PDB: 2231 件ウェブページステータス検索Chemie searchBIRD

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138D	A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORM 分子名称: DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3') 著者 Ramakrishnan, B, Sundaralingam, M. 登録日 1993-09-15 公開日 1994-01-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures. Biochemistry, 32, 1993
137D	A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORM 分子名称: DNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3') 著者 Ramakrishnan, B, Sundaralingam, M. 登録日 1993-09-15 公開日 1994-01-15 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures. Biochemistry, 32, 1993
1LQG	ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN 分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR 著者 Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M. 登録日 2002-05-10 公開日 2002-11-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG. Acta Crystallogr.,Sect.D, 58, 2002
1LQJ	ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE 分子名称: URACIL-DNA GLYCOSYLASE 著者 Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Varshney, U, Vijayan, M. 登録日 2002-05-10 公開日 2002-11-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG. Acta Crystallogr.,Sect.D, 58, 2002
4EE5	Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with trisaccharide from Lacto-N-neotetraose 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Beta-1,4-galactosyltransferase 1, GLYCEROL, ... 著者 Ramakrishnan, B, Qasba, P.K. 登録日 2012-03-28 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode. J.Biol.Chem., 287, 2012
4EEM	Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with GLCNAC-BETA1,6-MAN-ALPHA-methyl 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-methyl alpha-D-mannopyranoside, Beta-1,4-galactosyltransferase 1, GLYCEROL, ... 著者 Ramakrishnan, B, Qasba, P.K. 登録日 2012-03-28 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode. J.Biol.Chem., 287, 2012
4EE3	Crystal structure of human M340H-beta-1,4-galactosyltransferase-1 (M340H-B4GAL-T1) in complex with pentasaccharide 分子名称: 6-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE, Beta-1,4-galactosyltransferase 1, GLYCEROL, ... 著者 Ramakrishnan, B, Qasba, P.K. 登録日 2012-03-28 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Binding of N-acetylglucosamine (GlcNAc) beta 1-6-branched oligosaccharide acceptors to beta 4-galactosyltransferase I reveals a new ligand binding mode. J.Biol.Chem., 287, 2012
5CBG	Calcium activated non-selective cation channel 分子名称: CALCIUM ION, DECYL-BETA-D-MALTOPYRANOSIDE, Ion transport 2 domain protein 著者 Dhakshnamoorthy, B, Rohaim, A, Rui, H, Blachowicz, L, Roux, B. 登録日 2015-06-30 公開日 2016-07-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.14 Å) 主引用文献 Structural and functional characterization of a calcium-activated cation channel from Tsukamurella paurometabola. Nat Commun, 7, 2016
5C9S	Crystal Structure of the C-terminal domain of Rrp5 分子名称: GLYCEROL, rRNA biogenesis protein RRP5 著者 Khoshnevis, S, Karbstein, K. 登録日 2015-06-28 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of the C-terminal domain of Rrp5 Plos Biol., 2016
7O3O	Structure of haloalkane dehalogenase mutant DhaA80(T148L, G171Q, A172V, C176F) from Rhodococcus rhodochrous with ionic liquid 分子名称: CHLORIDE ION, ETHANOLAMINE, Haloalkane dehalogenase 著者 Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I. 登録日 2021-04-02 公開日 2021-09-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids Crystals, 11, 2021
7O8B	Structure of haloalkane dehalogenase variant DhaA80 from Rhodococcus rhodochrous 分子名称: Haloalkane dehalogenase, methyl sulfate 著者 Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I. 登録日 2021-04-15 公開日 2021-09-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids Crystals, 11, 2021
5Z19	The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine 分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Beta-glucuronidase 著者 Dashnyam, P, Lin, H.Y, Lin, C.H. 登録日 2017-12-25 公開日 2018-12-12 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.503 Å) 主引用文献 Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity To Be Published
5Z1A	The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine 分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Putative beta-galactosidase 著者 Dashnyam, P, Lin, H.Y, Lin, C.H. 登録日 2017-12-25 公開日 2018-12-12 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.859 Å) 主引用文献 Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity To Be Published
5Z18	The crystal structure of Ruminococcus gnavus beta-glucuronidase 分子名称: Beta-glucuronidase 著者 Dashnyam, P, Lin, H.Y, Lin, C.H. 登録日 2017-12-25 公開日 2018-12-12 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.495 Å) 主引用文献 Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity To Be Published
5Z1B	Structure of Bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-O-glucuronide 分子名称: 3-HYDROXY-2H-CHROMEN-2-ONE, Glycosyl hydrolase family 2, TIM barrel domain protein, ... 著者 Dashnyam, P, Lin, H.Y, Lin, C.H. 登録日 2017-12-25 公開日 2018-12-12 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity To Be Published
1WQG	Crystal structure of ribosome recycling factor from Mycobacterium Tuberculosis 分子名称: CADMIUM ION, Ribosome recycling factor 著者 Saikrishnan, K, Kalapala, S.K, Varshney, U, Vijayan, M. 登録日 2004-09-29 公開日 2005-02-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 X-ray structural studies of Mycobacterium tuberculosis RRF and a comparative study of RRFs of known structure. Molecular plasticity and biological implications J.Mol.Biol., 345, 2005
1WQF	Crystal structure of Ribosome recycling factor from Mycobacterium Tuberculosis 分子名称: CADMIUM ION, Ribosome recycling factor 著者 Saikrishnan, K, Kalapala, S.K, Varshney, U, Vijayan, M. 登録日 2004-09-28 公開日 2005-02-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 X-ray structural studies of Mycobacterium tuberculosis RRF and a comparative study of RRFs of known structure. Molecular plasticity and biological implications J.Mol.Biol., 345, 2005
1WQH	Crystal structure of ribosome recycling factor from Mycobacterium tuberculosis 分子名称: CADMIUM ION, Ribosome recycling factor 著者 Saikrishnan, K, Kalapala, S.K, Varshney, U, Vijayan, M. 登録日 2004-09-29 公開日 2005-02-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 X-ray structural studies of Mycobacterium Tuberculosis RRF and a comparative study of RRFS of known structure. Molecular plasticity and biological implications J.Mol.Biol., 345, 2005
1X3E	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium smegmatis 分子名称: CADMIUM ION, Single-strand binding protein 著者 Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. 登録日 2005-05-04 公開日 2005-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
1X3G	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS 分子名称: CADMIUM ION, Single-strand binding protein 著者 Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. 登録日 2005-05-05 公開日 2005-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
1X3F	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS 分子名称: CADMIUM ION, Single-strand binding protein 著者 Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. 登録日 2005-05-05 公開日 2005-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
7VSR	Structure of McrBC (stalkless mutant) 分子名称: 5-methylcytosine-specific restriction enzyme B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Saikrishnan, K, Adhav, V.A, Bose, S, Kutti R, V. 登録日 2021-10-27 公開日 2023-02-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure of McrBC (stalkless mutant) To Be Published
3U44	Crystal structure of AddAB-DNA complex 分子名称: ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease subunit A, DNA (36-MER), ... 著者 Saikrishnan, K, Krajewski, W, Wigley, D. 登録日 2011-10-07 公開日 2012-03-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.201 Å) 主引用文献 Insights into Chi recognition from the structure of an AddAB-type helicase-nuclease complex. Embo J., 31, 2012
149D	SOLUTION STRUCTURE OF A PYRIMIDINE(DOT)PURINE(DOT) PYRIMIDINE DNA TRIPLEX CONTAINING T(DOT)AT, C+(DOT)GC AND G(DOT)TA TRIPLES 分子名称: 5'-D(*CP*CP*TP*AP*TP*TP*C)-3', 5'-D(*CP*TP*TP*GP*TP*CP*C)-3', 5'-D(*GP*AP*AP*TP*AP*GP*G)-3' 著者 Radhakrishnan, I, Patel, D.J. 登録日 1993-11-15 公開日 1994-04-30 最終更新日 2022-02-16 実験手法 SOLUTION NMR 主引用文献 Solution structure of a pyrimidine.purine.pyrimidine DNA triplex containing T.AT, C+.GC and G.TA triples. Structure, 2, 1994
4RND	Crystal Structure of the subunit DF-assembly of the eukaryotic V-ATPase. 分子名称: GLYCEROL, V-type proton ATPase subunit D, V-type proton ATPase subunit F 著者 Balakrishna, A.M, Basak, S, Gruber, G. 登録日 2014-10-24 公開日 2014-12-10 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.18 Å) 主引用文献 Crystal Structure of Subunits D and F in Complex Gives Insight into Energy Transmission of the Eukaryotic V-ATPase from Saccharomyces cerevisiae. J.Biol.Chem., 290, 2015

 

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