PDB: 256 件ウェブページステータス検索Chemie searchBIRD

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6H2R	Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant 分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL, ... 著者 Crennell, S.J, Danson, M.J, Royer, S. 登録日 2018-07-16 公開日 2019-07-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.574 Å) 主引用文献 Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/D181Q/A198L variant To Be Published
6H4E	Proteus mirabilis N-acetylneuraminate lyase 分子名称: Putative N-acetylneuraminate lyase, SULFATE ION 著者 North, R.A, Garcia-Bonete, M.J, Goyal, P, Katona, G, Dobson, R.C.J, Friemann, R. 登録日 2018-07-21 公開日 2019-06-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.561 Å) 主引用文献 The structure of Proteus mirabilis N-acetylneuraminate lyase reveals an intermolecular disulphide bond To Be Published
6H7S	Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant in complex with L-2-keto-3deoxy-gluconate 分子名称: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, L-2-keto-3deoxy-gluconate 著者 Crennell, S.J, Danson, M.J, Royer, S. 登録日 2018-07-31 公開日 2019-08-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.202 Å) 主引用文献 Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant To Be Published
6H7R	Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant 分子名称: 1,2-ETHANEDIOL, 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase, GLYCEROL 著者 Crennell, S.J, Danson, M.J, Royer, S. 登録日 2018-07-31 公開日 2019-08-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase T157V/A198L variant To Be Published
6MQH	Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-10-09 公開日 2018-10-31 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) from Burkholderia mallei To be Published
6NVA	Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161. 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, SODIUM ION 著者 Thomas, L.M, Chooback, L. 登録日 2019-02-04 公開日 2019-02-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Crystal structure of Escherichia coli dihydrodipicolinate synthase and propionate covalently bound to K161. To Be Published
6RAB	Ruminococcus gnavus sialic acid aldolase Wild Type 分子名称: Putative N-acetylneuraminate lyase 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-05 公開日 2019-09-25 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6RB7	Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, DI(HYDROXYETHYL)ETHER, ... 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-09 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6RD1	Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant in complex with sialic acid 分子名称: 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, Putative N-acetylneuraminate lyase 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-12 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6P90	Crystal structure of PaDHDPS2-H56Q mutant 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, GLYCEROL 著者 Impey, R.E, Panjikar, S, Hall, C.J, Bock, L.J, Sutton, J.M, Perugini, M.A, Soares da Costa, T.P. 登録日 2019-06-08 公開日 2019-08-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Identification of two dihydrodipicolinate synthase isoforms from Pseudomonas aeruginosa that differ in allosteric regulation. Febs J., 287, 2020
6U01	Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84D mutant with pyruvate bound in the active site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... 著者 Saran, S, Majdi Yazdi, M, Lehnert, L, Palmer, D.R.J, Sanders, D.A.R. 登録日 2019-08-13 公開日 2019-12-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase. J.Struct.Biol., 209, 2020
6TZU	Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84A mutant with pyruvate bound in the active site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... 著者 Saran, S, Majdi Yazdi, M, Lehnert, C, Palmer, D.R.J, Sanders, D.A.R. 登録日 2019-08-13 公開日 2019-12-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase. J.Struct.Biol., 209, 2020
6UE0	Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION 著者 Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P. 登録日 2019-09-20 公開日 2020-02-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens. Febs Lett., 594, 2020
6T3T	Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, SULFATE ION 著者 Schmitz, R, Dietl, A, Mueller, M, Berben, T, Op den Camp, H, Barends, T. 登録日 2019-10-11 公開日 2020-05-06 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of the 4-hydroxy-tetrahydrodipicolinate synthase from the thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV and the phylogeny of the aminotransferase pathway. Acta Crystallogr.,Sect.F, 76, 2020
6VVI	Arabidopsis thaliana dihydrodipicolinate synthase isoform 1 (DHDPS1) 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, GLYCEROL, ... 著者 Lee, M, Hall, C.J. 登録日 2020-02-18 公開日 2021-02-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.145 Å) 主引用文献 Differential lysine-mediated allosteric regulation of plant dihydrodipicolinate synthase isoforms. Febs J., 288, 2021
6VVH	Arabidopsis thaliana dihydrodipicolinate synthase isoform 1 (DHDPS1) in complex with lysine 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic, ... 著者 Lee, M, Hall, C.J. 登録日 2020-02-18 公開日 2021-02-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.792 Å) 主引用文献 Differential lysine-mediated allosteric regulation of plant dihydrodipicolinate synthase isoforms. Febs J., 288, 2021
7C0D	Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (Hydroxypyruvate-bound form) 分子名称: L-2-keto-3-deoxyarabonate dehydratase 著者 Watanabe, Y, Watanabe, S. 登録日 2020-05-01 公開日 2020-08-05 最終更新日 2020-09-02 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily. Biochemistry, 59, 2020
7C0E	Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (2-oxobutyrate-bound form) 分子名称: L-2-keto-3-deoxyarabonate dehydratase 著者 Watanabe, Y, Ono, A, Watanabe, S. 登録日 2020-05-01 公開日 2020-08-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.204 Å) 主引用文献 Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily. Biochemistry, 59, 2020
7C0C	Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (apo form) 分子名称: L-2-keto-3-deoxyarabonate dehydratase 著者 Watanabe, Y, Nobuchi, R, Watanabe, S. 登録日 2020-05-01 公開日 2020-08-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily. Biochemistry, 59, 2020
6XGS	Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CITRIC ACID, PHOSPHATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-06-18 公開日 2020-07-08 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330 to be published
7JZ8	Dihydrodipicolinate synthase mutant S48F with lysine in the allosteric site 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, POTASSIUM ION 著者 Board, A.J, Dobson, R.C.J. 登録日 2020-09-01 公開日 2021-10-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Mapping the unchartered waters of dihydrodipicolinate synthase: a novel mechanism of allosteric inhibition. To Be Published
7JZA	Dihydrodipicolinate synthase S48F mutant with lysine in the allosteric site, and pyruvate and succinic semi-aldehyde in the catalytic site 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, LYSINE, ... 著者 Board, A.J, Dobson, R.C.J. 登録日 2020-09-01 公開日 2021-09-22 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Mapping the uncharted water channel of DHDPS To Be Published
7JZB	Dihydrodipicolinate synthase S48W with lysine in the allosteric site, and pyruvate and succinic semi-aldehyde 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, LYSINE, POTASSIUM ION 著者 Board, A.J, Dobson, R.C.J. 登録日 2020-09-01 公開日 2021-09-22 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Mapping the uncharted water channel of DHDPS To Be Published
7JZ9	Dihydrodipicolinate synthase S48F with pyruvate and succinic semi-aldehyde 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION 著者 Board, A.J, Dobson, R.C.J. 登録日 2020-09-01 公開日 2021-09-22 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Mapping the uncharted water channel of DHDPS To Be Published
7JZ7	Dihydrodipicolinate synthase mutant S48F 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, GLYCEROL, POTASSIUM ION 著者 Board, A.J, Dobson, R.C.J. 登録日 2020-09-01 公開日 2021-10-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Mapping the unchartered waters of dihydrodipicolinate synthase: a novel mechanism of allosteric inhibition. To Be Published

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