8AAG
| H1-bound palindromic nucleosome, state 1 | 分子名称: | DNA/RNA (185-MER), Histone H1.0-B, Histone H2A type 1, ... | 著者 | Alegrio Louro, J, Beinsteiner, B, Cheng, T.C, Patel, A.K.M, Boopathi, R, Angelov, D, Hamiche, A, Bednar, J, Kale, S, Dimitrov, S, Klaholz, B. | 登録日 | 2022-07-01 | 公開日 | 2022-12-14 | 最終更新日 | 2023-02-15 | 実験手法 | ELECTRON MICROSCOPY (10 Å) | 主引用文献 | Nucleosome dyad determines the H1 C-terminus collapse on distinct DNA arms. Structure, 31, 2023
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8ATF
| Nucleosome-bound Ino80 ATPase | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, DNA (226-MER), DNA (227-MER), ... | 著者 | Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P. | 登録日 | 2022-08-23 | 公開日 | 2022-12-14 | 最終更新日 | 2022-12-28 | 実験手法 | ELECTRON MICROSCOPY (3.45 Å) | 主引用文献 | Structural mechanism of extranucleosomal DNA readout by the INO80 complex. Sci Adv, 8, 2022
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8B0A
| Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome | 分子名称: | Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ... | 著者 | Bacic, L, Gaullier, G, Deindl, S. | 登録日 | 2022-09-07 | 公開日 | 2023-09-20 | 最終更新日 | 2024-04-03 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1. Nat Commun, 15, 2024
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8BZ1
| RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W) | 分子名称: | DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB11-a, ... | 著者 | Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P. | 登録日 | 2022-12-14 | 公開日 | 2023-05-03 | 最終更新日 | 2023-06-14 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | Structural basis of transcription reduction by a promoter-proximal +1 nucleosome. Mol.Cell, 83, 2023
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8CBN
| structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome | 分子名称: | Histone H2A, Histone H2B 1.1, Histone H3, ... | 著者 | Koutna, E, Kouba, T, Novacek, J, Veverka, V. | 登録日 | 2023-01-25 | 公開日 | 2023-12-27 | 実験手法 | ELECTRON MICROSCOPY (3.34 Å) | 主引用文献 | Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
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6RYU
| Nucleosome-CHD4 complex structure (two CHD4 copies) | 分子名称: | Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ... | 著者 | Farnung, L, Ochmann, M, Cramer, P. | 登録日 | 2019-06-12 | 公開日 | 2020-07-15 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (4 Å) | 主引用文献 | Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations. Elife, 9, 2020
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6RYR
| Nucleosome-CHD4 complex structure (single CHD4 copy) | 分子名称: | Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ... | 著者 | Farnung, L, Ochmann, M, Cramer, P. | 登録日 | 2019-06-11 | 公開日 | 2020-07-15 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations. Elife, 9, 2020
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6S01
| Structure of LEDGF PWWP domain bound H3K36 methylated nucleosome | 分子名称: | Histone H2A, Histone H2B 1.1, Histone H3, ... | 著者 | Wang, H, Farnung, L, Dienemann, C, Cramer, P. | 登録日 | 2019-06-13 | 公開日 | 2019-12-18 | 最終更新日 | 2020-01-22 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | Structure of H3K36-methylated nucleosome-PWWP complex reveals multivalent cross-gyre binding. Nat.Struct.Mol.Biol., 27, 2020
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6RNY
| PFV intasome - nucleosome strand transfer complex | 分子名称: | DNA (108-MER), DNA (128-MER), DNA (33-MER), ... | 著者 | Pye, V.E, Renault, L, Maskell, D.P, Cherepanov, P, Costa, A. | 登録日 | 2019-05-09 | 公開日 | 2019-09-25 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | 主引用文献 | Retroviral integration into nucleosomes through DNA looping and sliding along the histone octamer. Nat Commun, 10, 2019
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6SEG
| Class1: CENP-A nucleosome in complex with CENP-C central region | 分子名称: | DNA (145-MER), Histone H2A type 2-A, Histone H2B type 1-C/E/F/G/I, ... | 著者 | Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. | 登録日 | 2019-07-30 | 公開日 | 2019-08-14 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
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6SE0
| Class 1 : CENP-A nucleosome | 分子名称: | DNA (145-MER), Histone H2A type 2-A, Histone H2B type 1-C/E/F/G/I, ... | 著者 | Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. | 登録日 | 2019-07-29 | 公開日 | 2019-08-14 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
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6SE6
| Class2 : CENP-A nucleosome in complex with CENP-C central region | 分子名称: | Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... | 著者 | Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. | 登録日 | 2019-07-29 | 公開日 | 2019-08-14 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | 主引用文献 | CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
