PDB: 372 resultsInfo pagesStatus searchChemie searchBIRD

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3H3U	Crystal structure of CRP (cAMP receptor Protein) from Mycobacterium tuberculosis Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY CRP/FNR-FAMILY), SULFATE ION Authors: Kumar, P, Joshi, D.C, Akif, M, Akhter, Y, Hasnain, S.E, Mande, S.C. Deposit date: 2009-04-17 Release date: 2010-02-02 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Mapping conformational transitions in cyclic AMP receptor protein: crystal structure and normal-mode analysis of Mycobacterium tuberculosis apo-cAMP receptor protein Biophys.J., 98, 2010
3N4M	E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, DI(HYDROXYETHYL)ETHER, ... Authors: Lara-Gonzalez, S, Birktoft, J.J, Lawson, C.L. Deposit date: 2010-05-21 Release date: 2011-05-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.987 Å) Cite: The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element. Biochemistry, 59, 2020
3H3Z	Crystal structure of a putative cyclic nucleotide binding protein (spoa0323) from ruegeria pomeroyi dss-3 at 2.35 A resolution Descriptor: CHLORIDE ION, Cyclic nucleotide-binding protein Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-04-17 Release date: 2009-05-05 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of PUTATIVE CAMP-BINDING REGULATORY PROTEIN (YP_165150.1) from SILICIBACTER POMEROYI DSS-3 at 2.35 A resolution To be published
3MZH	Crystal structure of cAMP receptor protein from mycobacterium tuberculosis in complex with cAMP and its DNA binding element Descriptor: 5'-D(P*AP*AP*AP*TP*GP*TP*GP*AP*TP*CP*TP*AP*GP*GP*TP*CP*AP*CP*GP*TP*G)-3', 5'-D(P*CP*AP*CP*GP*TP*GP*AP*CP*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*C)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ... Authors: Akhter, Y, Wilmanns, M. Deposit date: 2010-05-12 Release date: 2011-06-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal Structure of Camp Receptor Protein from Mycobacterium Tuberculosis in Complex with DNA and cAMP To be Published
3HIF	The crystal structure of apo wild type CAP at 3.6 A resolution. Descriptor: Catabolite gene activator Authors: Steitz, T.A, Sharma, H, Wang, J, Kong, J, Yu, S. Deposit date: 2009-05-19 Release date: 2009-09-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.59 Å) Cite: Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding. Proc.Natl.Acad.Sci.USA, 106, 2009
3I59	Crystal structure of MtbCRP in complex with N6-cAMP Descriptor: (2R)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate, (2S)-N6-(1-Methyl-2-phenylethyl)adenosine-3',5'-cyclic monophosphate, CHLORIDE ION, ... Authors: Reddy, M.C, Palaninathan, S.K, Bruning, J.B, Thurman, C, Smith, D, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC) Deposit date: 2009-07-03 Release date: 2009-09-08 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.29 Å) Cite: Structural Insights into the Mechanism of the Allosteric Transitions of Mycobacterium tuberculosis cAMP Receptor Protein. J.Biol.Chem., 284, 2009
3I54	Crystal structure of MtbCRP in complex with cAMP Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Transcriptional regulator, Crp/Fnr family Authors: Reddy, M.C, Palaninathan, S.K, Bruning, J.B, Thurman, C, Smith, D, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC) Deposit date: 2009-07-03 Release date: 2009-09-08 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural Insights into the Mechanism of the Allosteric Transitions of Mycobacterium tuberculosis cAMP Receptor Protein. J.Biol.Chem., 284, 2009
3IDB	Crystal structure of (108-268)RIIb:C holoenzyme of cAMP-dependent protein kinase Descriptor: MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Brown, S.H.J, Wu, J, Kim, C, Alberto, K, Taylor, S.S. Deposit date: 2009-07-20 Release date: 2009-09-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Novel isoform-specific interfaces revealed by PKA RIIbeta holoenzyme structures. J.Mol.Biol., 393, 2009
3IDC	Crystal structure of (102-265)RIIb:C holoenzyme of cAMP-dependent protein kinase Descriptor: MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Brown, S.H.J, Wu, J, Kim, C, Alberto, K, Taylor, S.S. Deposit date: 2009-07-20 Release date: 2009-09-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Novel isoform-specific interfaces revealed by PKA RIIbeta holoenzyme structures. J.Mol.Biol., 393, 2009
3IWZ	The c-di-GMP Responsive Global Regulator CLP Links Cell-Cell Signaling to Virulence Gene Expression in Xanthomonas campestris Descriptor: Catabolite activation-like protein Authors: Chin, K.H, Tu, Z.L, Tseng, Y.H, Dow, J.M, Wang, A.H.J, Chou, S.H. Deposit date: 2009-09-03 Release date: 2009-12-15 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris. J.Mol.Biol., 396, 2010
3IYD	Three-dimensional EM structure of an intact activator-dependent transcription initiation complex Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, DNA (98-MER), ... Authors: Hudson, B.P, Quispe, J, Lara, S, Kim, Y, Berman, H, Arnold, E, Ebright, R.H, Lawson, C.L. Deposit date: 2009-08-01 Release date: 2009-11-10 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (19.799999 Å) Cite: Three-dimensional EM structure of an intact activator-dependent transcription initiation complex Proc.Natl.Acad.Sci.USA, 106, 2009
