Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TRQ
DownloadVisualize
BU of 5trq by Molmil
WELO5 SMALL MOLECULE HALOGENASE WITH NI(II) AND SUCCINATE
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:McDonough, M.A, Gallimore, E, Clifton, I.J.
Deposit date:2016-10-27
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:WELO5 SMALL MOLECULE HALOGENASE WITH NI(II) AND SUCCINATE
To be published
8PA8
DownloadVisualize
BU of 8pa8 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2551
Descriptor: 7-[(1~{S})-1-[4-(3-azanylpropyl)-1,2,3-triazol-1-yl]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2551
To Be Published
6TYK
DownloadVisualize
BU of 6tyk by Molmil
Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
Descriptor: 3-IODO-TYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-09
Release date:2021-04-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Tn IYD bound in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
To Be Published
6QF4
DownloadVisualize
BU of 6qf4 by Molmil
X-Ray structure of human Serine/Threonine Kinase 17B (STK17B) aka DRAK2 in complex with ADP obtained by on-chip soaking
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Lieske, J, Cerv, M, Kreida, S, Barthelmess, M, Fischer, P, Pakendorf, T, Yefanov, O, Mariani, V, Seine, T, Ross, B.H, Crosas, E, Lorbeer, O, Burkhardt, A, Lane, T.J, Guenther, S, Bergtholdt, J, Schoen, S, Tornroth-Horsefield, S, Chapman, H.N, Meents, A.
Deposit date:2019-01-09
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:On-chip crystallization for serial crystallography experiments and on-chip ligand-binding studies.
Iucrj, 6, 2019
5DMY
DownloadVisualize
BU of 5dmy by Molmil
Beta-galactosidase - construct 33-930
Descriptor: 1,2-ETHANEDIOL, Beta-galactosidase, MAGNESIUM ION, ...
Authors:Watson, K.A, Lazidou, A.
Deposit date:2015-09-09
Release date:2016-10-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rational protein engineering toward the development of a beta-galactosidase with improved functional properties
To Be Published
6UMB
DownloadVisualize
BU of 6umb by Molmil
Crystal structure of TRIM7 B30.2 domain at 1.8 angstrom resolution
Descriptor: BETA-MERCAPTOETHANOL, E3 ubiquitin-protein ligase TRIM7, MALONATE ION
Authors:Munoz Sosa, C.J, Carrizo, M.E.
Deposit date:2019-10-09
Release date:2021-04-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and mutational analysis of the human TRIM7 B30.2 domain provide insights into the molecular basis of its binding to glycogenin-1.
J.Biol.Chem., 296, 2021
6TWN
DownloadVisualize
BU of 6twn by Molmil
Crystal structure of Talin1 R7R8 in complex with CDK1 (206-223)
Descriptor: CHLORIDE ION, Cyclin-dependent kinase 1, GLYCEROL, ...
Authors:Zacharchenko, T, Muench, S.P, Goult, B.T.
Deposit date:2020-01-13
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Talin mechanosensitivity is modulated by a direct interaction with cyclin-dependent kinase-1.
J.Biol.Chem., 297, 2021
5M2S
DownloadVisualize
BU of 5m2s by Molmil
R. flavefaciens' third ScaB cohesin in complex with a group 1 dockerin
Descriptor: CALCIUM ION, Doc8: Type I dockerin repeat domain from family 9 glycoside hydrolase WP_009982745[Ruminococcus flavefaciens], GLYCEROL, ...
Authors:Bule, P, Najmudin, S, Carvalho, A.L, Fontes, C.M.G.A.
Deposit date:2016-10-13
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Assembly of Ruminococcus flavefaciens cellulosome revealed by structures of two cohesin-dockerin complexes.
Sci Rep, 7, 2017
8P7E
DownloadVisualize
BU of 8p7e by Molmil
Crystal structure of the lipase SpL from Sphingomonas sp. HXN-200 in complex with benzylamine
Descriptor: BENZYLAMINE, Lipase
Authors:Mokos, D, Gruber, K, Daniel, B.
Deposit date:2023-05-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Amide formation of (hetero)aromatic esters and primary amines in buffer catalyzed by serine hydrolases: An Asp next to Ser of the catalytic triad of serine hydrolases is crucial for activity
To Be Published
6XH3
DownloadVisualize
BU of 6xh3 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.3
Descriptor: TAR BINDING PROTEIN TBP 6.3, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
8P92
DownloadVisualize
BU of 8p92 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2117
Descriptor: 3-[(1~{S})-1-phenylethoxy]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-05
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2117
To Be Published
5IFM
DownloadVisualize
BU of 5ifm by Molmil
Human NONO (p54nrb) Homodimer
Descriptor: CHLORIDE ION, GLYCEROL, Non-POU domain-containing octamer-binding protein, ...
Authors:Knott, G.J, Bond, C.S.
Deposit date:2016-02-26
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A crystallographic study of human NONO (p54(nrb)): overcoming pathological problems with purification, data collection and noncrystallographic symmetry.
