PDB: 87 件ウェブページステータス検索Chemie searchBIRD

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4ERH	The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 分子名称: GLYCEROL, Outer membrane protein A, SULFATE ION 著者 Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP) 登録日 2012-04-20 公開日 2012-05-02 最終更新日 2015-04-01 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 The crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S To be Published
6IKJ	Crystal structure of YfiB(F48S) 分子名称: GLYCEROL, SULFATE ION, YfiB 著者 Li, S, Zhang, Q, Bartlam, M. 登録日 2018-10-16 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1. Biochem. Biophys. Res. Commun., 506, 2018
6IKI	Crystal structure of YfiB(W55L) 分子名称: GLYCEROL, SULFATE ION, YfiB 著者 Li, S, Zhang, Q, Bartlam, M. 登録日 2018-10-16 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.204 Å) 主引用文献 Structural analysis of activating mutants of YfiB from Pseudomonas aeruginosa PAO1. Biochem. Biophys. Res. Commun., 506, 2018
5U1H	Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa 分子名称: (2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid, ACETATE ION, CHLORIDE ION, ... 著者 Watanabe, N, Stogios, P.J, Skarina, T, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2016-11-28 公開日 2017-01-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa To be published
4G4Y	Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii 分子名称: ALANINE, Outer membrane protein Omp38, SULFATE ION 著者 Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y. 登録日 2012-07-16 公開日 2013-07-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA To be Published
6JFW	Crystal structure of PA0833 periplasmic domain from Pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket 分子名称: PA0833-PD protein 著者 Lin, X, Ye, F, Lin, S, Yang, F.L, Chen, Z.M, Cao, Y, Chen, Z.J, Gu, J, Lu, G.W. 登録日 2019-02-12 公開日 2019-03-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.002 Å) 主引用文献 Crystal structure of PA0833 periplasmic domain from Pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket. Biochem. Biophys. Res. Commun., 511, 2019
4B5C	Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia pseudomallei 分子名称: ACETATE ION, PUTATIVE OMPA FAMILY LIPOPROTEIN 著者 Gourlay, L.J, Peri, C, Conchillo-Sole, O, Ferrer-Navarro, M, Gori, A, Longhi, R, Rinchai, D, Lertmemongkolchai, G, Lassaux, P, Daura, X, Colombo, G, Bolognesi, M. 登録日 2012-08-03 公開日 2013-08-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Exploiting the Burkholderia Pseudomallei Acute Phase Antigen Bpsl2765 for Structure-Based Epitope Discovery/Design in Structural Vaccinology. Chem.Biool., 20, 2013
4G88	Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii 分子名称: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein Omp38, S,R MESO-TARTARIC ACID 著者 Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y. 登録日 2012-07-22 公開日 2013-07-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA to be published
4G4Z	Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii 分子名称: D-ALANINE, Outer membrane protein Omp38, SULFATE ION 著者 Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y. 登録日 2012-07-16 公開日 2013-07-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA To be Published
5VES	The 2.4A crystal structure of OmpA domain of OmpA from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 分子名称: Outer membrane protein A, SULFATE ION 著者 Tan, K, Wu, R, Jedrzejczak, R, Adkins, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP) 登録日 2017-04-05 公開日 2017-04-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi. Protein Sci., 26, 2017
4B62	The structure of the cell wall anchor of the T6SS from Pseudomonas aeruginosa 分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, TSSL1 著者 Robb, C.S, Carlson, M, Nano, F.E, Boraston, A.B. 登録日 2012-08-08 公開日 2013-10-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal Structure of the Periplasmic Peptidoglycan Binding Anchor of a T6Ss from Pseudomonas Aeruginosa. To be Published
5WTP	Crystal structure of the C-terminal domain of outer membrane protein A (OmpA) from Capnocytophaga gingivalis 分子名称: OmpA family protein, SULFATE ION 著者 Dai, S, Tan, K, Ye, S, Zhang, R. 登録日 2016-12-13 公開日 2017-12-13 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure of thrombospondin type 3 repeats in bacterial outer membrane protein A reveals its intra-repeat disulfide bond-dependent calcium-binding capability. Cell Calcium, 66, 2017
3OON	The structure of an outer membrance protein from Borrelia burgdorferi B31 分子名称: Outer membrane protein (Tpn50), SULFATE ION 著者 Fan, Y, Bigelow, L, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2010-08-31 公開日 2010-09-22 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi. Protein Sci., 26, 2017
