PDB: 44643 resultsInfo pagesStatus searchChemie searchBIRD

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6NUU	Structure of Calcineurin mutant in complex with NHE1 peptide Descriptor: CALCIUM ION, Calcineurin subunit B type 1, DI(HYDROXYETHYL)ETHER, ... Authors: Wang, X, Page, R, Peti, W. Deposit date: 2019-02-02 Release date: 2019-07-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Molecular basis for the binding and selective dephosphorylation of Na+/H+exchanger 1 by calcineurin. Nat Commun, 10, 2019
5Y4O	Cryo-EM structure of MscS channel, YnaI Descriptor: Low conductance mechanosensitive channel YnaI Authors: Zhang, Y, Yu, J. Deposit date: 2017-08-04 Release date: 2019-03-20 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: A binding-block ion selective mechanism revealed by a Na/K selective channel. Protein Cell, 9, 2018
3GB7	Potassium Channel KcsA-Fab complex in Li+ Descriptor: DIACYL GLYCEROL, NICKEL (II) ION, Voltage-gated potassium channel, ... Authors: Thompson, A.N, Ilsoo, K, Panosian, T.D, Iverson, T.M, Allen, T.W, Nimigean, C.M. Deposit date: 2009-02-18 Release date: 2009-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Mechanism of potassium-channel selectivity revealed by Na(+) and Li(+) binding sites within the KcsA pore. Nat.Struct.Mol.Biol., 16, 2009
4IB0	X-ray Structure of cAMP dependent protein kinase A in complex with high Na+ concentration, ADP and phosphorylated peptide pSP20 Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Gerlits, O, Kovalevsky, A. Deposit date: 2012-12-07 Release date: 2013-12-11 Last modified: 2014-05-28 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Metal-Free cAMP-Dependent Protein Kinase Can Catalyze Phosphoryl Transfer. Biochemistry, 53, 2014
2NX9	Crystal structure of the carboxyltransferase domain of the oxaloacetate decarboxylase Na+ pump from Vibrio cholerae Descriptor: Oxaloacetate decarboxylase 2, subunit alpha, ZINC ION Authors: Studer, R, Dimroth, P. Deposit date: 2006-11-17 Release date: 2006-12-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of the Carboxyltransferase Domain of the Oxaloacetate Decarboxylase Na(+) Pump from Vibrio cholerae. J.Mol.Biol., 367, 2007
3X3B	Crystal structure of the light-driven sodium pump KR2 in acidic state Descriptor: DI(HYDROXYETHYL)ETHER, OLEIC ACID, RETINAL, ... Authors: Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O. Deposit date: 2015-01-18 Release date: 2015-04-08 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump Nature, 521, 2015
3X3C	Crystal structure of the light-driven sodium pump KR2 in neutral state Descriptor: OLEIC ACID, RETINAL, Sodium pumping rhodopsin Authors: Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O. Deposit date: 2015-01-18 Release date: 2015-04-08 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump Nature, 521, 2015
5IP5	Human DJ-1 complexed with Na-K-tartrate Descriptor: L(+)-TARTARIC ACID, Protein deglycase DJ-1 Authors: Lee, S, Cha, S.-S, An, Y.J. Deposit date: 2016-03-09 Release date: 2017-03-15 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Human DJ-1 complexed with Na-K-tartrate To Be Published
3E89	Crystal Structure of the the open NaK channel-low Na+ complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CESIUM ION, Potassium channel protein, ... Authors: Jiang, Y, Alam, A. Deposit date: 2008-08-19 Release date: 2008-12-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural analysis of ion selectivity in the NaK channel Nat.Struct.Mol.Biol., 16, 2009
3E8G	Crystal Structure of the the open NaK channel-Na+/Ca2+ complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CESIUM ION, ... Authors: Jiang, Y, Alam, A. Deposit date: 2008-08-19 Release date: 2008-12-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural analysis of ion selectivity in the NaK channel Nat.Struct.Mol.Biol., 16, 2009
7W77	cryo-EM structure of human NaV1.3/beta1/beta2-bulleyaconitineA Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Jiang, D, Li, X. Deposit date: 2021-12-03 Release date: 2022-04-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structural basis for modulation of human Na V 1.3 by clinical drug and selective antagonist. Nat Commun, 13, 2022
