PDB: 220113 件ウェブページステータス検索Chemie searchBIRD

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5EMB	Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif 分子名称: GLU-GLU-TRP-SEP-THR-VAL-MET, Sorting nexin-27 著者 Collins, B.M, Clairfeuille, T. 登録日 2015-11-06 公開日 2016-09-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex. Nat.Struct.Mol.Biol., 23, 2016
4HIF	Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions 分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE (FULLY PROTONATED FORM), ... 著者 Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M. 登録日 2012-10-11 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions. Acta Crystallogr.,Sect.D, 69, 2013
1PJX	0.85 ANGSTROM STRUCTURE OF SQUID GANGLION DFPASE 分子名称: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, ... 著者 Koepke, J, Rueterjans, H, Luecke, C, Fritzsch, G. 登録日 2003-06-04 公開日 2004-06-08 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 A resolution. Acta Crystallogr.,Sect.D, 59, 2003
3U7T	Room temperature ultra-high resolution time-of-flight neutron and X-ray diffraction studies of H/D exchanged crambin 分子名称: Crambin 著者 Chen, J.C.-H. 登録日 2011-10-14 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Room-temperature ultrahigh-resolution time-of-flight neutron and X-ray diffraction studies of H/D-exchanged crambin. Acta Crystallogr.,Sect.F, 68, 2012
4I8K	Bovine trypsin at 0.85 resolution 分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ... 著者 Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A. 登録日 2012-12-03 公開日 2012-12-19 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin. Acta Crystallogr.,Sect.D, 69, 2013
1PQ5	Trypsin at pH 5, 0.85 A 分子名称: ARGININE, SULFATE ION, Trypsin 著者 Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S. 登録日 2003-06-18 公開日 2003-11-11 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem., 278, 2003
4D5M	Gonadotropin-releasing hormone agonist 分子名称: PHOSPHATE ION, TRIPTORELIN 著者 Legrand, P, Le Du, M.-H, Valery, C, Deville-Foillard, S, Paternostre, M, Artzner, F. 登録日 2014-11-05 公開日 2015-08-12 最終更新日 2020-03-11 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Atomic View of the Histidine Environment Stabilizing Higher- Ph Conformations of Ph-Dependent Proteins. Nat.Commun., 6, 2015
2OL9	Peptide corresponding to residues 170-175 of human prion 分子名称: peptide from human prion 著者 Apostol, M.A, Sawaya, M.R, Eisenberg, D. 登録日 2007-01-18 公開日 2007-01-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Atomic structures of amyloid cross-beta spines reveal varied steric zippers. Nature, 447, 2007
2PF8	Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is equal to concentration of IDD594. 分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ... 著者 Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A. 登録日 2007-04-04 公開日 2007-04-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal packing modifies ligand binding affinity: The case of aldose reductase. Proteins, 80, 2012
2PFH	Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is less than concentration of IDD594. 分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ... 著者 Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A. 登録日 2007-04-05 公開日 2007-04-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal packing modifies ligand binding affinity: The case of aldose reductase. Proteins, 80, 2012
5NQI	E.coli 16S rRNA Sarcin-Ricin Loop containing a 5-hydroxymethylcytosine modification 分子名称: E.Coli 27-mer SRL RNA 著者 Ennifar, E, Micura, R. 登録日 2017-04-20 公開日 2017-07-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine. J. Org. Chem., 82, 2017
6Q01	TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 2 分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, MAGNESIUM ION, ... 著者 Schellenberg, M.J, Krahn, J.M, Williams, R.S. 登録日 2019-08-01 公開日 2020-04-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Ubiquitin stimulated reversal of topoisomerase 2 DNA-protein crosslinks by TDP2. Nucleic Acids Res., 48, 2020
5MRX	27-nt SRL with a 5-hydroxymethyl cytidine modification 分子名称: RNA (27-MER) 著者 Ennifar, E, Micura, R. 登録日 2016-12-28 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine J.Org.Chem., 2017
