6UMX
Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2017-08-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.620, 110.010, 293.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.430 - 2.790 |
R-factor | 0.2193 |
Rwork | 0.217 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 5GGU 5f3h 3hh2 3rjr & 5NTU |
RMSD bond length | 0.019 |
RMSD bond angle | 2.072 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 146.630 | 40.430 | 2.840 |
High resolution limit [Å] | 2.790 | 7.560 | 2.790 |
Rmeas | 0.079 | 0.032 | 1.487 |
Rpim | 0.035 | 0.014 | 0.645 |
Total number of observations | 12391 | 12976 | |
Number of reflections | 49196 | 2693 | 2467 |
<I/σ(I)> | 14.1 | 40.9 | 1.2 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 5.1 | 4.6 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 296 | 0.1 M sodium citrate, pH 5.5, 20% PEG3350, 15% 2-propanol, 3% trimethylamine N-oxide |