7W7F	Cryo-EM structure of human NaV1.3/beta1/beta2-ICA121431 Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2,2-diphenyl-~{N}-[4-(1,3-thiazol-2-ylsulfamoyl)phenyl]ethanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Jiang, D, Li, X. Deposit date: 2021-12-04 Release date: 2022-04-06 Method: ELECTRON MICROSCOPY (3.35 Å) Cite: Structural basis for modulation of human Na V 1.3 by clinical drug and selective antagonist. Nat Commun, 13, 2022
5MV2	Crystal structure of the E protein of the Japanese encephalitis live attenuated vaccine virus Descriptor: E protein Authors: Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J. Deposit date: 2017-01-14 Release date: 2018-05-23 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism. Protein Cell, 10, 2019
7Y3E	Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state Descriptor: HEXADECANE, Sodium/hydrogen exchanger 7 Authors: Wang, Y, Zhao, Y, Gao, Y. Deposit date: 2022-06-10 Release date: 2023-08-09 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Architecture and autoinhibitory mechanism of the plasma membrane Na + /H + antiporter SOS1 in Arabidopsis. Nat Commun, 14, 2023
7NGH	Structure of glutamate transporter homologue in complex with Sybody Descriptor: ASPARTIC ACID, Proton/glutamate symporter, SDF family, ... Authors: Arkhipova, V, Slotboom, D.J, Guskov, A. Deposit date: 2021-02-09 Release date: 2021-09-15 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Kinetic mechanism of Na + -coupled aspartate transport catalyzed by Glt Tk . Commun Biol, 4, 2021
8H2D	The hypothetical protein from Mycobacterium tuberculosis mutant - E47A Descriptor: Uncharacterized protein Rv1546 Authors: Kim, D.H, Na, Y, Lee, B.J. Deposit date: 2022-10-05 Release date: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis. Protein Sci., 32, 2023
8H0H	Hypotethical protein from Mycobacterium tuberculsosis Descriptor: Uncharacterized protein Rv1546 Authors: Kim, D.H, Na, Y, Lee, B.J. Deposit date: 2022-09-29 Release date: 2023-09-06 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis. Protein Sci., 32, 2023
2LT9	The solution structure of Ca2+ binding domain 2B of the third isoform of the Na+/Ca2+ exchanger Descriptor: Protein Slc8a3 Authors: Breukels, V, Touw, W.G, Vuister, G.W. Deposit date: 2012-05-15 Release date: 2012-08-01 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: NMR structure note: solution structure of Ca(2+) binding domain 2B of the third isoform of the Na(+)/Ca (2+) exchanger. J.Biomol.Nmr, 54, 2012
5F1F	Crystal structure of CMY-10 adenylylated by acetyl-AMP Descriptor: ADENOSINE MONOPHOSPHATE, Beta-lactamase, CADMIUM ION Authors: An, Y.J, Kim, M.K, Na, J.H, Cha, S.S. Deposit date: 2015-11-30 Release date: 2016-12-07 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.548 Å) Cite: Structural and mechanistic insights into the inhibition of class C beta-lactamases through the adenylylation of the nucleophilic serine. J.Antimicrob.Chemother., 72, 2017
5A1S	Crystal structure of the sodium-dependent citrate symporter SeCitS form Salmonella enterica. Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CITRATE ANION, ... Authors: Woehlert, D, Groetzinger, M.J, Kuhlbrandt, W, Yildiz, O. Deposit date: 2015-05-05 Release date: 2016-02-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Mechanism of Na(+)-dependent citrate transport from the structure of an asymmetrical CitS dimer. Elife, 4, 2015
7WEL	Human Nav1.8 with A-803467, class II Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-23 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WFR	Human Nav1.8 with A-803467, class III Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-27 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WFW	Apo human Nav1.8 Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-27 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
7WE4	Human Nav1.8 with A-803467, class I Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yan, N, Pan, X.J, Huang, X.S, Huang, G.X. Deposit date: 2021-12-22 Release date: 2022-08-03 Last modified: 2022-09-21 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8. Proc.Natl.Acad.Sci.USA, 119, 2022
1HXF	HUMAN THROMBIN COMPLEX WITH HIRUDIN VARIANT Descriptor: HIRUDIN VARIANT, THROMBIN Authors: Tulinsky, A, Zhang, E. Deposit date: 1996-09-09 Release date: 1997-01-27 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The molecular environment of the Na+ binding site of thrombin. Biophys.Chem., 63, 1997

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