PDB: 5594 件ウェブページステータス検索Chemie searchBIRD

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6WI5	De novo designed protein Foldit4 分子名称: De novo designed protein Foldit4 著者 Bera, A.K, Koepnick, B, Boykov, A, Baker, D. 登録日 2020-04-08 公開日 2020-04-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 De novo design of protein logic gates. Science, 368, 2020
6MSP	De novo Designed Protein Foldit3 分子名称: De novo Designed Protein Foldit3 著者 Liu, G, Ishida, Y, Swapna, G.V.T, Kleinfelter, S, Koepnick, B, Baker, D, Montelione, G.T. 登録日 2018-10-17 公開日 2019-06-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo protein design by citizen scientists. Nature, 570, 2019
7M5T	Solution NMR structure of de novo designed protein 0515 分子名称: De novo designed protein 0515 著者 Ramelot, T.A, Hao, J, Baker, D, Montelione, G.T. 登録日 2021-03-24 公開日 2021-12-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo protein design by deep network hallucination. Nature, 600, 2021
2MQ8	Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414 分子名称: De novo designed protein LFR1 著者 Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2014-06-12 公開日 2014-08-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Control over overall shape and size in de novo designed proteins. Proc.Natl.Acad.Sci.USA, 112, 2015
5KPH	Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR485 分子名称: De novo Beta Sheet Design Protein OR485 著者 Tang, Y, Liu, G, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2016-07-04 公開日 2016-09-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Principles for designing proteins with cavities formed by curved beta sheets. Science, 355, 2017
5KPE	Solution NMR Structure of Denovo Beta Sheet Design Protein, Northeast Structural Genomics Consortium (NESG) Target OR664 分子名称: De novo Beta Sheet Design Protein OR664 著者 Tang, Y, Liu, G, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2016-07-03 公開日 2016-09-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Principles for designing proteins with cavities formed by curved beta sheets. Science, 355, 2017
5WLJ	De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4EH1 分子名称: De Novo Metal Binding Helical Bundle, ZINC ION 著者 Zhang, S.-Q, Liu, L, DeGrado, W.F. 登録日 2017-07-27 公開日 2018-01-03 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles. J. Am. Chem. Soc., 140, 2018
8TN6	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo rucaparib 分子名称: De novo designed protein, Rucaparib 著者 Lu, L, DeGrado, W.F. 登録日 2023-08-01 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TN1	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - apo 分子名称: De novo designed 4 helix bundles, SULFATE ION 著者 Lu, L, DeGrado, W.F. 登録日 2023-08-01 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8HDU	De novo design cavitated protein without predefined topology 分子名称: De novo design cavitated protein 著者 Hu, X, Xu, Y. 登録日 2022-11-06 公開日 2023-01-18 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 De novo design of cavity-containing proteins with a backbone-centered neural network energy function. Structure, 32, 2024
8HDV	De novo design cavitated protein without predefined topology 分子名称: De novo design cavitated protein 著者 Hu, X, Xu, Y. 登録日 2022-11-06 公開日 2023-01-18 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 De novo design of cavity-containing proteins with a backbone-centered neural network energy function. Structure, 32, 2024
7SKN	De novo synthetic protein DIG8-CC (tetragonal space group) 分子名称: De novo synthetic protein DIG8-CC 著者 Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X. 登録日 2021-10-21 公開日 2022-10-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 De novo design of immunoglobulin-like domains Nat Commun, 13, 2022
7SKO	De novo synthetic protein DIG8-CC (orthogonal space group) 分子名称: De novo synthetic protein DIG8-CC, MAGNESIUM ION 著者 Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X. 登録日 2021-10-21 公開日 2022-10-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 De novo design of immunoglobulin-like domains Nat Commun, 13, 2022
7SKP	De novo synthetic protein DIG14 (tetragonal space group) 分子名称: De novo synthetic protein DIG14 著者 Mendes, S.R, Eckhard, U, Marcos, E, Gomis-Ruth, F.X. 登録日 2021-10-21 公開日 2022-10-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 De novo design of immunoglobulin-like domains Nat Commun, 13, 2022
5YXI	Designed protein dRafX6 分子名称: Designed protein dRafX6 著者 Liu, R. 登録日 2017-12-05 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo sequence redesign of a functional Ras-binding domain globally inverted the surface charge distribution and led to extreme thermostability. Biotechnol.Bioeng., 118, 2021
8TNB	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo mefuparib 分子名称: 5-fluoro-2-{4-[(methylamino)methyl]phenyl}-1-benzofuran-7-carboxamide, De novo designed protein 著者 Lu, L, DeGrado, W.F. 登録日 2023-08-01 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TND	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo veliparib 分子名称: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, De novo designed protein, SULFATE ION 著者 Lu, L, DeGrado, W.F. 登録日 2023-08-01 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TNC	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo niraparib 分子名称: 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide, De novo designed protein 著者 Lu, L, DeGrado, W.F. 登録日 2023-08-01 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
6MRR	De novo designed protein Foldit1 分子名称: Foldit1 著者 Koepnick, B, Bick, M.J, Estep, R.D, Kleinfelter, S, Wei, L, Baker, D. 登録日 2018-10-15 公開日 2019-06-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 De novo protein design by citizen scientists. Nature, 570, 2019
6MRS	De novo designed protein Peak6 分子名称: Peak6, SULFATE ION 著者 Koepnick, B, Boykov, A, Baker, D. 登録日 2018-10-15 公開日 2019-06-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.541 Å) 主引用文献 De novo protein design by citizen scientists. Nature, 570, 2019
7CBC	Crystal structure of a de novo designed switch protein caging a hemagglutinin binder 分子名称: De novo designed switch protein caging a hemagglutinin binder (sCageHA267_1S), ETHANOL 著者 Lee, H, Oh, B.-H, Baker, D. 登録日 2020-06-11 公開日 2020-12-23 最終更新日 2021-03-31 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 De novo design of modular and tunable protein biosensors. Nature, 591, 2021
1PBZ	DE NOVO DESIGNED PEPTIDE-METALLOPORPHYRIN COMPLEX, SOLUTION STRUCTURE 分子名称: COPROPORPHYRIN I CONTAINING CO(III), De novo designed cyclic peptide 著者 Wang, J, Rosenblatt, M.M, Suslick, K.S. 登録日 2003-05-15 公開日 2003-12-09 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 De novo designed cyclic-peptide heme complexes Proc.Natl.Acad.Sci.USA, 100, 2003
7UWZ	NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3 分子名称: De novo designed small beta-barrel protein 33_bp_sh3 著者 Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. 登録日 2022-05-04 公開日 2023-03-22 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
7UWY	NMR solution structure of the De novo designed small beta-barrel protein 29_bp_sh3 分子名称: De novo designed small beta-barrel protein 29_bp_sh3 著者 Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. 登録日 2022-05-04 公開日 2023-03-22 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
6X1K	Solution NMR structure of de novo designed TMB2.3 分子名称: De novo designed transmembrane beta-barrel TMB2.3 著者 Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K. 登録日 2020-05-19 公開日 2021-02-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 De novo design of transmembrane beta barrels. Science, 371, 2021

 

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