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3ZSG
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BU of 3zsg by Molmil
X-ray structure of p38alpha bound to TAK-715
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE 14, TAK-715, octyl beta-D-glucopyranoside
Authors:Azevedo, R, van Zeeland, M, Raaijmakers, H, Kazemier, B, Oubrie, A.
Deposit date:2011-06-28
Release date:2012-06-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:X-ray structure of p38 alpha bound to TAK-715: comparison with three classic inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
4FIT
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BU of 4fit by Molmil
FHIT-APO
Descriptor: FRAGILE HISTIDINE TRIAD PROTEIN
Authors:Lima, C.D, Klein, M.G, Hendrickson, W.A.
Deposit date:1997-09-25
Release date:1998-03-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based analysis of catalysis and substrate definition in the HIT protein family.
Science, 278, 1997
5DOU
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BU of 5dou by Molmil
Crystal Structure of Human Carbamoyl phosphate synthetase I (CPS1), ligand-bound form
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:de Cima, S, Polo, L.M, Fita, I, Rubio, V.
Deposit date:2015-09-11
Release date:2015-12-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of human carbamoyl phosphate synthetase: deciphering the on/off switch of human ureagenesis.
Sci Rep, 5, 2015
3WKH
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BU of 3wkh by Molmil
Crystal structure of cellobiose 2-epimerase in complex with epilactose
Descriptor: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION, ...
Authors:Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
Deposit date:2013-10-21
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
1KKB
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BU of 1kkb by Molmil
Complex of Escherichia coli Adenylosuccinate Synthetase with IMP and Hadacidin
Descriptor: Adenylosuccinate Synthetase, HADACIDIN, INOSINIC ACID
Authors:Hou, Z, Wang, W, Fromm, H.J, Honzatko, R.B.
Deposit date:2001-12-06
Release date:2002-03-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:IMP Alone Organizes the Active Site of Adenylosuccinate Synthetase from Escherichia coli.
J.Biol.Chem., 277, 2002
2RC1
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BU of 2rc1 by Molmil
Cytochrome C Peroxidase W191G in complex with 2,4,5-trimethyl-3-oxazoline
Descriptor: (2R,4R,5R)-2,4,5-trimethyl-1,3-oxazolidine, Cytochrome C Peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
2RBU
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BU of 2rbu by Molmil
Cytochrome C Peroxidase in complex with cyclopentane-carboximidamide
Descriptor: Cytochrome C Peroxidase, PROTOPORPHYRIN IX CONTAINING FE, cyclopentanecarboximidamide
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
2RC0
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BU of 2rc0 by Molmil
Cytochrome C Peroxidase W191G in complex with 2-imino-4-methylpiperdine
Descriptor: (4S)-4-methyl-1,4,5,6-tetrahydropyridin-2-amine, Cytochrome C Peroxidase, PHOSPHATE ION, ...
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
2RBT
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BU of 2rbt by Molmil
n-methylbenzylamine in complex with Cytochrome C Peroxidase W191G
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cytochrome C Peroxidase, N-methyl-1-phenylmethanamine, ...
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
1KKF
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BU of 1kkf by Molmil
Complex of E. coli Adenylosuccinate Synthetase with IMP, Hadacidin, Pyrophosphate, and Mg
Descriptor: Adenylosuccinate Synthetase, DIPHOSPHATE, HADACIDIN, ...
Authors:Hou, Z, Wang, W, Fromm, H.J, Honzatko, R.B.
Deposit date:2001-12-07
Release date:2002-03-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:IMP Alone Organizes the Active Site of Adenylosuccinate Synthetase from Escherichia coli.
J.Biol.Chem., 277, 2002
2A4M
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BU of 2a4m by Molmil
Structure of Trprs II bound to ATP
Descriptor: TRYPTOPHAN, Tryptophanyl-tRNA synthetase II
Authors:Buddha, M.R, Crane, B.R.
Deposit date:2005-06-29
Release date:2005-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Tryptophanyl-tRNA Synthetase II from Deinococcus radiodurans Bound to ATP and Tryptophan: Insight into subunit cooperativity and domain motions linked to catalysis
J.Biol.Chem., 280, 2005
1KJX
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BU of 1kjx by Molmil
IMP Complex of E. Coli Adenylosuccinate Synthetase
Descriptor: Adenylosuccinate Synthetase, INOSINIC ACID
Authors:Hou, Z, Wang, W, Fromm, H.J, Honzatko, R.B.
Deposit date:2001-12-05
Release date:2002-03-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:IMP Alone Organizes the Active Site of Adenylosuccinate Synthetase from Escherichia coli.
J.Biol.Chem., 277, 2002
2FJZ
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BU of 2fjz by Molmil
Structure of the Alzheimer's Amyloid Precursor Protein (APP) copper binding domain (residues 133 to 189) in 'small unit cell' form, metal-free
Descriptor: Amyloid beta A4 protein precursor
Authors:Kong, G.K.-W, Parker, M.W.
