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5CH4
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BU of 5ch4 by Molmil
Peptide-Bound State of Thermus thermophilus SecYEG
分子名称: Protein translocase subunit SecE, Protein translocase subunit SecY, Putative preprotein translocase, ...
著者Tanaka, Y, Sugano, Y, Takemoto, M, Kusakizako, T, Kumazaki, K, Ishitani, R, Nureki, O, Tsukazaki, T.
登録日2015-07-10
公開日2015-11-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State.
Cell Rep, 13, 2015
2ZJS
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BU of 2zjs by Molmil
Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment
分子名称: Fab56 (heavy chain), Fab56 (light chain), Preprotein translocase SecE subunit, ...
著者Tsukazaki, T, Mori, H, Fukai, S, Ishitani, R, Perederina, A, Vassylyev, D.G, Ito, K, Nureki, O.
登録日2008-03-08
公開日2008-10-14
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Conformational transition of Sec machinery inferred from bacterial SecYE structures
Nature, 455, 2008
3BO1
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BU of 3bo1 by Molmil
Ribosome-SecY complex
分子名称: 23S RIBOSOMAL RNA, PREPROTEIN TRANSLOCASE SecE SUBUNIT, PREPROTEIN TRANSLOCASE SecY SUBUNIT, ...
著者Akey, C.W, Menetret, J.F.
登録日2007-12-15
公開日2008-12-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Ribosome binding of a single copy of the SecY complex: implications for protein translocation
Mol.Cell, 28, 2007
3BO0
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BU of 3bo0 by Molmil
Ribosome-SecY complex
分子名称: 23S RIBOSOMAL RNA, PREPROTEIN TRANSLOCASE SecE SUBUNIT, PREPROTEIN TRANSLOCASE SecY SUBUNIT, ...
著者Akey, C.W, Menetret, J.F.
登録日2007-12-15
公開日2008-12-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Ribosome binding of a single copy of the SecY complex: implications for protein translocation
Mol.Cell, 28, 2007
3DIN
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BU of 3din by Molmil
Crystal structure of the protein-translocation complex formed by the SecY channel and the SecA ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Zimmer, J, Nam, Y, Rapoport, T.A.
登録日2008-06-20
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structure of a complex of the ATPase SecA and the protein-translocation channel.
Nature, 455, 2008
3DKN
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BU of 3dkn by Molmil
Sec61 in the Canine ribosome-channel complex from the endoplasmic reticulum
分子名称: Preprotein translocase subunit secE, Preprotein translocase subunit secG, Preprotein translocase subunit secY, ...
著者Menetret, J.-F, Akey, C.
登録日2008-06-25
公開日2008-08-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Single copies of Sec61 and TRAP associate with a nontranslating mammalian ribosome.
Structure, 16, 2008
3DL8
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BU of 3dl8 by Molmil
Structure of the complex of aquifex aeolicus SecYEG and bacillus subtilis SecA
分子名称: Preprotein translocase subunit secY, Protein translocase subunit secA, Protein-export membrane protein secG, ...
著者Nam, Y, Zimmer, J, Rapoport, T.A.
登録日2008-06-26
公開日2008-12-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (7.5 Å)
主引用文献Structure of a complex of the ATPase SecA and the protein-translocation channel.
Nature, 455, 2008
8DNY
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BU of 8dny by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by decatransin
分子名称: Decatransin peptide inhibitor, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DNZ
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BU of 8dnz by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by apratoxin F
分子名称: Apratoxin F peptide inhibitor, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DNX
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BU of 8dnx by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by cotransin
分子名称: Cotransin analogue peptide inhibitor, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DO3
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BU of 8do3 by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by eeyarestatin I
分子名称: N'-(4-chlorophenyl)-N-[(4R)-3-(4-chlorophenyl)-5,5-dimethyl-1-(2-{(2E)-2-[(2E)-3-(5-nitrofuran-2-yl)prop-2-en-1-ylidene]hydrazinyl}-2-oxoethyl)-2-oxoimidazolidin-4-yl]-N-hydroxyurea, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DNV
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BU of 8dnv by Molmil
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 1)
分子名称: Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, Protein transport protein Sec61 subunit gamma
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DNW
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BU of 8dnw by Molmil
Cryo-EM structure of the human Sec61 complex in a partially-open apo state (Class 2)
分子名称: Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, Protein transport protein Sec61 subunit gamma
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DO0
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BU of 8do0 by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by mycolactone
分子名称: Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, Protein transport protein Sec61 subunit gamma, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DO1
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BU of 8do1 by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by ipomoeassin F
分子名称: Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, Protein transport protein Sec61 subunit gamma, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
8DO2
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BU of 8do2 by Molmil
Cryo-EM structure of the human Sec61 complex inhibited by cyclotriazadisulfonamide (CADA)
分子名称: 9-benzyl-1,5-bis(4-methylbenzene-1-sulfonyl)-3-methylidene-1,5,9-triazacyclododecane, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit beta, ...