3J4Q	Pseudo-atomic model of the AKAP18-PKA complex in a bent conformation derived from electron microscopy Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit Authors: Reichow, S.L, Gonen, T. Deposit date: 2013-09-25 Release date: 2013-11-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (35 Å) Cite: Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
3J4R	Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit Authors: Reichow, S.L, Gonen, T. Deposit date: 2013-09-25 Release date: 2013-11-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (35 Å) Cite: Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
3KCC	Crystal structure of D138L mutant of Catabolite Gene Activator Protein Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Tao, W.B, Gao, Z.Q, Zhou, J.H, Dong, Y.H, Yu, S.N. Deposit date: 2009-10-21 Release date: 2009-11-17 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.66 Å) Cite: The 1.6A resolution structure of activated D138L mutant of catabolite gene activator protein with two cAMP bound in each monomer Int.J.Biol.Macromol., 48, 2011
3PVB	Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase Descriptor: GLYCEROL, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Boettcher, A.J, Wu, J, Kim, C, Yang, J, Bruystens, J, Cheung, N, Pennypacker, J.K, Blumenthal, D.A, Kornev, A.P, Taylor, S.S. Deposit date: 2010-12-06 Release date: 2011-02-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Crystal structure of (73-244)RIa:C holoenzyme of cAMP-dependent Protein kinase Structure, 19, 2011
3QOP	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, GLYCEROL Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-02-10 Release date: 2012-04-04 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Camp Receptor Protein (Crp) To be Published
3LA7	Crystal structure of NtcA in apo-form Descriptor: Global nitrogen regulator, octyl beta-D-glucopyranoside Authors: Zhao, M.X, Jiang, Y.L, He, Y.X, Chen, Y.F, Teng, Y.B, Zhang, C.C, Chen, Y.X, Zhou, C.Z. Deposit date: 2010-01-06 Release date: 2010-09-01 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for the allosteric control of the global transcription factor NtcA by the nitrogen starvation signal 2-oxoglutarate. Proc.Natl.Acad.Sci.USA, 107, 2010
3ROU	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-04-26 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3R6S	Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, HEXANE-1,6-DIOL, transcription regulator Authors: Jungwirth, B, Pojer, F. Deposit date: 2011-03-22 Release date: 2012-03-28 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP To be Published
3RPQ	Domain-domain flexibility leads to allostery within the camp receptor protein (CRP) Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator, PHOSPHATE ION Authors: Knapp, J, White, M.A, Lee, J.C. Deposit date: 2011-04-27 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.61 Å) Cite: Domain-Domain Flexibility Leads to Allostery within the Cam Receptor Protein (Crp) To be Published
3B02	Crystal structure of TTHB099, a transcriptional regulator CRP family from Thermus thermophilus HB8 Descriptor: Transcriptional regulator, Crp family Authors: Agari, Y, Kuramitsu, S, Shinkai, A, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2011-06-03 Release date: 2011-06-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.92 Å) Cite: X-ray crystal structure of TTHB099, a CRP/FNR superfamily transcriptional regulator from Thermus thermophilus HB8, reveals a DNA-binding protein with no required allosteric effector molecule Proteins, 80, 2012
3BEH	Structure of a Bacterial Cyclic Nucleotide Regulated Ion Channel Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Mll3241 protein, POTASSIUM ION Authors: Clayton, G.M, Morais-Cabral, J.H. Deposit date: 2007-11-18 Release date: 2008-01-15 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structure of the transmembrane regions of a bacterial cyclic nucleotide-regulated channel. Proc.Natl.Acad.Sci.USA, 105, 2008
3D0S	cAMP receptor protein from m.tuberculosis, cAMP-free form Descriptor: CHLORIDE ION, TRANSCRIPTIONAL REGULATORY PROTEIN Authors: Gallagher, D.T, Robinson, H, Reddy, P.T. Deposit date: 2008-05-02 Release date: 2009-02-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of cAMP receptor protein from M. tuberculosis in the unliganded form To be Published
3DKW	Crystal Structure of DNR from Pseudomonas aeruginosa. Descriptor: DNR protein Authors: Giardina, G. Deposit date: 2008-06-26 Release date: 2009-05-19 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.6 Å) Cite: A dramatic conformational rearrangement is necessary for the activation of DNR from Pseudomonas aeruginosa. Crystal structure of wild-type DNR. Proteins, 2009
3DV8	Crystal structure of a putative transcriptional regulator of the crp/fnr family (eubrec_1222) from eubacterium rectale atcc 33656 at 2.55 A resolution Descriptor: transcriptional regulator, Crp/Fnr family Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-07-18 Release date: 2008-08-05 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Crystal structure of transcriptional regulator, Crp/Fnr family (RER070207001219) from Eubacterium rectale at 2.55 A resolution To be published

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