Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3DQH
DownloadVisualize
BU of 3dqh by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
7Q1N
DownloadVisualize
BU of 7q1n by Molmil
Crystal structure of human butyrylcholinesterase in complex with N-[(2R)-3-[(cyclohexylmethyl)amino]-2-hydroxypropyl]-2,2-diphenylacetamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Brazzolotto, X, Panek, D, Pasieka, A, Malawska, B, Nachon, F.
Deposit date:2021-10-20
Release date:2022-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of new, highly potent and selective inhibitors of BuChE - design, synthesis, in vitro and in vivo evaluation and crystallography studies.
Eur.J.Med.Chem., 249, 2023
3DRJ
DownloadVisualize
BU of 3drj by Molmil
Crystal structure of Lactococcal OppA co-crystallized with pTH-related peptide in an open conformation
Descriptor: Oligopeptide-binding protein oppA, pTH-related peptide
Authors:Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
Deposit date:2008-07-11
Release date:2009-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
5HZ4
DownloadVisualize
BU of 5hz4 by Molmil
The structural and biochemical characterization of acyl-coa hydrolase mutant Thr60Ala from Staphylococcus aureus.
Descriptor: Thioesterase
Authors:Khandokar, Y.B, Srivastava, P, