PDB: 109 resultsInfo pagesStatus searchChemie searchBIRD

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7VYW	Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide Descriptor: Chromo domain-containing protein LHP1, SULFATE ION, methylated histone H3K9 peptide Authors: Liu, Y, Zhang, M, Min, J. Deposit date: 2021-11-15 Release date: 2022-02-02 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain. J.Biol.Chem., 298, 2022
7R78	cryo-EM structure of DNMT5 quaternary complex with hemimethylated DNA, AMP-PNP and SAH Descriptor: DNA (5'-D(*TP*GP*CP*GP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(P*CP*AP*GP*(5CM)P*GP*CP*AP*T)-3'), DNA repair protein Rad8, ... Authors: Wang, J, Patel, D.J. Deposit date: 2021-06-24 Release date: 2022-02-23 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance. Mol.Cell, 82, 2022
7R76	Cryo-EM structure of DNMT5 in apo state Descriptor: DNA repair protein Rad8, ZINC ION Authors: Wang, J, Patel, D.J. Deposit date: 2021-06-24 Release date: 2022-02-23 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance. Mol.Cell, 82, 2022
7R77	Cryo-EM structure of DNMT5 binary complex with hemimethylated DNA Descriptor: DNA (5'-D(P*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), DNA repair protein Rad8, ZINC ION Authors: Wang, J, Patel, D.J. Deposit date: 2021-06-24 Release date: 2022-02-23 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance. Mol.Cell, 82, 2022
7T02	Cryo-EM structure of DNMT5 pseudo-ternary complex solved by incubation with hemimethylated DNA and SAM Descriptor: DNA (5'-D(*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), DNA repair protein Rad8, ... Authors: Wang, J, Patel, D.J. Deposit date: 2021-11-29 Release date: 2022-02-23 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance. Mol.Cell, 82, 2022
7TN2	Composite model of a Chd1-nucleosome complex in the nucleotide-free state derived from 2.3A and 2.7A Cryo-EM maps Descriptor: Chromo domain-containing protein 1, DNA Lagging Strand, DNA Tracking Strand, ... Authors: Nodelman, I.M, Bowman, G.D, Armache, J.-P. Deposit date: 2022-01-20 Release date: 2022-03-02 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state. Nat.Struct.Mol.Biol., 29, 2022
7UBU	Crystal structure of ZMET2 in complex with hemimethylated CAG DNA and a histone H3Kc9me2 peptide Descriptor: 5MC SSDNA, C49 SSDNA, DNA (cytosine-5)-methyltransferase 1, ... Authors: Fang, J, Song, J. Deposit date: 2022-03-15 Release date: 2022-06-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Mechanistic basis for maintenance of CHG DNA methylation in plants. Nat Commun, 13, 2022
7VRF	Crystal structure of Oxpecker chromodomain in complex with H3K9me3 Descriptor: H3K9me3, Oxpecker Authors: Huang, Y, Jin, Z, Yu, B. Deposit date: 2021-10-22 Release date: 2022-10-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural insights into the chromodomain of Oxpecker in complex with histone H3 lysine 9 trimethylation reveal a transposon silencing mechanism by heterodimerization. Biochem.Biophys.Res.Commun., 652, 2023
8SP6	COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST Descriptor: (1s,4s)-bicyclo[2.2.1]heptane, (5R0)FAL(MLZ)(5R5), Chromodomain Y-like protein 2, ... Authors: Song, X, Beldar, S, Dong, A, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) Deposit date: 2023-05-02 Release date: 2024-03-13 Method: X-RAY DIFFRACTION (1.45 Å) Cite: COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST To be published

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