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Theoretical models

... ON 1KCA R.CHATTOPADHYAYA,K.GHOSH DisplayDownload 1lwzHUMAN DNA TOPOISOMERASE II, ALPHA ISOZYME A.DASH DisplayDownload ... 1qarP22 C2 REPRESSOR DIMER MODEL BOUND TO OPERATOR DNA R.CHATTOPADHYAYA,K.GHOSH DisplayDownload 1qbcHEXOSAMINIDASE ALPHA CHAIN, ...

SeSAW Tutorial

... model. Helicases stabilize the unwinding of double-stranded nucleaotides (DNA or RNA). Given the fact that nucleotides are negatively ... immune response receptors: TLR-9 detects unmethylated CpG DNA and TLR-1 detects lipoproteins derived from bacteria. ...

About Functional Details page

... site(BINDING) for BINDING - other interesting site(SITE) for SITE - DNA-binding region(DNA_BIND) for DNA_BIND - Nucleotide phosphate binding region(NP_BIND) for NP_BIND ...

MAFFTash

... (2004) Link 4. Katoh, Asimenos, Toh,Multiple Alignment of DNA Sequences with MAFFT. In Bioinformatics for DNA Sequence Analysis edited by D. Posada, Methods in Molecular ...

GIRAF

... for polymeric molecules such as polypeptide (less than 25 amino acid residues), DNA (polydeoxyribonucleotide), RNA (polyribonucleotide), or sugar. They are linked to the PDBe (formerly ...

Derived databases

... degrees of freedom, and take into computation not only proteins but also DNA, RNA, and ligand molecules (hydrogen atoms and water molecules are excluded currently ...

[wwPDB] PDB Reaches a New Milestone: 200,000+ Entries

... , scientists had their first direct look at the structures of proteins and DNA at the atomic level. Determination of these early three-dimensional structures by ...

November 24, 2021 (Wed), "PDB50 Anniversary Symposium in Asia" will be held online

... the annual meeting. Themes of Poster - Protein Structure and Supramolecular complexes - RNA/DNA molecular machines - Application of Structural Biology - X-ray/XFEL - NMR - 3DEM - Bioinformatics ...

[wwPDB] Prizes Awarded at The Biophysical Society Japan Meeting

... Replication-dependent histone (Repli-Histo) labeling revealed that chromatin motion can determine DNA replication timing Katsuhiko Minami (1,2), Satoru Ide (1,2), Sachiko Tamura ...

[wwPDB] CASP16 Call for Targets

... RNA protein-complexes included [7]. CASP needs a wide variety of RNA, DNA, and complexes as targets to see if this situation has changed. (This ...

Links

... - Japan alliance for Bioscience Information (JBI) - Database Center for Life Science (DBCLS) - DNA Data Bank of Japan (DDBJ) - National Bioscience Database Center (JST-NBDC) - Research ...

What is ProMode-Elastic

... full-atom model, and take into computation not only proteins but also DNA, RNA, and ligand molecules (hydrogen atoms and water molecules are excluded currently ...

alignment

... acids (in the case of proteins) or nuceotides (in the case of DNA or RNA). In the case of proteins, we usually consider two basic ...

Advanced search

... L-amino acids - Polypeptide(D):polypeptide composed of D-amino acids - polydeoxyribonucleotide:DNA chain composed of deoxyribonucleotide - polyribonucleotide:RNA chain composed of ribonucleotid - polysaccharide(D ...

JBI (Japan alliance for Bioscience Information) portal site is now open.

... for Life Science (DBCLS)/Joint Support-Center for Data Science Research/ROIS, DNA Data Bank of Japan (DDBJ)/National Institute of Genetics/ROIS. This portal ...

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PDB entries from 2024-08-28

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