Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4LMZ
DownloadVisualize
BU of 4lmz by Molmil
Structural insight into RNA recognition by RRM1+2 domain of human ETR-3 protein
分子名称: CUGBP Elav-like family member 2, RNA (5'-R(*GP*CP*UP*GP*CP*GP*UP*AP*UP*UP*GP*UP*UP*UP*G)-3')
著者Bhatt, H, Manickam, Y, Bhavesh, N.S.
登録日2013-07-11
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献sequence specific RNA recognition of ETR3 RRM 1-2 domains
TO BE PUBLISHED
4W90
DownloadVisualize
BU of 4w90 by Molmil
Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MAGNESIUM ION, U1 small nuclear ribonucleoprotein A, ...
著者Jones, C.P, Ferre-D'Amare, A.R.
登録日2014-08-26
公開日2014-10-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.118 Å)
主引用文献Crystal structure of a c-di-AMP riboswitch reveals an internally pseudo-dimeric RNA.
Embo J., 33, 2014
4YUD
DownloadVisualize
BU of 4yud by Molmil
Crystal structure of a RNA binding motif protein 39 (RBM39) from Homo sapiens at 1.28 A resolution
分子名称: RNA-binding protein 39
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
登録日2015-03-18
公開日2015-04-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of a RNA binding motif protein 39 (RBM39) from Homo sapiens at 1.28 A resolution
To be published
9GEA
DownloadVisualize
BU of 9gea by Molmil
Structure of UP1 S4DS6D phosphomimetic mutant
分子名称: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-08-07
公開日2024-08-21
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure of UP1 S4DS6D phosphomimetic mutant
To Be Published
3R1L
DownloadVisualize
BU of 3r1l by Molmil
Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Mg2+ bound
分子名称: 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozyme, MAGNESIUM ION, ...
著者Shechner, D.M, Bartel, D.P.
登録日2011-03-10
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.125 Å)
主引用文献The structural basis of RNA-catalyzed RNA polymerization.
Nat.Struct.Mol.Biol., 18, 2011
1ZZN
DownloadVisualize
BU of 1zzn by Molmil
Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.
分子名称: 197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
著者Stahley, M.R, Strobel, S.A.
登録日2005-06-14
公開日2005-08-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Structural evidence for a two-metal-ion mechanism of group I intron splicing.
Science, 309, 2005
4Y00
DownloadVisualize
BU of 4y00 by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(P*TP*TP*GP*AP*GP*CP*GP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Yang, W.Z, Yuan, H.S.
登録日2015-02-05
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
3S8S
DownloadVisualize
BU of 3s8s by Molmil
Crystal structure of the RRM domain of human SETD1A
分子名称: Histone-lysine N-methyltransferase SETD1A, UNKNOWN ATOM OR ION
著者Chao, X, Tempel, W, Bian, C, Cerovina, T, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2011-05-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the RRM domain of human SETD1A
to be published
4Y0F
DownloadVisualize
BU of 4y0f by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA
分子名称: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43
著者Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S.
登録日2015-02-06
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.648 Å)
主引用文献Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation
Sci Rep, 6, 2016
4IUF
DownloadVisualize
BU of 4iuf by Molmil
Crystal Structure of Human TDP-43 RRM1 Domain in Complex with a Single-stranded DNA
分子名称: 5'-D(*GP*TP*TP*GP*(XUA)P*GP*CP*GP*T)-3', TAR DNA-binding protein 43
著者Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yang, W.Z, Yuan, H.S.
登録日2013-01-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.752 Å)
主引用文献The crystal structure of TDP-43 RRM1-DNA complex reveals the specific recognition for UG- and TG-rich nucleic acids.
Nucleic Acids Res., 42, 2014
4LJM
DownloadVisualize
BU of 4ljm by Molmil
Crystal structure of C-terminal RNA recognition motif of human ETR3
分子名称: CUGBP Elav-like family member 2
著者Kashyap, M, Sharma, A, Yogavel, M, Bhavesh, N.S.
登録日2013-07-05
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of C-terminal RNA recognition motif of human ETR3
To be Published
2X1F
DownloadVisualize
BU of 2x1f by Molmil
Structure of Rna15 RRM with bound RNA (GU)
分子名称: 5'-R(*GP*UP*UP*GP*UP)-3', MRNA 3'-END-PROCESSING PROTEIN RNA15
著者Pancevac, C, Goldstone, D.C, Ramos, A, Taylor, I.A.
登録日2010-01-06
公開日2010-02-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the RNA15 Rrm-RNA Complex Reveals the Molecular Basis of Gu Specificity in Transcriptional 3-End Processing Factors.
Nucleic Acids Res., 38, 2010
7EB1
DownloadVisualize
BU of 7eb1 by Molmil
Solution NMR structure of the RRM domain of RNA binding protein RBM3 from homo sapiens
分子名称: RNA-binding protein 3
著者Boral, S, Roy, S, Basak, A.J, Maiti, S, Lee, W, De, S.
