Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8D4D
DownloadVisualize
BU of 8d4d by Molmil
gamma-Arf1 mediated dimeric assembly of AP-1, Arf1, Nef complex within lattice on MHC-I lipopeptide incorporated narrow membrane tubes
Descriptor: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
Authors:Hooy, R.M, Hurley, J.H.
Deposit date:2022-06-01
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
2NO2
DownloadVisualize
BU of 2no2 by Molmil
Crystal structure of the DLLRKN-containing coiled-coil domain of Huntingtin-interacting protein 1
Descriptor: Huntingtin-interacting protein 1
Authors:Ybe, J.A, Mishra, S, Helms, S, Nix, J.
Deposit date:2006-10-24
Release date:2007-10-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure at 2.8 A of the DLLRKN-containing coiled-coil domain of huntingtin-interacting protein 1 (HIP1) reveals a surface suitable for clathrin light chain binding
J.Mol.Biol., 367, 2007
7BN2
DownloadVisualize
BU of 7bn2 by Molmil
Clathrin heavy chain N-terminal domain bound to Non structured protein 3 from Eastern Equine Encephalitis Virus
Descriptor: Clathrin heavy chain 1, Non structured protein 3 from Eastern Equine Encephalitis Virus, PHOSPHATE ION, ...
Authors:Badgujar, D.C, Dobritzsch, D.
Deposit date:2021-01-21
Release date:2022-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.965 Å)
Cite:Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
Nat Commun, 14, 2023
7BN1
DownloadVisualize
BU of 7bn1 by Molmil
Clathrin heavy chain N-terminal domain complexed with peptide from Protein mu-NS of Reovirus type 1
Descriptor: Clathrin heavy chain 1, Protein mu-NS from Reovirus type 1, TETRAETHYLENE GLYCOL
Authors:Badgujar, D.C, Dobritzsch, D.
Deposit date:2021-01-21
Release date:2022-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
Nat Commun, 14, 2023
2IV8
DownloadVisualize
BU of 2iv8 by Molmil
beta appendage in complex with b-arrestin peptide
Descriptor: AP-2 COMPLEX SUBUNIT BETA-1, BETA-ARRESTIN-1
Authors:Ford, M.G.J, Schmid, E.M, McMahon, H.T.
Deposit date:2006-06-08
Release date:2007-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Role of the Ap2 Beta-Appendage Hub in Recruiting Partners for Clathrin-Coated Vesicle Assembly.
Plos Biol., 4, 2006
2IV9
DownloadVisualize
BU of 2iv9 by Molmil
B2-appendage from AP2 in complex with Eps15 peptide
Descriptor: AP-2 COMPLEX SUBUNIT BETA-2, EPIDERMAL GROWTH FACTOR RECEPTOR SUBSTRATE 15 ISOFORM B, SULFATE ION
Authors:Ford, M.G.J, Schmid, E.M, McMahon, H.T.
Deposit date:2006-06-08
Release date:2007-03-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of the Ap2 Beta-Appendage Hub in Recruiting Partners for Clathrin-Coated Vesicle Assembly
Plos Biol., 4, 2006
7B2L
DownloadVisualize
BU of 7b2l by Molmil
Structure of the endocytic adaptor complex AENTH
Descriptor: ANTH domain of Sla2, ENTH domain of epsin Ent1, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Klebl, D.P, Lizarrondo, J, Sobott, F, Garcia-Alai, M, Muench, S.P.
Deposit date:2020-11-27
Release date:2021-05-05
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the endocytic adaptor complex reveals the basis for efficient membrane anchoring during clathrin-mediated endocytosis.
Nat Commun, 12, 2021
2VX8
DownloadVisualize
BU of 2vx8 by Molmil
Vamp7 longin domain Hrb peptide complex
Descriptor: CHLORIDE ION, NUCLEOPORIN-LIKE PROTEIN RIP, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7
Authors:Evans, P.R, Owen, D.J, Luzio, J.P.
Deposit date:2008-07-01
Release date:2008-09-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular Basis for the Sorting of the Snare Vamp7 Into Endocytic Clathrin-Coated Vesicles by the Arfgap Hrb.
Cell(Cambridge,Mass.), 134, 2008
3MKR
DownloadVisualize
BU of 3mkr by Molmil
Crystal structure of yeast alpha/epsilon-COP subcomplex of the COPI vesicular coat
Descriptor: Coatomer subunit alpha, Coatomer subunit epsilon
Authors:Lee, C, Goldberg, J.
