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6JZ5
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BU of 6jz5 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid
Descriptor: Beta-glucuronidase, beta-D-glucopyranuronic acid
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
Descriptor: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
5Z18
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BU of 5z18 by Molmil
The crystal structure of Ruminococcus gnavus beta-glucuronidase
Descriptor: Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z1B
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BU of 5z1b by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-O-glucuronide
Descriptor: 3-HYDROXY-2H-CHROMEN-2-ONE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
6QUB
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BU of 6qub by Molmil
Truncated beta-galactosidase III from Bifidobacterium bifidum in complex with galactose
Descriptor: Beta-galactosidase, CALCIUM ION, beta-D-galactopyranose
Authors:Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
Deposit date:2019-02-27
Release date:2020-03-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6QUC
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BU of 6quc by Molmil
Truncated beta-galactosidase III from Bifidobacterium bifidum
Descriptor: Beta-galactosidase, CALCIUM ION, IMIDAZOLE
Authors:Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
Deposit date:2019-02-27
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6TSH
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BU of 6tsh by Molmil
Beta-galactosidase in complex with deoxygalacto-nojirimycin
Descriptor: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol, Beta-galactosidase, MAGNESIUM ION
Authors:Saur, M, Hartshorn, M.J, Dong, J, Reeks, J, Bunkoczi, G, Jhoti, H, Williams, P.A.
Deposit date:2019-12-20
Release date:2020-01-08
Last modified:2020-03-25
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Fragment-based drug discovery using cryo-EM.
Drug Discov Today, 25, 2020
6U7J
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BU of 6u7j by Molmil
Uncultured Clostridium sp. Beta-glucuronidase
Descriptor: Beta-glucuronidase, CALCIUM ION
Authors:Ervin, S.M, Redinbo, M.R.
Deposit date:2019-09-03
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6S6Z
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BU of 6s6z by Molmil
Structure of beta-Galactosidase from Thermotoga maritima
Descriptor: Beta-galactosidase, MAGNESIUM ION
Authors:Miguez-Amil, S, Jimenez-Ortega, E, Ramirez Escudero, M, Sanz-Aparicio, J, Fernandez-Leiro, R.
Deposit date:2019-07-04
Release date:2020-03-18
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
6U7I
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BU of 6u7i by Molmil
Faecalibacterium prausnitzii Beta-glucuronidase
Descriptor: Beta-glucuronidase
Authors:Ervin, S.M, Redinbo, M.R.
Deposit date:2019-09-03
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
5T98
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BU of 5t98 by Molmil
Crystal structure of BuGH2Awt
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glycoside Hydrolase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
5T9G
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BU of 5t9g by Molmil
Crystal structure of BuGH2Cwt in complex with Galactoisofagomine
Descriptor: 1,2-ETHANEDIOL, D-galacto-isofagomine, Glycoside Hydrolase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
6B6L
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BU of 6b6l by Molmil
The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Glycosyl hydrolase family 2, ...
Authors:Tan, K, Joachimiak, G, Nocek, B, Enddres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2017-10-02
Release date:2017-10-11
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838
To Be Published
5T9A
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BU of 5t9a by Molmil
Crystal structure of BuGH2Cwt
Descriptor: 1,2-ETHANEDIOL, Glycoside Hydrolase, SULFATE ION
Authors:Pluvinage, B, Boraston, A.B, Abbott, W.D.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
6SD0
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BU of 6sd0 by Molmil
Structure of beta-galactosidase from Thermotoga maritima.
Descriptor: Beta-galactosidase, MAGNESIUM ION
Authors:Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2019-07-26
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
6TTE
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BU of 6tte by Molmil
Beta-galactosidase in complex with PETG
Descriptor: 2-phenylethyl 1-thio-beta-D-galactopyranoside, Beta-galactosidase, MAGNESIUM ION
Authors:Saur, M, Hartshorn, M.J, Dong, J, Reeks, J, Bunkoczi, G, Jhoti, H, Williams, P.A.
Deposit date:2019-12-27
Release date:2020-01-15
Last modified:2020-03-25
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Fragment-based drug discovery using cryo-EM.
