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Info pages: 534 results

SeSAW Tutorial

In this tutorial, we provide explanation about the SeSAW, one of the service of PDBj. See also the SeSAW documentation about basic things such as used technique. - Submitting PDB entries to SeSAW - Submitting structures to SeSAW - Experimental ...

structural domain

A structural domain is a level of organization that is intermediate between secondary structure and tertiary structure. For single domain structures, a structural domain can be thought of as being equivalent to the tertiary structure, with the caveat that ...

Functional annotation example

[Functional Annotation of] 1uan 1uan (TT1542 from Thermus thermophilus HB8) is a structural genomics (SG) target solved as part of the Protein 3000 project in Japan [1]. At the time the structure was solved, there were no PDB entries with significant ...

Structure Prediction

- CRNPRED (Structure prediction service based on the sequence) - Spanner (Structure prediction service using structure known molecules with similar sequence) - SFAS (Multiple service both sequence alignment and structure prediction) [CRNPRED] CRNPRED is ...

eProtS

[Encyclopedia of Protein Structures] https://pdbj.org//eprots/ The eProtS, Encyclopedia of Protein Structure, is a dictionary with pictures of the protein three-dimensional structures, for understanding the tertiary structures and the biological ...

Sequence Navigator

URL: https://pdbj.org/seqNavi [Overview] Sequence Navigator is a BLAST interface to PDBj. The input to Sequence Navigator can be a PDB ID or an amino acid sequence. The output is a set of BLAST alignments to homologous PDB entries. There are options for ...

jV

Web page : https://pdbj.org//jv/index.html Original Manual in English : http://ef-site.hgc.jp/eF-site/jV/jV_manual.html Japanese version with some usage example : https://pdbj.org//jv/manual/index_ja.html Help page in English : http://ef-site.hgc.jp/ ...

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PDB entries from 2024-06-12

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