Deposit date:2010-04-15
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats.
Cell(Cambridge,Mass.), 142, 2010
3MKQ
DownloadVisualize
BU of 3mkq by Molmil
Crystal structure of yeast alpha/betaprime-COP subcomplex of the COPI vesicular coat
Descriptor: Coatomer beta'-subunit, Coatomer subunit alpha
Authors:Lee, C, Goldberg, J.
Deposit date:2010-04-15
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of coatomer cage proteins and the relationship among COPI, COPII, and clathrin vesicle coats.
Cell(Cambridge,Mass.), 142, 2010
2QYW
DownloadVisualize
BU of 2qyw by Molmil
Crystal structure of mouse vti1b Habc domain
Descriptor: Vesicle transport through interaction with t-SNAREs 1B homolog
Authors:Miller, S.E, Collins, B.M, McCoy, A.J, Robinson, M.S, Owen, D.J.
Deposit date:2007-08-15
Release date:2007-11-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A SNARE-adaptor interaction is a new mode of cargo recognition in clathrin-coated vesicles.
Nature, 450, 2007
3N0A
DownloadVisualize
BU of 3n0a by Molmil
Crystal structure of auxilin (40-400)
Descriptor: CALCIUM ION, CHLORIDE ION, Tyrosine-protein phosphatase auxilin
Authors:Harrison, S.C, Guan, R, Dai, H, Kirchhausen, T.
Deposit date:2010-05-13
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the PTEN-like Region of Auxilin, a Detector of Clathrin-Coated Vesicle Budding.
Structure, 18, 2010
6GBU
DownloadVisualize
BU of 6gbu by Molmil
Crystal structure of the second SH3 domain of FCHSD2 (SH3-2) in complex with the fourth SH3 domain of ITSN1 (SH3d)
Descriptor: F-BAR and double SH3 domains protein 2, Intersectin-1
Authors:Almeida-Souza, L, Frank, R, Garcia-Nafria, J, Colussi, A, Gunawardana, N, Johnson, C.M, Yu, M, Howard, G, Andrews, B, Vallis, Y, McMahon, H.T.
Deposit date:2018-04-16
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:A Flat BAR Protein Promotes Actin Polymerization at the Base of Clathrin-Coated Pits.
Cell, 174, 2018
2BP5
DownloadVisualize
BU of 2bp5 by Molmil
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH NON-CANONICAL INTERNALIZATION PEPTIDE VEDYEQGLSG
Descriptor: CLATHRIN COAT ASSEMBLY PROTEIN AP50, P2X PURINOCEPTOR 4
Authors:Royle, S.J, Evans, P.R, Owen, D.J, Murrell-Lagnado, R.D.
Deposit date:2005-04-18
Release date:2005-07-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Non-Canonical Yxxg-Phi Endocytic Motifs: Recognition by Ap2 and Preferential Utilization in P2X4 Receptors.
J.Cell.Sci, 118, 2005
7OG1
DownloadVisualize
BU of 7og1 by Molmil
AP2 clathrin adaptor core in complex with cargo peptide and FCHO2
Descriptor: AP-2 complex subunit alpha-2, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
Authors:Zaccai, N.R, Kelly, B.T, Evans, P.R, Owen, D.J.
Deposit date:2021-05-05
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:FCHO controls AP2's initiating role in endocytosis through a PtdIns(4,5)P 2 -dependent switch.
Sci Adv, 8, 2022
7OFP
DownloadVisualize
BU of 7ofp by Molmil
Apo Structure of Mu2 Adaptin Subunit (Ap50) Of AP2 Clathrin Adaptor
Descriptor: AP-2 complex subunit mu, CITRIC ACID, GLYCEROL
Authors:Zaccai, N.R, Kelly, B.T, Evans, P.R, Owen, D.J.
Deposit date:2021-05-05
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:FCHO controls AP2's initiating role in endocytosis through a PtdIns(4,5)P 2 -dependent switch.
Sci Adv, 8, 2022
1E42
DownloadVisualize
BU of 1e42 by Molmil
Beta2-adaptin appendage domain, from clathrin adaptor AP2
Descriptor: AP-2 COMPLEX SUBUNIT BETA, CHLORIDE ION, DITHIANE DIOL, ...
Authors:Owen, D.J, Evans, P.R, McMahon, H.T.