Drug Discov Today, 25, 2020
6BJW
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BU of 6bjw by Molmil
Eubacterium eligens Beta-glucuronidase
Descriptor: Glycoside Hydrolase Family 2 candidate b-glucuronidase
Authors:Pellock, S.J, Walton, W.G, Redinbo, M.R.
Deposit date:2017-11-07
Release date:2018-07-25
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Gut Microbial beta-Glucuronidase Inhibition via Catalytic Cycle Interception.
ACS Cent Sci, 4, 2018
6BO6
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BU of 6bo6 by Molmil
Eubacterium eligens beta-glucuronidase bound to UNC4917 glucuronic acid conjugate
Descriptor: 4-(4-beta-D-glucopyranuronosylpiperazin-1-yl)-2,7-bis(methylamino)pyrido[3',2':4,5]thieno[3,2-d]pyrimidine, Glycoside Hydrolase Family 2 candidate b-glucuronidase
Authors:Pellock, S.J, Walton, W.G, Redinbo, M.R.
Deposit date:2017-11-18
Release date:2018-07-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Gut Microbial beta-Glucuronidase Inhibition via Catalytic Cycle Interception.
ACS Cent Sci, 4, 2018
6BJQ
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BU of 6bjq by Molmil
Eubacterium eligens beta-glucuronidase bound to glucuronic acid
Descriptor: Glycoside Hydrolase Family 2 candidate b-glucuronidase, beta-D-glucopyranuronic acid
Authors:Pellock, S.J, Walton, W.G, Redinbo, M.R.
Deposit date:2017-11-06
Release date:2018-07-25
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Gut Microbial beta-Glucuronidase Inhibition via Catalytic Cycle Interception.
ACS Cent Sci, 4, 2018
5T99
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BU of 5t99 by Molmil
Crystal structure of BuGH2Awt in complex with Galactoisofagomine
Descriptor: 1,2-ETHANEDIOL, D-galacto-isofagomine, Glycoside Hydrolase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-09-09
Release date:2017-09-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Nat Commun, 9, 2018
6QUD
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BU of 6qud by Molmil
2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum
Descriptor: 2-deoxy-alpha-D-galactopyranose, Beta-galactosidase, CALCIUM ION
Authors:Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
Deposit date:2019-02-27
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
8BK7
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BU of 8bk7 by Molmil
Cryo-EM structure of beta-galactosidase at 3.3 A resolution plunged 5 ms after mixing with apoferritin
Descriptor: Beta-galactosidase
Authors:Torino, S, Dhurandhar, M, Efremov, R.
Deposit date:2022-11-08
Release date:2023-08-09
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Time-resolved cryo-EM using a combination of droplet microfluidics with on-demand jetting.
Nat.Methods, 20, 2023
8BKG
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BU of 8bkg by Molmil
Cryo-EM structure of beta-galactosidase at 3.2 A resolution plunged 35 ms after mixing with apoferritin
Descriptor: Beta-galactosidase
Authors:Torino, S, Dhurandhar, M, Efremov, R.
Deposit date:2022-11-09
Release date:2023-08-09
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Time-resolved cryo-EM using a combination of droplet microfluidics with on-demand jetting.
Nat.Methods, 20, 2023
8BK8
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BU of 8bk8 by Molmil
Cryo-EM structure of beta-galactosidase at 2.9 A resolution plunged 205 ms after mixing with apoferritin
Descriptor: Beta-galactosidase
Authors:Torino, S, Dhurandhar, M, Efremov, R.
Deposit date:2022-11-08
Release date:2023-08-09
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Time-resolved cryo-EM using a combination of droplet microfluidics with on-demand jetting.
Nat.Methods, 20, 2023
8DHL
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BU of 8dhl by Molmil
Tannerella forsythia beta-glucuronidase (L2)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 2, ...
Authors:Lietzan, A.D, Redinbo, M.R.
Deposit date:2022-06-27
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Microbial beta-glucuronidases drive human periodontal disease etiology.
Sci Adv, 9, 2023

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