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6SEE
| Class2A : CENP-A nucleosome in complex with CENP-C central region | 分子名称: | Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... | 著者 | Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. | 登録日 | 2019-07-29 | 公開日 | 2019-08-14 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (4.2 Å) | 主引用文献 | CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
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6SEF
| Class2C : CENP-A nucleosome in complex with CENP-C central region | 分子名称: | Centromere protein C, DNA (145-MER), Histone H2A type 2-A, ... | 著者 | Ali-Ahmad, A, Bilokapic, S, Schafer, I.B, Halic, M, Sekulic, N. | 登録日 | 2019-07-29 | 公開日 | 2019-08-14 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | CENP-C unwraps the human CENP-A nucleosome through the H2A C-terminal tail. Embo Rep., 20, 2019
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6T7A
| Structure of human Sox11 transcription factor in complex with a nucleosome | 分子名称: | DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. | 登録日 | 2019-10-21 | 公開日 | 2020-04-29 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
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6T7B
| Structure of human Sox2 transcription factor in complex with a nucleosome | 分子名称: | DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. | 登録日 | 2019-10-21 | 公開日 | 2020-04-29 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (5.1 Å) | 主引用文献 | Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
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6T79
| Structure of a human nucleosome at 3.2 A resolution | 分子名称: | DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. | 登録日 | 2019-10-21 | 公開日 | 2020-04-29 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | 主引用文献 | Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
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6TEM
| CENP-A nucleosome core particle with 145 base pairs of the Widom 601 sequence by cryo-EM | 分子名称: | Histone H2A, Histone H2B 1.1, Histone H3-like centromeric protein A, ... | 著者 | Boopathi, R, Danev, R, Petosa, C, Bednar, J. | 登録日 | 2019-11-12 | 公開日 | 2020-04-08 | 最終更新日 | 2024-05-15 | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | 主引用文献 | Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends. Nucleic Acids Res., 48, 2020
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6T7D
| Structure of human Sox11 transcription factor in complex with a nucleosome | 分子名称: | DNA (151-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. | 登録日 | 2019-10-21 | 公開日 | 2020-04-29 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (4.4 Å) | 主引用文献 | Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
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6T7C
| Structure of two copies of human Sox11 transcription factor in complex with a nucleosome | 分子名称: | DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. | 登録日 | 2019-10-21 | 公開日 | 2020-04-29 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (4 Å) | 主引用文献 | Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
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6T93
| Nucleosome with OCT4-SOX2 motif at SHL-6 | 分子名称: | DNA (153-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Michael, A.K, Kempf, G, Cavadini, S, Bunker, R.D, Thoma, N.H. | 登録日 | 2019-10-25 | 公開日 | 2020-05-06 | 最終更新日 | 2024-05-22 | 実験手法 | ELECTRON MICROSCOPY (3.49 Å) | 主引用文献 | Mechanisms of OCT4-SOX2 motif readout on nucleosomes. Science, 368, 2020
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6T9L
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6UH5
| Structural basis of COMPASS eCM recognition of the H2Bub nucleosome | 分子名称: | Bre2, DNA (146-MER), H3 N-terminus, ... | 著者 | Hsu, P.L, Shi, H, Zheng, N. | 登録日 | 2019-09-26 | 公開日 | 2019-11-20 | 最終更新日 | 2019-12-18 | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | 主引用文献 | Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS. Mol.Cell, 76, 2019
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6UGM
| Structural basis of COMPASS eCM recognition of an unmodified nucleosome | 分子名称: | Bre2, DNA (146-MER), H3 N-terminus, ... | 著者 | Hsu, P.L, Shi, H, Zheng, N. | 登録日 | 2019-09-26 | 公開日 | 2019-11-20 | 最終更新日 | 2024-03-20 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS. Mol.Cell, 76, 2019
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6UPH
| Structure of a Yeast Centromeric Nucleosome at 2.7 Angstrom resolution | 分子名称: | DNA (119-MER), Histone H2A, Histone H2B.1, ... | 著者 | Migl, D, Kschonsak, M, Arthur, C.P, Khin, Y, Harrison, S.C, Ciferri, C, Dimitrova, Y.N. | 登録日 | 2019-10-17 | 公開日 | 2019-11-06 | 最終更新日 | 2024-05-15 | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | 主引用文献 | Cryoelectron Microscopy Structure of a Yeast Centromeric Nucleosome at 2.7 angstrom Resolution. Structure, 28, 2020
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