2ZVY	Structure of the periplasmic domain of MotB from Salmonella (crystal form II) 分子名称: Chemotaxis protein motB 著者 Kojima, S, Homma, M, Namba, K, Imada, K. 登録日 2008-11-26 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB Mol.Microbiol., 73, 2009
2ZVZ	Structure of the periplasmic domain of MotB from Salmonella (crystal form III) 分子名称: Chemotaxis protein motB 著者 Imada, K, Kojima, S, Namba, K, Homma, S. 登録日 2008-11-26 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB Mol.Microbiol., 73, 2009
2ZOV	Structure of the periplasmic domain of MotB from Salmonella (crystal form I) 分子名称: Chemotaxis protein motB 著者 Imada, K, Kojima, S, Namba, K, Homma, M. 登録日 2008-06-09 公開日 2009-06-09 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB Mol.Microbiol., 73, 2009
3CYQ	The crystal structure of the complex of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) with N-acetylmuramic acid 分子名称: Chemotaxis protein motB, N-acetyl-beta-muramic acid 著者 Roujeinikova, A. 登録日 2008-04-26 公開日 2008-07-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition. Proc.Natl.Acad.Sci.Usa, 2008
3CYP	The crystal structure of the C-terminal domain of Helicobacter pylori MotB (residues 125-256). 分子名称: Chemotaxis protein motB 著者 Roujeinikova, A. 登録日 2008-04-26 公開日 2008-07-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of the cell wall anchor domain of MotB, a stator component of the bacterial flagellar motor: implications for peptidoglycan recognition. Proc.Natl.Acad.Sci.Usa, 105, 2008
2K1S	Solution NMR structure of the folded C-terminal fragment of YiaD from Escherichia coli. Northeast Structural Genomics Consortium target ER553. 分子名称: Inner membrane lipoprotein yiaD 著者 Ramelot, T.A, Zhao, L, Hamilton, K, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Swapna, G, Acton, T.B, Rost, B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) 登録日 2008-03-14 公開日 2008-05-13 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of the folded C-terminal fragment of YiaD from Escherichia coli. Northeast Structural Genomics Consortium target ER553. To be Published
2KGW	Solution Structure of the carboxy-terminal domain of OmpATb, a pore forming protein from Mycobacterium tuberculosis 分子名称: Outer membrane protein A 著者 Yang, Y, Auguin, D, Delbecq, S, Hoh, F, Dumas, E, Molle, V, Saint, N. 登録日 2009-03-20 公開日 2010-03-02 最終更新日 2011-07-13 実験手法 SOLUTION NMR 主引用文献 Structure of the Mycobacterium tuberculosis OmpATb protein: A model of an oligomeric channel in the mycobacterial cell wall. Proteins, 79, 2011
2LBT	Solution structure of the C domain of RV0899(D236A) from mycobacterium tuberculosis 分子名称: Uncharacterized protein Rv0899/MT0922 著者 Yao, Y, Marassi, F. 登録日 2011-04-06 公開日 2012-01-04 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Molecular Structure and Peptidoglycan Recognition of Mycobacterium tuberculosis ArfA (Rv0899). J.Mol.Biol., 416, 2012
2LCA	Solution structure of the C domain of RV0899 from mycobacterium tuberculosis 分子名称: Uncharacterized protein Rv0899/MT0922 著者 Marassi, F, Yao, Y. 登録日 2011-04-26 公開日 2012-01-04 最終更新日 2023-12-06 実験手法 SOLUTION NMR 主引用文献 Molecular Structure and Peptidoglycan Recognition of Mycobacterium tuberculosis ArfA (Rv0899). J.Mol.Biol., 416, 2012
2N48	EC-NMR Structure of Escherichia coli YiaD Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target ER553 分子名称: Probable lipoprotein YiaD 著者 Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2015-06-17 公開日 2015-07-01 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Protein structure determination by combining sparse NMR data with evolutionary couplings. Nat.Methods, 12, 2015
2MQE	Solution structure of Escherichia coli Outer membrane protein A C-terminal domain 分子名称: OmpA domain protein transmembrane region-containing protein 著者 Ishida, H, Vogel, H. 登録日 2014-06-19 公開日 2014-09-03 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 The periplasmic domain of Escherichia coli outer membrane protein A can undergo a localized temperature dependent structural transition. Biochim.Biophys.Acta, 1838, 2014
3S06	The crystal structure of the periplasmic domain of Helicobacter pylori MotB (residues 97-256, P3121). 分子名称: Motility protein B, SULFATE ION 著者 Roujeinikova, A.R. 登録日 2011-05-13 公開日 2012-03-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Role of the MotB linker in the assembly and activation of the bacterial flagellar motor. Acta Crystallogr.,Sect.D, 67, 2011

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