Deposit date:2006-01-03
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural Studies of the Alzheimer's Amyloid Precursor Protein Copper-binding Domain Reveal How it Binds Copper Ions
J.Mol.Biol., 367, 2007
4N8G
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BU of 4n8g by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0660), Target EFI-501075, with bound D-alanine-D-alanine
Descriptor: CHLORIDE ION, D-ALANINE, SULFATE ION, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-10-17
Release date:2013-10-30
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
8BX5
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BU of 8bx5 by Molmil
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (dataset 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine receptor
Authors:De Gieter, S, Efremov, R.G, Ulens, C.
Deposit date:2022-12-07
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Sterol derivative binding to the orthosteric site causes conformational changes in an invertebrate Cys-loop receptor.
Elife, 12, 2023
8BXD
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BU of 8bxd by Molmil
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_LMNG_Serotonin dataset 4)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine receptor
Authors:De Gieter, S, Efremov, R.G, Ulens, C.
Deposit date:2022-12-08
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Sterol derivative binding to the orthosteric site causes conformational changes in an invertebrate Cys-loop receptor.
Elife, 12, 2023
8BXF
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BU of 8bxf by Molmil
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_apo, dataset 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine receptor
Authors:De Gieter, S, Efremov, R.G, Ulens, C.
Deposit date:2022-12-08
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Sterol derivative binding to the orthosteric site causes conformational changes in an invertebrate Cys-loop receptor.
Elife, 12, 2023
8BF6
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BU of 8bf6 by Molmil
X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - azotochelin complex
Descriptor: ABC transporter, Azotochelin, FE (III) ION, ...
Authors:Wilson, K.S, Duhme-Klair, A.-K, Blagova, E.V, Miller, A, Booth, R, Dodson, E.J.
Deposit date:2022-10-24
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.969 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
2PS7
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BU of 2ps7 by Molmil
Y295F trichodiene synthase
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Trichodiene synthase
Authors:Vedula, L.S, Cane, D.E, Christianson, D.W.
Deposit date:2007-05-04
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and mechanistic analysis of trichodiene synthase using site-directed mutagenesis: probing the catalytic function of tyrosine-295 and the asparagine-225/serine-229/glutamate-233-Mg2+B motif.
Arch.Biochem.Biophys., 469, 2008
8BXE
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BU of 8bxe by Molmil
Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_comb dataset 3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine receptor
Authors:De Gieter, S, Efremov, R.G, Ulens, C.
Deposit date:2022-12-08
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Sterol derivative binding to the orthosteric site causes conformational changes in an invertebrate Cys-loop receptor.
Elife, 12, 2023
8BJ9
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BU of 8bj9 by Molmil
X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - 5LICAM complex.
Descriptor: ABC transporter, FE (III) ION, N,N'-pentane-1,5-diylbis(2,3-dihydroxybenzamide), ...
Authors:Blagova, E.V, Bennett, M, Booth, R, Dodson, E.J, Duhme-KLair, A.-K, Wilson, K.S.
Deposit date:2022-11-03
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.069 Å)
Cite:Thermostable homologues of the periplasmic siderophore-binding protein CeuE from Geobacillus stearothermophilus and Parageobacillus thermoglucosidasius.
Acta Crystallogr D Struct Biol, 79, 2023
4NGU
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BU of 4ngu by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio alaskensis G20 (Dde_1548), Target EFI-510103, with bound D-Ala-D-Ala
Descriptor: CHLORIDE ION, D-ALANINE, SULFATE ION, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-11-02
Release date:2013-12-04
Last modified:2015-02-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
2PP9
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BU of 2pp9 by Molmil
Nitrate bound wild type oxidized AfNiR
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
Authors:Murphy, M.E.P, Tocheva, E.I.
Deposit date:2007-04-28
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conserved active site residues limit inhibition of a copper-containing nitrite reductase by small molecules.
Biochemistry, 47, 2008
6ZU6
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BU of 6zu6 by Molmil
Cu nitrite reductase from Achromobacter cycloclastes: MSOX series at 170K, dose point 1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, MALONATE ION, ...
Authors:Hough, M.A, Antonyuk, S.V, Strange, R.W, Hasnain, S.S.
Deposit date:2020-07-21
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Nature of the copper-nitrosyl intermediates of copper nitrite reductases during catalysis.
Chem Sci, 11, 2020
6ZUB
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BU of 6zub by Molmil
Cu nitrite reductase from Achromobacter cycloclastes: MSOX series at 170K, dose point 2
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, MALONATE ION, ...
Authors:Hough, M.A, Antonyuk, S.V, Strange, R.W, Hasnain, S.S.
Deposit date:2020-07-22
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Nature of the copper-nitrosyl intermediates of copper nitrite reductases during catalysis.
Chem Sci, 11, 2020

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