Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1W68
DownloadVisualize
BU of 1w68 by Molmil
Crystal Structure of Mouse Ribonucleotide Reductase Subunit R2 under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster.
Descriptor: MU-OXO-DIIRON, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 CHAIN
Authors:Karlsen, S, Strand, K.R, Kolberg, M, Rohr, A.K, Gorbitz, C.H, Andersson, K.K.
Deposit date:2004-08-16
Release date:2004-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structural Studies of Changes in the Native Dinuclear Iron Center of Ribonucleotide Reductase Protein R2 from Mouse
J.Biol.Chem., 279, 2004
7AI8
DownloadVisualize
BU of 7ai8 by Molmil
Structure of Ribonucleotide reductase R2 from Escherichia coli collected by still serial crystallography on a COC membrane at a synchrotron source
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase 1 subunit beta
Authors:Aurelius, O, John, J, Martiel, I, Padeste, C, Karpik, A, Huang, C.Y, Hogbom, M, Wang, M, Marsh, M.
Deposit date:2020-09-26
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Versatile microporous polymer-based supports for serial macromolecular crystallography.
Acta Crystallogr D Struct Biol, 77, 2021
7AI9
DownloadVisualize
BU of 7ai9 by Molmil
Structure of Ribonucleotide reductase R2 from Escherichia coli collected by rotation serial crystallography on a COC membrane at a synchrotron source
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase 1 subunit beta
Authors:Aurelius, O, John, J, Martiel, I, Padeste, C, Karpik, A, Huang, C.Y, Hogbom, M, Wang, M, Marsh, M.
Deposit date:2020-09-26
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Versatile microporous polymer-based supports for serial macromolecular crystallography.
Acta Crystallogr D Struct Biol, 77, 2021
7AIL
DownloadVisualize
BU of 7ail by Molmil
Ribonucleotide Reductase R2m protein from Aquifex aeolicus
Descriptor: FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Rehling, D, Scaletti, E.R, Stenmark, P.
Deposit date:2020-09-27
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus.
Biochemistry, 61, 2022
7AIK
DownloadVisualize
BU of 7aik by Molmil
Ribonucleotide Reductase R2 protein from Aquifex aeolicus
Descriptor: FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta,Ribonucleoside-diphosphate reductase subunit beta
Authors:Rehling, D, Scaletti, E.R, Stenmark, P.
Deposit date:2020-09-27
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus.
Biochemistry, 61, 2022
1YFD
DownloadVisualize
BU of 1yfd by Molmil
Crystal structure of the Y122H mutant of ribonucleotide reductase R2 protein from E. coli
Descriptor: MERCURY (II) ION, MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Kolberg, M, Logan, D.T, Bleifuss, G, Poetsch, S, Sjoeberg, B.M, Graeslund, A, Lubitz, W, Lassmann, G, Lendzian, F.
Deposit date:2004-12-31
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A new tyrosyl radical on Phe208 as ligand to the diiron center in Escherichia coli ribonucleotide reductase, mutant R2-Y122H. Combined x-ray diffraction and EPR/ENDOR studies
J.Biol.Chem., 280, 2005
1XSM
DownloadVisualize
BU of 1xsm by Molmil
PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE FROM MOUSE
Descriptor: FE (III) ION, RIBONUCLEOTIDE REDUCTASE R2
Authors:Kauppi, B, Nielsen, B.N, Ramaswamy, S, Kjoller-Larsen, I, Thelander, M, Thelander, L, Eklund, H.
Deposit date:1996-07-03
Release date:1997-01-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2.
J.Mol.Biol., 262, 1996
4AC8
DownloadVisualize
BU of 4ac8 by Molmil
R2-like ligand binding Mn-Fe oxidase from M. tuberculosis with an organized C-terminal helix
Descriptor: CALCIUM ION, FE (III) ION, GLYCEROL, ...
Authors:Andersson, C.S, Berthold, C.L, Hogbom, M.
Deposit date:2011-12-14
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Dynamic C-Terminal Segment in the Mycobacterium Tuberculosis Mn/Fe R2Lox Protein Can Adopt a Helical Structure with Possible Functional Consequences.
Chem.Biodivers., 9, 2012
6TQZ
DownloadVisualize
BU of 6tqz by Molmil
Crystal structure of ribonucleotide reductase NrdF L61G variant from Bacillus anthracis aerobically soaked with Fe(II) and Mn(II) ions
Descriptor: FE (II) ION, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ...
