138D

A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORM

Summary for 138D

DescriptorDNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3') (2 entities in total)
Functional Keywordsa-dna, double helix, dna
Total number of polymer chains1
Total molecular weight3046.98
Authors
Ramakrishnan, B.,Sundaralingam, M. (deposition date: 1993-09-15, release date: 1994-01-15, Last modification date: 2011-07-13)
Primary citation
Ramakrishnan, B.,Sundaralingam, M.
Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
Biochemistry, 32:11458-11468, 1993
PubMed: 8218212 (PDB entries with the same primary citation)
DOI: 10.1021/bi00093a025
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
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Structure validation

ClashscoreRSRZ outliers00MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 138d
no rotation
Molmil generated image of 138d
rotated about x axis by 90°
Molmil generated image of 138d
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 138d
no rotation
Molmil generated image of 138d
rotated about x axis by 90°
Molmil generated image of 138d
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (138d.pdb1.gz [8.44 KB])