Deposit date:2000-06-27
Release date:2000-08-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure and Function of the Beta2-Adaptin Appendage Domain
Embo J., 19, 2000
6OWT
DownloadVisualize
BU of 6owt by Molmil
Structure of SIVsmm Nef and SMM tetherin bound to the clathrin adaptor AP-2 complex
Descriptor: AP-2 complex subunit alpha, AP-2 complex subunit beta, AP-2 complex subunit sigma, ...
Authors:Buffalo, C.Z, Ren, X, Hurley, J.H.
Deposit date:2019-05-10
Release date:2019-09-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural Basis for Tetherin Antagonism as a Barrier to Zoonotic Lentiviral Transmission.
Cell Host Microbe, 26, 2019
6URI
DownloadVisualize
BU of 6uri by Molmil
HIV-1 Nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex
Descriptor: AP-2 complex subunit alpha, AP-2 complex subunit beta, AP-2 complex subunit mu, ...
Authors:Jia, X, Kwon, Y.
Deposit date:2019-10-23
Release date:2020-07-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of CD4 downregulation by HIV-1 Nef.
Nat.Struct.Mol.Biol., 27, 2020
5WRM
DownloadVisualize
BU of 5wrm by Molmil
Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y658 peptide
Descriptor: AP-2 complex subunit mu, Insulin receptor substrate 1
Authors:Yoneyama, Y, Niwa, H, Umehara, T, Yokoyama, S, Hakuno, F, Takahashi, S.
Deposit date:2016-12-02
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:IRS-1 acts as an endocytic regulator of IGF-I receptor to facilitate sustained IGF signaling
Elife, 7, 2018
2JKR
DownloadVisualize
BU of 2jkr by Molmil
AP2 CLATHRIN ADAPTOR CORE with Dileucine peptide RM(phosphoS)QIKRLLSE
Descriptor: AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2 COMPLEX SUBUNIT BETA-1, AP-2 COMPLEX SUBUNIT MU-1, ...
Authors:Owen, D.J, McCoy, A.J, Kelly, B.T, Evans, P.R.
Deposit date:2008-08-29
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:A Structural Explanation for the Binding of Endocytic Dileucine Motifs by the Ap2 Complex.
Nature, 456, 2008
2JKT
DownloadVisualize
BU of 2jkt by Molmil
AP2 CLATHRIN ADAPTOR CORE with CD4 Dileucine peptide RM(phosphoS) EIKRLLSE Q to E mutant
Descriptor: AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2 COMPLEX SUBUNIT BETA-1, AP-2 COMPLEX SUBUNIT MU-1, ...
Authors:Owen, D.J, McCoy, A.J, Kelly, B.T, Evans, P.R.
Deposit date:2008-08-29
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A Structural Explanation for the Binding of Endocytic Dileucine Motifs by the Ap2 Complex.
Nature, 456, 2008
2VGL
DownloadVisualize
BU of 2vgl by Molmil
AP2 CLATHRIN ADAPTOR CORE
Descriptor: ADAPTOR PROTEIN COMPLEX AP-2, ALPHA 2 SUBUNIT, AP-2 COMPLEX SUBUNIT BETA-1, ...
Authors:Owen, D.J, Collins, B.M, McCoy, A.J, Evans, P.R.
Deposit date:2007-11-14
Release date:2007-12-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular Architecture and Functional Model of the Endocytic Ap2 Complex
Cell(Cambridge,Mass.), 109, 2002
5WRL
DownloadVisualize
BU of 5wrl by Molmil
Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y628 peptide
Descriptor: AP-2 complex subunit mu, Insulin receptor substrate 1
Authors:Yoneyama, Y, Niwa, H, Umehara, T, Yokoyama, S, Hakuno, F, Takahashi, S.
Deposit date:2016-12-02
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.095 Å)
Cite:IRS-1 acts as an endocytic regulator of IGF-I receptor to facilitate sustained IGF signaling
Elife, 7, 2018
5WRK
DownloadVisualize
BU of 5wrk by Molmil
Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y608 peptide
Descriptor: AP-2 complex subunit mu, Insulin receptor substrate 1, NICKEL (II) ION
Authors:Yoneyama, Y, Niwa, H, Umehara, T, Yokoyama, S, Hakuno, F, Takahashi, S.
Deposit date:2016-12-02
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:IRS-1 acts as an endocytic regulator of IGF-I receptor to facilitate sustained IGF signaling
Elife, 7, 2018

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon