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8XGV
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BU of 8xgv by Molmil
Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction (PPI) Inhibitors
Descriptor: (2~{R},3~{S})-3-[[(2~{S})-2-[4-[(3-ethoxypyridin-2-yl)methyl]phenyl]-2-fluoranyl-ethanoyl]amino]-2-methyl-3-(4-methylphenyl)propanoic acid, ACETATE ION, Kelch-like ECH-associated protein 1, ...
Authors:Otake, K, Hara, Y, Ubukata, M, Inoue, M, Nagahashi, N, Motoda, D, Ogawa, N, Hantani, Y, Hantani, R, Adachi, T, Nomura, A, Yamaguchi, K, Maekawa, M, Mamada, H, Motomura, T, Sato, M, Harada, K.
Deposit date:2023-12-15
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction Inhibitors.
J.Med.Chem., 67, 2024
8XGR
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BU of 8xgr by Molmil
ETB-eGt complex bound to endothelin-1
Descriptor: Camelid antibody VHH fragment, Endothelin receptor type B, Endothelin-1, ...
Authors:Oshima, H.S, Sano, F.K, Akasaka, H, Iwama, A, Shihoya, W, Nureki, O.
Deposit date:2023-12-15
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Optimizing cryo-EM structural analysis of G i -coupling receptors via engineered G t and Nb35 application.
Biochem.Biophys.Res.Commun., 693, 2024
8XGK
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BU of 8xgk by Molmil
Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction Ihhibitors
Descriptor: (2~{R},3~{S})-3-[[(2~{S})-2-(4-chlorophenyl)-2-fluoranyl-ethanoyl]amino]-3-[3-(2-cyano-2-methyl-propoxy)-4-methyl-phenyl]-2-methyl-propanoic acid, ACETATE ION, Kelch-like ECH-associated protein 1, ...
Authors:Otake, K, Hara, Y, Ubukata, M, Inoue, M, Nagahashi, N, Motoda, D, Ogawa, N, Hantani, Y, Hantani, R, Adachi, T, Nomura, A, Yamaguchi, K, Maekawa, M, Mamada, H, Motomura, T, Sato, M, Harada, K.
Deposit date:2023-12-15
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction Inhibitors.
J.Med.Chem., 67, 2024
8XGC
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BU of 8xgc by Molmil
Structure of yeast replisome associated with FACT and histone hexamer, Composite map
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, Chromosome segregation in meiosis protein 3, ...
Authors:Li, N, Gao, Y, Yu, D, Gao, N, Zhai, Y.
Deposit date:2023-12-15
Release date:2024-02-14
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Parental histone transfer caught at the replication fork.
Nature, 627, 2024
8XFY
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BU of 8xfy by Molmil
The Crystal Structure of RSK2 from Biortus.
Descriptor: 2,6-bis(fluoranyl)-4-[4-(4-morpholin-4-ylphenyl)pyridin-3-yl]phenol, Ribosomal protein S6 kinase alpha-3
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Pan, W.
Deposit date:2023-12-14
Release date:2024-03-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of RSK2 from Biortus.
To Be Published
8XFR
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BU of 8xfr by Molmil
Structure of the alginate epimerase/lyase complexed with tetra-mannuronic acid
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Fujiwara, T.
Deposit date:2023-12-14
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8XFQ
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BU of 8xfq by Molmil
Structure of the alginate epimerase/lyase complexed with penta-mannuronic acid
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
Authors:Fujiwara, T.
Deposit date:2023-12-14
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8XFM
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BU of 8xfm by Molmil
The Crystal Structure of MNK2 from Biortus.
Descriptor: 1,2-ETHANEDIOL, 5-(3-azanyl-1~{H}-indazol-6-yl)-1-[(3-chlorophenyl)methyl]pyridin-2-one, MAP kinase-interacting serine/threonine-protein kinase 2, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J.
Deposit date:2023-12-14
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of MNK2 from Biortus.
To Be Published
8XFL
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BU of 8xfl by Molmil
The Crystal Structure of MARK4 from Biortus.
Descriptor: MAP/microtubule affinity-regulating kinase 4
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J.
Deposit date:2023-12-14
Release date:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Crystal Structure of MARK4 from Biortus.
To Be Published
8XFD
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BU of 8xfd by Molmil
Crystal structure of pyruvate kinase tetramer in complex with allosteric activator, Mitapivat (MTPV, AG-348)
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Isoform L-type of Pyruvate kinase PKLR, MAGNESIUM ION, ...
Authors:Sun, R, Achour, A.
Deposit date:2023-12-13
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High Resolution Crystal Structure of the Pyruvate Kinase Tetramer in Complex with the Allosteric Activator Mitapivat/AG-348
Crystals, 2024
8XF3
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BU of 8xf3 by Molmil
Crystal structure of the reassembled C-phycocyanin octamer from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHOSPHATE ION, ...
