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3GCO
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BU of 3gco by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYQF OMP peptide
Descriptor: DNRDGNVYQF peptide, Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-22
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3GDS
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BU of 3gds by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide
Descriptor: DNRDGNVYYF peptide, Protease degS
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-24
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3GDU
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BU of 3gdu by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide
Descriptor: DegS protease, YRF peptide
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-24
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3GCN
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BU of 3gcn by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF)
Descriptor: Protease degS, YQF peptide
Authors:Sohn, J, Sauer, R.T, Grant, R.A.
Deposit date:2009-02-22
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Mechanisms of allosteric activation of the DegS protease by OMP-peptide binding and protein-substrate binding
To be Published
3GDV
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BU of 3gdv by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide
Descriptor: DegS protease, YQF peptide
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-24
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
Descriptor: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
Authors:Makabe, K, Huang, J, Koide, A, Koide, S.
Deposit date:2008-03-08
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
2KA9
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BU of 2ka9 by Molmil
Solution structure of PSD-95 PDZ12 complexed with cypin peptide
Descriptor: Disks large homolog 4, cypin peptide
Authors:Wang, W.N, Weng, J.W, Zhang, X, Liu, M.L, Zhang, M.J.
Deposit date:2008-11-03
Release date:2009-06-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Creating conformational entropy by increasing interdomain mobility in ligand binding regulation: a revisit to N-terminal tandem PDZ domains of PSD-95
J.Am.Chem.Soc., 131, 2009
3E17
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BU of 3e17 by Molmil
Crystal structure of the second PDZ domain from human Zona Occludens-2
Descriptor: Tight junction protein ZO-2
Authors:Chen, H, Tong, S.L, Teng, M.K, Niu, L.W.
Deposit date:2008-08-01
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the second PDZ domain from human zonula occludens 2
Acta Crystallogr.,Sect.F, 65, 2009
3ID2
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BU of 3id2 by Molmil
Crystal Structure of RseP PDZ2 domain
Descriptor: IODIDE ION, Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.089 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3ID4
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BU of 3id4 by Molmil
Crystal Structure of RseP PDZ2 domain fused GKASPV peptide
Descriptor: Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3ID3
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BU of 3id3 by Molmil
Crystal Structure of RseP PDZ2 I304A domain
Descriptor: Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3FY5
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BU of 3fy5 by Molmil
Dishevelled PDZ domain homodimer
Descriptor: Segment polarity protein dishevelled homolog DVL-2
Authors:Earnest, T, Friedland, N, Hung, L.-W, Moon, R.
Deposit date:2009-01-21
Release date:2009-09-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:

2KAW
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BU of 2kaw by Molmil
NMR structure of the mDvl1 PDZ domain in complex with its inhibitor
Descriptor: Segment polarity protein dishevelled homolog DVL-1, [(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
Authors:Lee, H.J, Shao, Y, Wang, N.X, Shi, D.L, Zheng, J.J.
Deposit date:2008-11-17
Release date:2009-09-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Sulindac inhibits canonical Wnt signaling by blocking the PDZ domain of the protein Dishevelled.
Angew.Chem.Int.Ed.Engl., 48, 2009
2KOJ
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BU of 2koj by Molmil
Solution structure of mouse Par-3 PDZ2 (residues 450-558)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-23
Release date:2009-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Macromolecular Structure Determination by NMR Sepectroscopy
Structural Bioinformatics, 2nd edition, 2009
2KOM
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BU of 2kom by Molmil
Solution structure of humar Par-3b PDZ2 (residues 451-549)
Descriptor: Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-09-24
Release date:2009-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Rapid, robotic, small-scale protein production for NMR screening and structure determination.
Protein Sci., 19, 2010
3GJ9
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BU of 3gj9 by Molmil
crystal structure of TIP-1 in complex with c-terminal of Kir2.3
Descriptor: C-terminal peptide from Inward rectifier potassium channel 4, CHLORIDE ION, Tax1-binding protein 3, ...
Authors:Shen, Y.
Deposit date:2009-03-08
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular mechanism of inward rectifier potassium channel 2.3 regulation by tax-interacting protein-1
J.Mol.Biol., 392, 2009
2KJD
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BU of 2kjd by Molmil
Solution structure of extended PDZ2 domain from NHERF1 (150-270)
Descriptor: Sodium/hydrogen exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Cowburn, D, Bu, Z.
Deposit date:2009-05-27
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A dynamic intramolecular conformational switch autoregulates the scaffolding protein NHERF1
To be Published
2KRG
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BU of 2krg by Molmil
Solution Structure of human sodium/ hydrogen exchange regulatory factor 1(150-358)
Descriptor: Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Dai, Z, Li, J, Baxter, S, Callaway, D.J.E, Cowburn, D, Bu, Z.
Deposit date:2009-12-17
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A conformational switch in the scaffolding protein NHERF1 controls autoinhibition and complex formation.
J.Biol.Chem., 285, 2010
2KG2
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BU of 2kg2 by Molmil
Solution structure of a PDZ protein
Descriptor: Tax1-binding protein 3
Authors:Durney, M.A, Birrane, G, Anklin, C, Soni, A, Ladias, J.A.A.
Deposit date:2009-03-02
Release date:2010-01-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the human Tax-interacting protein-1.
J.Biomol.Nmr, 45, 2009
2WL7
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BU of 2wl7 by Molmil
Crystal structure of the PSD93 PDZ1 domain
Descriptor: CHLORIDE ION, DISKS LARGE HOMOLOG 2, SULFATE ION
Authors:Fiorentini, M, Kallehauge, A, Kristensen, O, Kastrup, J.S, Gajhede, M.
Deposit date:2009-06-22
Release date:2010-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Structure of the First Pdz Domain of Human Psd-93.
Acta Crystallogr.,Sect.F, 65, 2009
3K1R
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BU of 3k1r by Molmil
Structure of harmonin NPDZ1 in complex with the SAM-PBM of Sans
Descriptor: Harmonin, Usher syndrome type-1G protein
Authors:Pan, L, Yan, J, Zhang, M.
Deposit date:2009-09-28
Release date:2010-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of the harmonin/sans complex reveals an unexpected interaction mode of the two Usher syndrome proteins
Proc.Natl.Acad.Sci.USA, 107, 2010
2KOH
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BU of 2koh by Molmil
NMR structure of mouse Par3-PDZ3 in complex with VE-Cadherin C-terminus
Descriptor: Cadherin-5, Partitioning defective 3 homolog
Authors:Volkman, B.F, Tyler, R.C, Peterson, F.C.
Deposit date:2009-09-22
Release date:2010-02-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Distal interactions within the par3-VE-cadherin complex.
Biochemistry, 49, 2010
3LNX
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BU of 3lnx by Molmil
Second PDZ domain from human PTP1E
Descriptor: IODIDE ION, THIOCYANATE ION, Tyrosine-protein phosphatase non-receptor type 13
Authors:Zhang, J, Chang, A, Ke, H, Phillips Jr, G.N, Lee, A.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-02-03
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Crystallographic and nuclear magnetic resonance evaluation of the impact of peptide binding to the second PDZ domain of protein tyrosine phosphatase 1E.
Biochemistry, 49, 2010
3EGG
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BU of 3egg by Molmil
Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Spinophilin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MANGANESE (II) ION, ...
Authors:Ragusa, M.J, Page, R, Peti, W.
Deposit date:2008-09-10
Release date:2010-03-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
3EGH
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BU of 3egh by Molmil
Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1), the PP1 binding and PDZ domains of Spinophilin and the small natural molecular toxin Nodularin-R
Descriptor: GLYCEROL, MANGANESE (II) ION, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, ...
Authors:Ragusa, M.J, Page, R, Peti, W.
Deposit date:2008-09-10
Release date:2010-03-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010

220113

數據於2024-05-22公開中

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