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2FMN
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BU of 2fmn by Molmil
Ala177Val mutant of E. coli Methylenetetrahydrofolate Reductase complex with LY309887
Descriptor: 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, N-[(5-{2-[(6R)-2-AMINO-4-OXO-3,4,5,6,7,8-HEXAHYDROPYRIDO[2,3-D]PYRIMIDIN-6-YL]ETHYL}-2-THIENYL)CARBONYL]-L-GLUTAMIC ACID
Authors:Pejchal, R, Campbell, E, Guenther, B.D, Lennon, B.W, Matthews, R.G, Ludwig, M.L.
Deposit date:2006-01-09
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Perturbations in the Ala -> Val Polymorphism of Methylenetetrahydrofolate Reductase: How Binding of Folates May Protect against Inactivation
Biochemistry, 45, 2006
2FMO
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BU of 2fmo by Molmil
Ala177Val mutant of E. coli Methylenetetrahydrofolate Reductase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Campbell, E, Guenther, B.D, Lennon, B.W, Matthews, R.G, Ludwig, M.L.
Deposit date:2006-01-09
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Perturbations in the Ala -> Val Polymorphism of Methylenetetrahydrofolate Reductase: How Binding of Folates May Protect against Inactivation
Biochemistry, 45, 2006
1ZP3
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BU of 1zp3 by Molmil
E. coli Methylenetetrahydrofolate Reductase (oxidized)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Sargeant, R, Ludwig, M.L.
Deposit date:2005-05-16
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction
Biochemistry, 44, 2005
1ZP4
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BU of 1zp4 by Molmil
Glu28Gln mutant of E. coli Methylenetetrahydrofolate Reductase (oxidized) complex with Methyltetrahydrofolate
Descriptor: 5,10-methylenetetrahydrofolate reductase, 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Sargeant, R, Ludwig, M.L.
Deposit date:2005-05-16
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction
Biochemistry, 44, 2005
1ZPT
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BU of 1zpt by Molmil
Escherichia coli Methylenetetrahydrofolate Reductase (reduced) complexed with NADH, pH 7.25
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Sargeant, R, Ludwig, M.L.
Deposit date:2005-05-17
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction
Biochemistry, 44, 2005
1ZRQ
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BU of 1zrq by Molmil
Escherichia coli Methylenetetrahydrofolate Reductase (reduced) complexed with NADH, pH 6.0
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Sargeant, R, Ludwig, M.L.
Deposit date:2005-05-19
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction
Biochemistry, 44, 2005
3MUG
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BU of 3mug by Molmil
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody PG16 Heavy Chain, ...
Authors:Pejchal, R, Walker, L.M, Burton, D.R, Wilson, I.A.
Deposit date:2010-05-03
Release date:2010-06-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure and function of broadly reactive antibody PG16 reveal an H3 subdomain that mediates potent neutralization of HIV-1.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MUH
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BU of 3muh by Molmil
Crystal structure of PG9 light chain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody PG9 light chain
Authors:Pejchal, R, Walker, L.M, Burton, D.R, Wilson, I.A.
Deposit date:2010-05-03
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and function of broadly reactive antibody PG16 reveal an H3 subdomain that mediates potent neutralization of HIV-1.
Proc.Natl.Acad.Sci.USA, 107, 2010
1T7L
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BU of 1t7l by Molmil
Crystal Structure of Cobalamin-Independent Methionine Synthase from T. maritima
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, MESO-ERYTHRITOL, SULFATE ION
Authors:Pejchal, R, Ludwig, M.L.
Deposit date:2004-05-10
Release date:2005-03-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication
Plos Biol., 3, 2005
1XDJ
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BU of 1xdj by Molmil
Crystal Structure of T. maritima Cobalamin-Independent Methionine Synthase complexed with Zn2+ and Homocysteine
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, MESO-ERYTHRITOL, ...
Authors:Pejchal, R, Ludwig, M.L.
Deposit date:2004-09-06
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication
Plos Biol., 3, 2005
1XPG
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BU of 1xpg by Molmil
Crystal Structure of T. maritima Cobalamin-Independent Methionine Synthase complexed with Zn2+ and Methyltetrahydrofolate
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, MESO-ERYTHRITOL, ...
Authors:Pejchal, R, Ludwig, M.L.
Deposit date:2004-10-08
Release date:2005-03-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication
Plos Biol., 3, 2005
1XR2
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BU of 1xr2 by Molmil
Crystal Structure of oxidized T. maritima Cobalamin-Independent Methionine Synthase complexed with Methyltetrahydrofolate
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, MESO-ERYTHRITOL, ...
Authors:Pejchal, R, Ludwig, M.L.
Deposit date:2004-10-13
Release date:2005-03-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cobalamin-independent methionine synthase (MetE): a face-to-face double barrel that evolved by gene duplication
Plos Biol., 3, 2005
3TV3
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BU of 3tv3 by Molmil
Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with Man9
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMYLAMINE, GLYCEROL, ...