著者Park, E, Itskanov, S.
登録日2022-07-12
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献A common mechanism of Sec61 translocon inhibition by small molecules.
Nat.Chem.Biol., 19, 2023
6FTJ
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BU of 6ftj by Molmil
Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Braunger, K, Becker, T, Beckmann, R.
登録日2018-02-22
公開日2018-03-21
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum.
Science, 360, 2018
5GAE
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BU of 5gae by Molmil
RNC in complex with a translocating SecYEG
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
登録日2015-11-25
公開日2016-01-27
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
7AFT
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BU of 7aft by Molmil
Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon
分子名称: Mating factor alpha-1,Mating factor alpha-1, Protein translocation protein SEC63, Protein transport protein SBH1, ...
著者Weng, T.-H, Beatrix, B, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R.
登録日2020-09-20
公開日2020-12-02
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Architecture of the active post-translational Sec translocon.
Embo J., 40, 2021
6W6L
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BU of 6w6l by Molmil
Cryo-EM structure of the human ribosome-TMCO1 translocon
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Keenan, R.J, McGilvray, P.T.
登録日2020-03-17
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献An ER translocon for multi-pass membrane protein biogenesis.
Elife, 9, 2020
5NCO
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BU of 5nco by Molmil
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
分子名称: 23S rRNA, 4.5S SRP RNA (Ffs), 50S ribosomal protein L10, ...
著者Jomaa, A, Hwang Fu, Y, Boerhinger, D, Leibundgut, M, Shan, S.O, Ban, N.
登録日2017-03-06
公開日2017-05-24
最終更新日2018-03-28
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of the quaternary complex between SRP, SR, and translocon bound to the translating ribosome.
Nat Commun, 8, 2017
7TM3
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BU of 7tm3 by Molmil
Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S.
登録日2022-01-19
公開日2022-10-19
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mechanism of an intramembrane chaperone for multipass membrane proteins.
Nature, 611, 2022
8BTK
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BU of 8btk by Molmil
Structure of the TRAP complex with the Sec translocon and a translating ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Jaskolowski, M, Jomaa, A, Gamerdinger, M, Shrestha, S, Leibundgut, M, Deuerling, E, Ban, N.
登録日2022-11-29
公開日2023-05-24
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis of the TRAP complex function in ER protein biogenesis.
Nat.Struct.Mol.Biol., 30, 2023
7W5Z
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BU of 7w5z by Molmil
Cryo-EM structure of Tetrahymena thermophila mitochondrial complex IV, composite dimer model
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-oxoglutarate/malate carrier protein, CARDIOLIPIN, ...
著者Zhou, L, Maldonado, M, Padavannil, A, Letts, J.
登録日2021-11-30
公開日2022-04-06
最終更新日2022-06-01
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structures of Tetrahymena 's respiratory chain reveal the diversity of eukaryotic core metabolism.
Science, 376, 2022
8BF9
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BU of 8bf9 by Molmil
Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
分子名称: 60S ribosomal protein L39, Large ribosomal subunit protein eL31, Large ribosomal subunit protein eL38, ...
著者Karki, S, Javanainen, M, Tranter, D, Rehan, S, Huiskonen, J, Happonen, L, Paavilainen, V.
登録日2022-10-24
公開日2023-11-01
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
Embo Rep., 24, 2023

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件を2024-05-08に公開中

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