Acta Crystallogr D Struct Biol, 72, 2016
8P9P
DownloadVisualize
BU of 8p9p by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2408
Descriptor: 3-(2-ethoxy-5-fluoranyl-pyridin-3-yl)-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-06
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2408
To Be Published
8PAO
DownloadVisualize
BU of 8pao by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2654
Descriptor: 7-[(1~{S})-1-[4-[(2-azanylethylsulfonylamino)methyl]-1,2,3-triazol-1-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-08
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2654
To Be Published
6M36
DownloadVisualize
BU of 6m36 by Molmil
The crystal structure of B. subtilis RsbV/RsbW complex in the monoclinic crystal form
Descriptor: Anti-sigma-B factor antagonist, Serine-protein kinase RsbW
Authors:Pathak, D, Kwon, E, Kim, D.Y.
Deposit date:2020-03-02
Release date:2020-07-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insights into the regulation of SigB activity by RsbV and RsbW.
Iucrj, 7, 2020
5TW8
DownloadVisualize
BU of 5tw8 by Molmil
Crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4) in complex with ceftaroline
Descriptor: Ceftaroline, bound form, Penicillin-binding protein 4, ...
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2016-11-11
Release date:2018-05-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural and kinetic analysis of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 2018
6XY1
DownloadVisualize
BU of 6xy1 by Molmil
Crystal structure of a de novo designed parallel four-helix coiled coil, 4-KE-4.
Descriptor: 4-KE-4
Authors:Edgell, C.L, Savery, N.J, Woolfson, D.N.
Deposit date:2020-01-29
Release date:2020-03-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:RobustDe Novo-Designed Homotetrameric Coiled Coils.
Biochemistry, 59, 2020
6M44
DownloadVisualize
BU of 6m44 by Molmil
355 bp di-nucleosome harboring cohesive DNA termini (high cryoprotectant)
Descriptor: CALCIUM ION, DNA (355-MER), Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2020-03-05
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
6XYA
DownloadVisualize
BU of 6xya by Molmil
Cap-binding domain of SFTSV L protein
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase, SODIUM ION
Authors:Gogrefe, N, Guenther, S, Rosenthal, M.
Deposit date:2020-01-30
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 48, 2020
6QGM
DownloadVisualize
BU of 6qgm by Molmil
VirX1 apo structure
Descriptor: VirX1
Authors:Gkotsi, D.S, Ludewig, H, Sharma, S.V, Unsworth, W.P, Taylor, R.J.K, McLachlan, M.M.W, Shanahan, S, Naismith, J.H, Goss, R.J.M.
Deposit date:2019-01-11
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A marine viral halogenase that iodinates diverse substrates.
Nat.Chem., 11, 2019
6QHC
DownloadVisualize
BU of 6qhc by Molmil
Crystal Structure of Human Kallikrein 6 in complex with GSK358180B
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, Kallikrein-6, ...
Authors:Thorpe, J.H.
Deposit date:2019-01-16
Release date:2019-02-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Kallikrein 5 inhibitors identified through structure based drug design in search for a treatment for Netherton Syndrome.
Bioorg. Med. Chem. Lett., 29, 2019
8PA2
DownloadVisualize
BU of 8pa2 by Molmil
Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
To Be Published
6QH3
DownloadVisualize
BU of 6qh3 by Molmil
Catalytic domain of the human ubiquitin-conjugating enzyme UBE2S C118M
Descriptor: 1,2-ETHANEDIOL, Ubiquitin-conjugating enzyme E2 S
Authors:Liess, A.K.L, Lorenz, S.
Deposit date:2019-01-15
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Autoinhibition Mechanism of the Ubiquitin-Conjugating Enzyme UBE2S by Autoubiquitination.
Structure, 27, 2019
5M0T
DownloadVisualize
BU of 5m0t by Molmil
Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH, FE (II) ION, ...
Authors:Jakubczyk, D, Caputi, L, Stevenson, C.E.M, Lawson, D.M, O'Connor, S.E.
Deposit date:2016-10-05
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of EasH (Aspergillus japonicus) - an oxidase involved in cycloclavine biosynthesis.
Chem. Commun. (Camb.), 52, 2016
6XZE
DownloadVisualize
BU of 6xze by Molmil
crystal structure of human carbonic anhydrase I in complex with 4-(3-(2-((2-fluorobenzyl)amino)ethyl)ureido) benzenesulfonamide
Descriptor: 1-[2-[(2-fluorophenyl)methylamino]ethyl]-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, ZINC ION
Authors:Zanotti, G, Majid, A, Bozdag, M, Angeli, A, Carta, F, Berto, P, Supuran, C.
Deposit date:2020-02-04
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Benzylaminoethyureido-Tailed Benzenesulfonamides: Design, Synthesis, Kinetic and X-ray Investigations on Human Carbonic Anhydrases.
Int J Mol Sci, 21, 2020

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon