PDB: 67 件ウェブページステータス検索Chemie searchBIRD

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6ZAB	Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group) 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... 著者 Morera, S, Naretto, A, Vigouroux, A, Legrand, P. 登録日 2020-06-05 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
6Z74	Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ... 著者 Morera, S, Vigouroux, V. 登録日 2020-05-29 公開日 2020-12-02 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
6ZA7	Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ... 著者 Morera, S, Vigouroux, A, Legrand, P. 登録日 2020-06-04 公開日 2020-12-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum. Nucleic Acids Res., 49, 2021
7C7E	Crystal structure of C terminal domain of Escherichia coli DgoR 分子名称: Putative DNA-binding transcriptional regulator, SULFATE ION, TRIETHYLENE GLYCOL, ... 著者 Lin, W. 登録日 2020-05-25 公開日 2021-01-20 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 Structural and Functional Analyses of the Transcription Repressor DgoR From Escherichia coli Reveal a Divalent Metal-Containing D-Galactonate Binding Pocket. Front Microbiol, 11, 2020
6WG7	Coordinates of NanR dimer fitted in Hexameric NanR-DNA hetero-complex cryo-EM map 分子名称: DNA (35-MER), HTH-type transcriptional repressor NanR 著者 Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D. 登録日 2020-04-05 公開日 2021-03-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (8.3 Å) 主引用文献 Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism. Nat Commun, 12, 2021
6WFQ	NanR dimer-DNA hetero-complex 分子名称: DNA (5'-D(P*GP*GP*TP*AP*TP*AP*AP*CP*AP*GP*GP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*CP*CP*TP*GP*TP*TP*AP*TP*AP*CP*C)-3'), HTH-type transcriptional repressor NanR 著者 Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D. 登録日 2020-04-03 公開日 2021-03-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism. Nat Commun, 12, 2021
7OZ3	S. agalactiae BusR in complex with its busA-promotor DNA 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, GntR family transcriptional regulator, pBusA_for, ... 著者 Bandera, A.M, Witte, G. 登録日 2021-06-25 公開日 2021-08-11 最終更新日 2021-10-13 実験手法 ELECTRON MICROSCOPY (4.46 Å) 主引用文献 BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture. Nucleic Acids Res., 49, 2021
7B5Y	S. agalactiae BusR in complex with its busAB-promotor DNA 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, BusR binding site in the busAB promotor. strand1, BusR binding site in the busAB promotor. strand2, ... 著者 Bandera, A.M, Witte, G. 登録日 2020-12-07 公開日 2021-08-11 最終更新日 2021-10-13 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture. Nucleic Acids Res., 49, 2021
7B5T	S. agalactiae BusR transcription factor 分子名称: GntR family transcriptional regulator 著者 Bandera, A.M, Witte, G. 登録日 2020-12-07 公開日 2021-08-11 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture. Nucleic Acids Res., 49, 2021
7U5Q	Crystal structure of transcriptional regulator, GntR family, from Brucella melitensis 分子名称: BROMIDE ION, Transcriptional regulator, GntR family protein, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-03-02 公開日 2022-03-09 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of transcriptional regulator, GntR family, from Brucella melitensis To be Published
7WJG	Streptococcus mutans BusR transcriptional factor 分子名称: CITRIC ACID, Putative transcriptional regulator (GntR family) 著者 Li, X, Liu, N. 登録日 2022-01-06 公開日 2023-01-11 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Structural study of transcriptional factor BusR To Be Published
7XP0	Crystal structure of PmiR from Pseudomonas aeruginosa 分子名称: Probable transcriptional regulator, SULFATE ION, ZINC ION 著者 Zhang, Y.X, Liang, H.H, Gan, J.H. 登録日 2022-05-02 公開日 2023-04-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 PmiR senses 2-methylisocitrate levels to regulate bacterial virulence in Pseudomonas aeruginosa. Sci Adv, 8, 2022
7XP1	Crystal structure of PmiR from Pseudomonas aeruginosa 分子名称: ALPHA-METHYLISOCITRIC ACID, GLYCEROL, Probable transcriptional regulator, ... 著者 Zhang, Y.X, Liang, H.H, Gan, J.H. 登録日 2022-05-02 公開日 2023-04-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 PmiR senses 2-methylisocitrate levels to regulate bacterial virulence in Pseudomonas aeruginosa. Sci Adv, 8, 2022
7ZPA	Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C1 symmetry 分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein 著者 Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M. 登録日 2022-04-27 公開日 2023-07-05 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR. Nucleic Acids Res., 51, 2023
7ZN5	Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C2 symmetry. 分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein 著者 Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M. 登録日 2022-04-20 公開日 2023-07-05 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR. Nucleic Acids Res., 51, 2023
7ZTH	Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the open conformation 分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein 著者 Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M. 登録日 2022-05-10 公開日 2023-07-05 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR. Nucleic Acids Res., 51, 2023
7ZLA	Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the half-closed conformation 分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein 著者 Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Savino, C, Exertier, C, Bolognesi, M, Chaves Sanjuan, A. 登録日 2022-04-14 公開日 2023-07-05 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR. Nucleic Acids Res., 51, 2023

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