PDB: 98331 resultsInfo pagesStatus searchChemie searchBIRD

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6I7T	eIF2B:eIF2 complex Descriptor: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... Authors: Adomavicius, T, Guaita, M, Roseman, A.M, Pavitt, G.D. Deposit date: 2018-11-17 Release date: 2019-05-22 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.61 Å) Cite: The structural basis of translational control by eIF2 phosphorylation. Nat Commun, 10, 2019
5NVK	Crystal structure of the human 4EHP-GIGYF1 complex Descriptor: Eukaryotic translation initiation factor 4E type 2, GRB10-interacting GYF protein 1 Authors: Peter, D, Valkov, E. Deposit date: 2017-05-04 Release date: 2017-07-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.9 Å) Cite: GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression. Genes Dev., 31, 2017
5NVL	Crystal structure of the human 4EHP-GIGYF2 complex Descriptor: Eukaryotic translation initiation factor 4E type 2, GRB10-interacting GYF protein 2 Authors: Peter, D, Valkov, E. Deposit date: 2017-05-04 Release date: 2017-07-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.3 Å) Cite: GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression. Genes Dev., 31, 2017
5WPJ	Structure of the class II 3-hydroxy-3-methylglutaryl-CoA reductase from Streptococcus pneumoniae bound to NADPH in open conformations Descriptor: 3-hydroxy-3-methylglutaryl coenzyme A reductase, GLYCEROL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Miller, B.R, Kung, Y. Deposit date: 2017-08-04 Release date: 2018-04-25 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Features and Domain Movements Controlling Substrate Binding and Cofactor Specificity in Class II HMG-CoA Reductase. Biochemistry, 57, 2018
3WBK	crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex Descriptor: Eukaryotic translation initiation factor 1A, Eukaryotic translation initiation factor 5B Authors: Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M. Deposit date: 2013-05-20 Release date: 2014-11-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.3 Å) Cite: X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A Acta Crystallogr.,Sect.D, 70, 2014
6HB3	Structure of Hgh1, crystal form II Descriptor: Protein HGH1 Authors: Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A. Deposit date: 2018-08-09 Release date: 2019-02-27 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (3 Å) Cite: Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2. Mol.Cell, 74, 2019
6HB1	Structure of Hgh1, crystal form I Descriptor: CHLORIDE ION, Protein HGH1 Authors: Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A. Deposit date: 2018-08-09 Release date: 2019-02-27 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2. Mol.Cell, 74, 2019
6HB2	Structure of Hgh1, crystal form I, Selenomethionine derivative Descriptor: CHLORIDE ION, Protein HGH1 Authors: Moenkemeyer, L, Klaips, C.L, Balchin, D, Koerner, R, Hartl, F.U, Bracher, A. Deposit date: 2018-08-09 Release date: 2019-02-27 Last modified: 2019-04-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Chaperone Function of Hgh1 in the Biogenesis of Eukaryotic Elongation Factor 2. Mol.Cell, 74, 2019
3J9V	Yeast V-ATPase state 3 Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ... Authors: Zhao, J, Benlekbir, S, Rubinstein, J.L. Deposit date: 2015-02-23 Release date: 2015-05-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (8.3 Å) Cite: Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. Nature, 521, 2015
3J9U	Yeast V-ATPase state 2 Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ... Authors: Zhao, J, Benlekbir, S, Rubinstein, J.L. Deposit date: 2015-02-23 Release date: 2015-05-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.6 Å) Cite: Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. Nature, 521, 2015
3J9T	Yeast V-ATPase state 1 Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ... Authors: Zhao, J, Benlekbir, S, Rubinstein, J.L. Deposit date: 2015-02-23 Release date: 2015-05-13 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.9 Å) Cite: Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase. Nature, 521, 2015
4YNW	Assembly Chaperone of RpL4 (Acl4) (Residues 1-338) Descriptor: ACL4 Authors: Huber, F.M, Hoelz, A. Deposit date: 2015-03-11 Release date: 2015-05-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Coordinated Ribosomal L4 Protein Assembly into the Pre-Ribosome Is Regulated by Its Eukaryote-Specific Extension. Mol.Cell, 58, 2015