6KL1	Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5 分子名称: Green fluorescent protein 著者 Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K. 登録日 2019-07-28 公開日 2019-12-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions Acta Crystallogr.,Sect.D, 75, 2019
5D9E	Crystal Structure of the Proline-rich Lasso Peptide Caulosegnin II 分子名称: CHLORIDE ION, Caulosegnin II 著者 Fage, C.D, Hegemann, J.D, Harms, K, Marahiel, M.A. 登録日 2015-08-18 公開日 2016-02-17 最終更新日 2019-05-08 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 The ring residue proline 8 is crucial for the thermal stability of the lasso peptide caulosegnin II. Mol Biosyst, 12, 2016
5MNN	Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K) 分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ... 著者 Schiebel, J, Heine, A, Klebe, G. 登録日 2016-12-13 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes. Nat Commun, 9, 2018
2PYA	Ultra-high resolution structure of P. abyssi rubredoxin W4L/R5S/A44S 分子名称: FE (III) ION, Rubredoxin, SODIUM ION 著者 Boenisch, H, Ladenstein, R. 登録日 2007-05-16 公開日 2008-04-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin: II. Introduction of an O-H...Sgamma-Fe hydrogen bond increased the reduction potential by 65 mV. J.Biol.Inorg.Chem., 12, 2007
8U2B	Cryo-EM structure of C.crescentus bNY30a pilus complex 分子名称: Flp family type IVb pilin 著者 Wang, Y, Zhang, J. 登録日 2023-09-05 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (0.86 Å) 主引用文献 Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus. Sci Adv, 10, 2024
8K9N	Subatomic resolution structure of Pseudoazurin from Alcaligenes faecalis 分子名称: COPPER (II) ION, Pseudoazurin, SULFATE ION 著者 Fukuda, Y, Lintuluoto, M, Kurihara, K, Hasegawa, K, Inoue, T, Tamada, T. 登録日 2023-08-01 公開日 2024-02-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Overlooked Hydrogen Bond in a Blue Copper Protein Uncovered by Neutron and Sub- angstrom ngstrom Resolution X-ray Crystallography. Biochemistry, 63, 2024
1ALZ	GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE) 分子名称: ETHANOL, ILE-GRAMICIDIN C, VAL-GRAMICIDIN A 著者 Burkhart, B.M, Pangborn, W.A, Duax, W.L, Langs, D.A. 登録日 1997-06-06 公開日 1998-03-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Heterodimer Formation and Crystal Nucleation of Gramicidin D Biophys.J., 75, 1998
6S2S	Hydrogenated human myelin protein P2 at 0.86-A resolution 分子名称: CITRIC ACID, Myelin P2 protein, PALMITIC ACID, ... 著者 Laulumaa, S, Kursula, P. 登録日 2019-06-21 公開日 2019-08-28 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Sub-Atomic Resolution Crystal Structures Reveal Conserved Geometric Outliers at Functional Sites. Molecules, 24, 2019
7QSH	23S ribosomal RNA Sarcin Ricin Loop 27-nt fragment containing a Xanthosine residue at position 2648 分子名称: 23S ribosomal RNA Sarcin Ricin Loop 27-nucleotide fragment, 9-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-2-oxidanyl-1~{H}-purin-6-one, GLYCEROL, ... 著者 Ennifar, E, Micura, R. 登録日 2022-01-13 公開日 2023-01-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA. Nucleic Acids Res., 50, 2022
5AVD	The 0.86 angstrom structure of elastase crystallized in high-strength agarose hydrogel 分子名称: Chymotrypsin-like elastase family member 1, SULFATE ION 著者 Sugiyama, S, Shimizu, N, Maruyama, M, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H. 登録日 2015-06-15 公開日 2015-07-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Growth of protein crystals in hydrogels prevents osmotic shock J.Am.Chem.Soc., 134, 2012
3WDN	High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method 分子名称: GLYCEROL, Glycine cleavage system H protein, mitochondrial 著者 Higashiura, A, Nakagawa, A. 登録日 2013-06-19 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method J.SYNCHROTRON RADIAT., 20, 2013
2DDX	Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4 分子名称: GLYCEROL, MAGNESIUM ION, beta-1,3-xylanase 著者 Sakaguchi, K. 登録日 2006-02-06 公開日 2007-02-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Atomic resolution analysis of beta-1,3-xylanase catalytic module from Vibrio sp. AX-4 To be Published

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