Authors:Pejchal, R, Wilson, I.A.
Deposit date:2011-09-19
Release date:2011-10-19
Last modified:2021-04-28
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield.
Science, 334, 2011
3TWC
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BU of 3twc by Molmil
Crystal structure of broad and potent HIV-1 neutralizing antibody PGT127 in complex with Man9
Descriptor: AMYLAMINE, PGT127 heavy chain, Ig gamma-1 chain C region, ...
Authors:Pejchal, R, Wilson, I.A.
Deposit date:2011-09-21
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield.
Science, 334, 2011
3TYG
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BU of 3tyg by Molmil
Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with a glycosylated engineered gp120 outer domain with miniV3 (eODmV3)
Descriptor: Envelope glycoprotein gp160, PGT128 heavy chain, Ig gamma-1 chain C region, ...
Authors:Pejchal, R, Huang, P.S, Schief, W.R, Stanfield, R.L, Wilson, I.A.
Deposit date:2011-09-25
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield.
Science, 334, 2011
3FN0
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BU of 3fn0 by Molmil
Crystal structure of HIV-1 neutralizing human Fab Z13e1 in complex with a 12-residue peptide containing the Z13e1 epitope on gp41
Descriptor: Envelope polyprotein gp160, Fab Z13e1
Authors:Pejchal, R, Wilson, I.A, Zwick, M.B.
Deposit date:2008-12-22
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A conformational switch in human immunodeficiency virus gp41 revealed by the structures of overlapping epitopes recognized by neutralizing antibodies.
J.Virol., 83, 2009
3BQ6
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BU of 3bq6 by Molmil
Crystal Structure of T. maritima Cobalamin-Independent Methionine Synthase complexed with Zn2+ (Monoclinic)
Descriptor: 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, ZINC ION
Authors:Pejchal, R, Smith, J.L, Ludwig, M.L.
Deposit date:2007-12-19
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Metal active site elasticity linked to activation of homocysteine in methionine synthases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BQ5
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BU of 3bq5 by Molmil
Crystal Structure of T. maritima Cobalamin-Independent Methionine Synthase complexed with Zn2+ and Homocysteine (Monoclinic)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, ...
Authors:Pejchal, R, Smith, J.L, Ludwig, M.L.
Deposit date:2007-12-19
Release date:2008-03-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metal active site elasticity linked to activation of homocysteine in methionine synthases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3Q1S
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BU of 3q1s by Molmil
HIV-1 neutralizing antibody Z13e1 in complex with epitope display protein
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Interleukin-22, ...
Authors:Stanfield, R.L, Julien, J.-P, Pejchal, R, Gach, J.S, Zwick, M.B, Wilson, I.A.
Deposit date:2010-12-17
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Based Design of a Protein Immunogen that Displays an HIV-1 gp41 Neutralizing Epitope.
J.Mol.Biol., 414, 2011
8F0L
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BU of 8f0l by Molmil
Crystal Structure of the Human T cell Receptor CD3(EPSILON) N-Terminal Peptide Complexed with ADI-26906 FAB
Descriptor: ADI-26906 Fab Heavy Chain, ADI-26906 Fab Light Chain, GLYCEROL, ...
Authors:Battles, M.B, Welin, M.
Deposit date:2022-11-03
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure-based engineering of a novel CD3 epsilon-targeting antibody for reduced polyreactivity.
Mabs, 15, 2023
4JY6
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BU of 4jy6 by Molmil
Crystal structure of human Fab PGT123, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor: GLYCEROL, PGT123 heavy chain, PGT123 light chain, ...
Authors:Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:2013-03-29
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Broadly Neutralizing Antibody PGT121 Allosterically Modulates CD4 Binding via Recognition of the HIV-1 gp120 V3 Base and Multiple Surrounding Glycans.
Plos Pathog., 9, 2013
4JY5
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BU of 4jy5 by Molmil
Crystal structure of human Fab PGT122, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor: GLYCEROL, PGT122 heavy chain, PGT122 light chain
Authors:Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:2013-03-29
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans.
Plos Pathog., 9, 2013
4JY4
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BU of 4jy4 by Molmil
Crystal structure of human Fab PGT121, a broadly reactive and potent HIV-1 neutralizing antibody
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PGT121 heavy chain, ...
Authors:Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
Deposit date:2013-03-29
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans.
Plos Pathog., 9, 2013
3U4B
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BU of 3u4b by Molmil
CH04H/CH02L Fab P4
Descriptor: CH02 Light chain, CH04 Heavy chain
Authors:Pancera, M, Louder, R, Mclellan, J.S, KWong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.893 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011
3U46
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BU of 3u46 by Molmil
CH04H/CH02L P212121
Descriptor: CH02 Light chain Fab, CH04 Heavy chain Fab
Authors:Louder, R, Pancera, M, McLellan, J.S, Kwong, P.D.
Deposit date:2011-10-07
Release date:2011-11-30
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Nature, 480, 2011

 

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