4YNV	Assembly Chaperone of RpL4 (Acl4) (Residues 28-338) Descriptor: ACL4 Authors: Huber, F.M, Hoelz, A. Deposit date: 2015-03-11 Release date: 2015-05-13 Last modified: 2020-04-15 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Coordinated Ribosomal L4 Protein Assembly into the Pre-Ribosome Is Regulated by Its Eukaryote-Specific Extension. Mol.Cell, 58, 2015
6KC0	fused To-MtbCsm1 with 2ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A),CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), MAGNESIUM ION Authors: Li, T, Huo, Y, Jiang, T. Deposit date: 2019-06-26 Release date: 2020-07-01 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.295 Å) Cite: Mycobacterium tuberculosis CRISPR/Cas system Csm1 holds clues to the evolutionary relationship between DNA polymerase and cyclase activity. Int.J.Biol.Macromol., 170, 2020
3V86	Computational Design of a Protein Crystal Descriptor: De novo design helix Authors: Acharya, R, North, B, Saven, J, DeGrado, W. Deposit date: 2011-12-22 Release date: 2012-05-09 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Computational design of a protein crystal. Proc.Natl.Acad.Sci.USA, 109, 2012
4I99	Crystal structure of the SmcHead bound to the C-winged helix domain of ScpA Descriptor: Chromosome partition protein Smc, PHOSPHATE ION, Putative uncharacterized protein Authors: Shin, H.C, Soh, Y.M, Oh, B.H. Deposit date: 2012-12-05 Release date: 2013-01-30 Last modified: 2017-08-23 Method: X-RAY DIFFRACTION (2.3 Å) Cite: An asymmetric SMC-kleisin bridge in prokaryotic condensin. Nat.Struct.Mol.Biol., 20, 2013
4NCL	Crystal structure of eukaryotic translation initiation factor eIF5B (517-970) from Chaetomium thermophilum in complex with GDP Descriptor: Eukaryotic translation initiation factor 5B-like protein, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Kuhle, B, Ficner, R. Deposit date: 2013-10-24 Release date: 2014-07-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.115 Å) Cite: eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4I98	Crystal structure of the complex between ScpA(residues 1-160)-ScpB(residues 1-183) Descriptor: Segregation and condensation protein A, Segregation and condensation protein B Authors: Shin, H.C, Oh, B.H. Deposit date: 2012-12-05 Release date: 2013-01-30 Last modified: 2014-12-17 Method: X-RAY DIFFRACTION (2.8 Å) Cite: An asymmetric SMC-kleisin bridge in prokaryotic condensin Nat.Struct.Mol.Biol., 20, 2013
3JPT	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro chloro methylene triphosphate Descriptor: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPO	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochloromethylene triphosphate Descriptor: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPQ	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monoBromo methylene triphosphate Descriptor: 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPN	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dichloro methylene triphosphate Descriptor: 2'-deoxy-5'-O-[(S)-{[(R)-[dichloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPR	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dimethyl methylene triphosphate Descriptor: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(1-methyl-1-phosphonoethyl)phosphoryl]oxy}phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPS	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro methyl methylene triphosphate Descriptor: 2'-deoxy-5'-O-[(S)-{[(S)-[(1R)-1-fluoro-1-phosphonoethyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010
3JPP	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-MonoMethyl Methylene triphosphate Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy({(S)-hydroxy[(1R)-1-phosphonoethyl]phosphoryl}oxy)phosphoryl]guanosine, 5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3', ... Authors: Batra, V.K, Upton, J, Kashmerov, B, Beard, W.A, Wilson, S.H, Goodman, M.F, McKenna, C.E. Deposit date: 2009-09-04 Release date: 2010-06-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Halogenated beta,gamma-Methylene- and Ethylidene-dGTP-DNA Ternary Complexes with DNA Polymerase beta: Structural Evidence for Stereospecific Binding of the Fluoromethylene Analogues. J.Am.Chem.Soc., 132, 2010

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