Authors:Grave, K, Hogbom, M.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.099335 Å)
Cite:The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
J.Biol.Inorg.Chem., 25, 2020
6TQV
DownloadVisualize
BU of 6tqv by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis aerobically soaked with Fe(II) and Mn(II) ions
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Grave, K, Hogbom, M.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35000968 Å)
Cite:The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
J.Biol.Inorg.Chem., 25, 2020
6TQX
DownloadVisualize
BU of 6tqx by Molmil
Crystal structure of apo (metal-free) ribonucleotide reductase NrdF L61G variant from Bacillus anthracis
Descriptor: Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Grave, K, Hogbom, M.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.0500176 Å)
Cite:The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
J.Biol.Inorg.Chem., 25, 2020
6I90
DownloadVisualize
BU of 6i90 by Molmil
R2-like ligand-binding oxidase G68F mutant with aerobically reconstituted Mn/Fe cofactor
Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2018-11-22
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019
6I93
DownloadVisualize
BU of 6i93 by Molmil
R2-like ligand-binding oxidase G68L mutant with aerobically reconstituted Fe/Fe cofactor
Descriptor: FE (III) ION, OCTANOIC ACID (CAPRYLIC ACID), Ribonucleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2018-11-22
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019
6I92
DownloadVisualize
BU of 6i92 by Molmil
R2-like ligand-binding oxidase G68F mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, Ribonucleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2018-11-22
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019
6GP3
DownloadVisualize
BU of 6gp3 by Molmil
Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, inactive form
Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase beta chain
Authors:Srinivas, V, Lebrette, H, Lundin, D, Kutin, Y, Sahlin, M, Lerche, M, Enrich, J, Branca, R.M.M, Cox, N, Sjoberg, B.M, Hogbom, M.
Deposit date:2018-06-05
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens.
Nature, 563, 2018
6TQY
DownloadVisualize
BU of 6tqy by Molmil
Crystal structure of ribonucleotide reductase NrdF L61G variant from Bacillus anthracis anaerobically soaked with Fe(II) and Mn(II) ions
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Grave, K, Hogbom, M.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
J.Biol.Inorg.Chem., 25, 2020
6TQW
DownloadVisualize
BU of 6tqw by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis anaerobically soaked with Fe(II) and Mn(II) ions
Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Grave, K, Hogbom, M.
Deposit date:2019-12-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
J.Biol.Inorg.Chem., 25, 2020
6I95
DownloadVisualize
BU of 6i95 by Molmil
R2-like ligand-binding oxidase G68L mutant with anaerobically reconstituted Mn/Fe cofactor
Descriptor: FE (II) ION, MANGANESE (II) ION, OCTANOIC ACID (CAPRYLIC ACID), ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2018-11-22
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.646 Å)
Cite:Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019
3MJO
DownloadVisualize
BU of 3mjo by Molmil
Small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes
Descriptor: MANGANESE (III) ION, Ribonucleotide reductase subunit R2F
Authors:Ogata, H, Stolle, P, Stehr, M, Auling, G, Lubitz, W.
Deposit date:2010-04-13
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A Tyrosyl-Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes.
J.Am.Chem.Soc., 132, 2010
6I94
DownloadVisualize
BU of 6i94 by Molmil
R2-like ligand-binding oxidase G68L mutant with non-activated Mn/Mn cofactor (after aerobic reconstitution with Mn and Fe)
Descriptor: MANGANESE (II) ION, OCTANOIC ACID (CAPRYLIC ACID), Ribonucleotide reductase small subunit
Authors:Griese, J.J, Hogbom, M.
Deposit date:2018-11-22
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Chemical flexibility of heterobimetallic Mn/Fe cofactors: R2lox and R2c proteins.
J.Biol.Chem., 294, 2019
3N37
DownloadVisualize
BU of 3n37 by Molmil
Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli
Descriptor: GLYCEROL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
3N38
DownloadVisualize
BU of 3n38 by Molmil
Ribonucleotide Reductase NrdF from Escherichia coli Soaked with Ferrous Ions
Descriptor: FE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta
Authors:Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
Deposit date:2010-05-19
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for activation of class Ib ribonucleotide reductase.
Science, 329, 2010
1H0O
DownloadVisualize
BU of 1h0o by Molmil
Cobalt substitution of mouse R2 ribonucleotide reductase to model the reactive diferrous state
Descriptor: COBALT (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE
Authors:Strand, K.R, Karlsen, S, Andersson, K.K.
Deposit date:2002-06-26
Release date:2002-07-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cobalt Substitution of Mouse R2 Ribonucleotide Reductase as a Model for Thereactive Diferrous State. Spectroscopic and Structural Evidence for a Ferromagnetically Coupled Dinuclear Cobalt Cluster
J.Biol.Chem., 277, 2002
1H0N
DownloadVisualize
BU of 1h0n by Molmil
Cobalt substitution of mouse R2 ribonucleotide reductase to model the reactive diferrous state
Descriptor: COBALT (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE
Authors:Strand, K.R, Karlsen, S, Andersson, K.K.
Deposit date:2002-06-26
Release date:2002-07-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Cobalt Substitution of Mouse R2 Ribonucleotide Reductase as a Model for Thereactive Diferrous State. Spectroscopic and Structural Evidence for a Ferromagnetically Coupled Dinuclear Cobalt Cluster
J.Biol.Chem., 277, 2002
1JPR
DownloadVisualize
BU of 1jpr by Molmil
Mn substituted Ribonucleotide reductase R2 from E. coli oxidized by nitric oxide
Descriptor: MANGANESE (II) ION, MERCURY (II) ION, Protein R2 of Ribonucleotide reductase
Authors:Hogbom, M, Andersson, M.E, Nordlund, P.
Deposit date:2001-08-03
Release date:2001-08-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structures of oxidized dinuclear manganese centres in Mn-substituted class I ribonucleotide reductase from Escherichia coli: carboxylate shifts with implications for O2 activation and radical generation.
J.Biol.Inorg.Chem., 6, 2001

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon