. 登録日 2002-02-27 公開日 2002-04-17 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Correlated alternative side chain conformations in the RNA-recognition motif of heterogeneous nuclear ribonucleoprotein A1. Nucleic Acids Res., 30, 2002
7S3B	Crystal structure of intact U2AF65 RRM-region bound to AdML-G5 oligonucleotide 分子名称: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(P*UP*UP*(UD)P*GP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit 著者 Jenkins, J.L, Henderson, S, Kielkopf, C.L. 登録日 2021-09-05 公開日 2022-05-25 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal. Nucleic Acids Res., 50, 2022

 

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