PDB: 1081 resultsInfo pagesStatus searchChemie searchBIRD

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8IMX	Cryo-EM structure of GPI-T with a chimeric GPI-anchored protein Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Xu, Y, Li, T, Qu, Q, Li, D. Deposit date: 2023-03-07 Release date: 2023-08-16 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (2.85 Å) Cite: Structures of liganded glycosylphosphatidylinositol transamidase illuminate GPI-AP biogenesis. Nat Commun, 14, 2023
7YV3	genetically encoded pH sensor Lime at pH10 Descriptor: Lime Authors: Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J. Deposit date: 2022-08-18 Release date: 2023-08-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin. ACS Sens, 8, 2023
7YV5	genetically encoded pH sensor Lime at pH6 Descriptor: Lime Authors: Wen, Y, Shen, Y, Campbell, R, Lemieux, M.J. Deposit date: 2022-08-18 Release date: 2023-08-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin. ACS Sens, 8, 2023
8AM4	Cl-rsEGFP2 Long Wavelength Structure Descriptor: Green fluorescent protein Authors: Orr, C.M, Fadini, A, van Thor, J. Deposit date: 2022-08-02 Release date: 2023-08-02 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 2023
8B6T	X-ray structure of the interface optimized haloalkane dehalogenase HaloTag7 fusion to the green fluorescent protein GFP (ChemoG5-TMR) labeled with a chloroalkane tetramethylrhodamine fluorophore substrate Descriptor: CHLORIDE ION, Green fluorescent protein,Haloalkane dehalogenase, [9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium Authors: Tarnawski, M, Hellweg, L, Hiblot, J. Deposit date: 2022-09-27 Release date: 2023-07-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: A general method for the development of multicolor biosensors with large dynamic ranges. Nat.Chem.Biol., 19, 2023
8B6S	X-ray structure of the haloalkane dehalogenase HaloTag7 fusion to the green fluorescent protein GFP (ChemoG1) labeled with a chloroalkane tetramethylrhodamine fluorophore substrate Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein,Haloalkane dehalogenase, ... Authors: Tarnawski, M, Hellweg, L, Hiblot, J. Deposit date: 2022-09-27 Release date: 2023-07-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A general method for the development of multicolor biosensors with large dynamic ranges. Nat.Chem.Biol., 19, 2023
8A6N	Room temperature rsEGFP2 with a chlorinated chromophore 300 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6O	Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6S	Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-19 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8AHB	rsEGFP2 photoswitched to its off-state at room temperature and back-switched to its on-state at 100K Descriptor: Green fluorescent protein, SULFATE ION Authors: Mantovanelli, A, Adam, V. Deposit date: 2022-07-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Photophysical Studies at Cryogenic Temperature Reveal a Novel Photoswitching Mechanism of rsEGFP2. J.Am.Chem.Soc., 145, 2023
8A6P	Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A7V	Room temperature rsEGFP2 in its OFF-state obtained with SFX Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6Q	Room temperature rsEGFP2 with a chlorinated chromophore 5 ps after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8AHA	rsEGFP2 photoswitched to its off-state at 100K Descriptor: Green fluorescent protein, SULFATE ION Authors: Mantovanelli, A, Adam, V. Deposit date: 2022-07-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Photophysical Studies at Cryogenic Temperature Reveal a Novel Photoswitching Mechanism of rsEGFP2. J.Am.Chem.Soc., 145, 2023
8A6R	Room temperature rsEGFP2 with a chlorinated chromophore 100 ps after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6G	Room temperature rsEGFP2 with a chlorinated chromophore in the non-fluorescent OFF-state Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-17 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A83	rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination Descriptor: Green fluorescent protein, SULFATE ION Authors: Fadini, A, van Thor, J, Chang, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
7Y77	Crystal structure of rice NAL1 Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1 Authors: Yan, J.J, Guan, Z.Y, Yin, P, Xiong, L.Z. Deposit date: 2022-06-21 Release date: 2023-07-12 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Serine protease NAL1 exerts pleiotropic functions through degradation of TOPLESS-related corepressor in rice. Nat.Plants, 9, 2023
7QLI	Cis structure of rsKiiro at 290 K Descriptor: GLYCEROL, SULFATE ION, rsKiiro Authors: van Thor, J.J, Baxter, J.M. Deposit date: 2021-12-20 Release date: 2023-07-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.155 Å) Cite: Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
7QLL	rsKiiro Thermal annealing at 290K of 200K Cis intermediate Descriptor: GLYCEROL, SULFATE ION, rsKiiro Authors: van Thor, J.J, Baxter, J.M. Deposit date: 2021-12-20 Release date: 2023-07-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.324 Å) Cite: Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
7QLK	Cis structure intermediate of rsKiiro Illuminated at 200 K Descriptor: GLYCEROL, SULFATE ION, rsKiiro Authors: van Thor, J.J, Baxter, J.M. Deposit date: 2021-12-20 Release date: 2023-07-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.458 Å) Cite: Optical control of ultrafast structural dynamics in a fluorescent protein. Nat.Chem., 15, 2023
8DJ8	Crystal Structure of Calgreen 1 protein Descriptor: Calgreen One Authors: Hung, L.-W, Nguyen, H.B, Waldo, G. Deposit date: 2022-06-30 Release date: 2023-07-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and Function of Engineered Variants of GFP-type Green Fluorescent protein from Corynactis californica (tentative) To Be Published
8DTA	Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide. Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ... Authors: Rosenbaum, J.C, Carlson, A.E. Deposit date: 2022-07-25 Release date: 2023-07-05 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Glutathione modulates metal binding to proteins. TBD
8EYV	Structure of Beetroot dimer bound to DFHO Descriptor: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, POTASSIUM ION, RNA (45-MER) Authors: Passalacqua, L.F.M, Ferre-D'Amare, A.R. Deposit date: 2022-10-28 Release date: 2023-05-31 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture. Nat Commun, 14, 2023
8EYU	Structure of Beetroot dimer bound to DFAME Descriptor: POTASSIUM ION, RNA (49-MER), methyl (2E)-3-{(4Z)-4-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-1-methyl-5-oxo-4,5-dihydro-1H-imidazol-2-yl}prop-2-enoate Authors: Passalacqua, L.F.M, Ferre-D'Amare, A.R. Deposit date: 2022-10-28 Release date: 2023-05-31 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture. Nat Commun, 14, 2023

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