Authors:Nguyen, H.K, Teramoto, T, Kakuta, Y, Yoon, K.S.
Deposit date:2023-12-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Disassembly and reassembly of the non-conventional thermophilic C-phycocyanin.
J.Biosci.Bioeng., 137, 2024
8XF2
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BU of 8xf2 by Molmil
Crystal structure of the reassembled C-phycocyanin hexamer from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHOSPHATE ION, ...
Authors:Nguyen, H.K, Teramoto, T, Kakuta, Y, Yoon, K.S.
Deposit date:2023-12-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Disassembly and reassembly of the non-conventional thermophilic C-phycocyanin.
J.Biosci.Bioeng., 137, 2024
8XF1
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BU of 8xf1 by Molmil
Crystal structure of the dissociated C-phycocyanin beta-chain from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin beta chain, PHYCOCYANOBILIN
Authors:Nguyen, H.K, Teramoto, T, Kakuta, Y, Yoon, K.S.
Deposit date:2023-12-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Disassembly and reassembly of the non-conventional thermophilic C-phycocyanin.
J.Biosci.Bioeng., 137, 2024
8XF0
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BU of 8xf0 by Molmil
Crystal structure of the dissociated C-phycocyanin alpha-chain from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin alpha chain, MAGNESIUM ION, PHYCOCYANOBILIN
Authors:Nguyen, H.K, Teramoto, T, Kakuta, Y, Yoon, K.S.
Deposit date:2023-12-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Disassembly and reassembly of the non-conventional thermophilic C-phycocyanin.
J.Biosci.Bioeng., 137, 2024
8XEY
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BU of 8xey by Molmil
The Crystal Structure of C-terminal kinase domain of RSK2 from Biortus
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ribosomal protein S6 kinase alpha-3
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Zhang, B.
Deposit date:2023-12-13
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Crystal Structure of C-terminal kinase domain of RSK2 from Biortus
To Be Published
8XEQ
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BU of 8xeq by Molmil
Solution NMR structure of DNA sequence d(CGATCG)2
Descriptor: DNA (5'-D(*CP*AP*CP*GP*TP*GP*)-3')
Authors:Nair, M.S, Kumar, S.
Deposit date:2023-12-12
Release date:2024-01-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of DNA sequence d(CGATCG)2
To Be Published
8XEP
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BU of 8xep by Molmil
Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin
Descriptor: SULFATE ION, Type IV effector MavL, Ubiquitin
Authors:Tan, J.X, Wang, X.F, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-12-12
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin
To Be Published
8XEJ
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BU of 8xej by Molmil
Cryo-EM structure of human XKR8-basigin complex in lipid nanodisc
Descriptor: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Fab heavy chain, Fab light chain, ...
Authors:Sakuragi, T.S, Kanai, R.K, Kikkawa, M.K, Toyoshima, C.T, Nagata, S.N.
Deposit date:2023-12-12
Release date:2024-02-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:The role of the C-terminal tail region as a plug to regulate XKR8 lipid scramblase.
J.Biol.Chem., 300, 2024
8XEG
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BU of 8xeg by Molmil
Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom.
Descriptor: Capsid protein VP1
Authors:Zhang, R, Liu, Y, Lou, Z.
Deposit date:2023-12-12
Release date:2024-01-24
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (1.76 Å)
Cite:Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
8XEA
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BU of 8xea by Molmil
XBB.1.5 spike protein in complex with BD55-1205
Descriptor: BD55-1205 heavy chain, BD55-1205 light chain, Spike glycoprotein
Authors:Feng, L.L.
Deposit date:2023-12-11
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:XBB.1.5 spike protein in complex with BD55-1205
To Be Published
8XE9
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BU of 8xe9 by Molmil
XBB.1.5 RBD in complex with BD55-1205
Descriptor: BD55-1205 heavy chain, BD55-1205 light chain, Spike protein S2'
Authors:Feng, L.L.
Deposit date:2023-12-11
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:XBB.1.5 RBD in complex with BD55-1205
To Be Published
8XE7
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BU of 8xe7 by Molmil
Crystal structure of human Sirt2 without Sirt2-specific insertion
Descriptor: NAD-dependent protein deacetylase sirtuin-2, ZINC ION
Authors:Konuma, T, Akashi, S.
Deposit date:2023-12-11
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Biophysical insights into the dimer formation of human Sirtuin 2.
Protein Sci., 33, 2024
8XD6
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BU of 8xd6 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the steady stage of reaction
Descriptor: 2-OXOGLUTARIC ACID, AMMONIUM ION, Glutamate dehydrogenase, ...
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase
To Be Published
8XD5
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BU of 8xd5 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the steady stage of reaction
Descriptor: GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase
To Be Published
8XD4
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BU of 8xd4 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Descriptor: GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase
To Be Published

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PDB entries from 2024-05-22

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