登録日2021-03-08
公開日2021-12-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and dynamic studies of the human RNA binding protein RBM3 reveals the molecular basis of its oligomerization and RNA recognition.
Febs J., 289, 2022
2XS2
DownloadVisualize
BU of 2xs2 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU
分子名称: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011
1B7F
DownloadVisualize
BU of 1b7f by Molmil
SXL-LETHAL PROTEIN/RNA COMPLEX
分子名称: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3')
著者Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-01-23
公開日1999-05-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
1AUD
DownloadVisualize
BU of 1aud by Molmil
U1A-UTRRNA, NMR, 31 STRUCTURES
分子名称: RNA 3UTR, U1A 102
著者Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G.
登録日1997-08-22
公開日1998-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis of the RNA-binding specificity of human U1A protein.
EMBO J., 16, 1997
7JLY
DownloadVisualize
BU of 7jly by Molmil
Crystal Structure of RNA Binding Protein PG1
分子名称: ACETATE ION, CALCIUM ION, RNA-binding protein
著者Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P.
登録日2020-07-30
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献High Resolution Structure of RNA Binding Protein PG1
To be published
5WWE
DownloadVisualize
BU of 5wwe by Molmil
Crystal structure of hnRNPA2B1 in complex with RNA
分子名称: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA (5'-R(*AP*GP*GP*GP*AP*CP*UP*AP*GP*A)-3')
著者Wu, B.X, Su, S.C, Ma, J.B.
登録日2017-01-01
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1.
Nat Commun, 9, 2018
5WWG
DownloadVisualize
BU of 5wwg by Molmil
Crystal structure of hnRNPA2B1 in complex with AAGGACUUGC
分子名称: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA (5'-R(*AP*AP*GP*GP*AP*CP*UP*U)-3')
著者Wu, B.X, Su, S.C, Ma, J.B.
登録日2017-01-01
公開日2018-01-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1.
Nat Commun, 9, 2018
5MPG
DownloadVisualize
BU of 5mpg by Molmil
Solution NMR structure of hnRNP A1 RRM1 in complex with 5'-UUAGGUC-3' RNA
分子名称: Heterogeneous nuclear ribonucleoprotein A1, RNA UUAGGUC
著者Barraud, P, Allain, F.H.-T.
登録日2016-12-16
公開日2017-07-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7.
Elife, 6, 2017
5X3Z
DownloadVisualize
BU of 5x3z by Molmil
Solution structure of musashi1 RBD2 in complex with RNA
分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1
著者Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M.
登録日2017-02-09
公開日2017-12-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA
Molecules, 22, 2017
1JMT
DownloadVisualize
BU of 1jmt by Molmil
X-ray Structure of a Core U2AF65/U2AF35 Heterodimer
分子名称: HEXANE-1,6-DIOL, SPLICING FACTOR U2AF 35 KDA SUBUNIT, SPLICING FACTOR U2AF 65 KDA SUBUNIT
著者Kielkopf, C.L, Rodionova, N.A, Green, M.R, Burley, S.K.
登録日2001-07-19
公開日2001-09-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A novel peptide recognition mode revealed by the X-ray structure of a core U2AF35/U2AF65 heterodimer.
Cell(Cambridge,Mass.), 106, 2001
1IQT
DownloadVisualize
BU of 1iqt by Molmil
Solution structure of the C-terminal RNA-binding domain of heterogeneous nuclear ribonucleoprotein D0 (AUF1)
分子名称: heterogeneous nuclear ribonucleoprotein D0
著者Katahira, M, Miyanoiri, Y, Enokizono, Y, Matsuda, G, Nagata, T, Ishikawa, F, Uesugi, S.
登録日2001-08-01
公開日2002-08-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal RNA-binding domain of hnRNP D0 (AUF1), its interactions with RNA and DNA, and change in backbone dynamics upon complex formation with DNA.
J.Mol.Biol., 311, 2001
1L3K
DownloadVisualize
BU of 1l3k by Molmil
UP1, THE TWO RNA-RECOGNITION MOTIF DOMAIN OF HNRNP A1
分子名称: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
著者Vitali, J, Ding, J, Jiang, J, Zhang, Y, Krainer, A.R, Xu, R.-M.
登録日2002-02-27
公開日2002-04-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Correlated alternative side chain conformations in the RNA-recognition motif of heterogeneous nuclear ribonucleoprotein A1.
Nucleic Acids Res., 30, 2002
7S3B
DownloadVisualize
BU of 7s3b by Molmil
Crystal structure of intact U2AF65 RRM-region bound to AdML-G5 oligonucleotide
分子名称: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(P*UP*UP*(UD)P*GP*U)-D(P*(BRU))-R(P*CP*C)-3'), Splicing factor U2AF 65 kDa subunit
著者Jenkins, J.L, Henderson, S, Kielkopf, C.L.
登録日2021-09-05
公開日2022-05-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Pre-mRNA splicing factor U2AF2 recognizes distinct conformations of nucleotide variants at the center of the pre-mRNA splice site signal.
Nucleic Acids Res., 50, 2022

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon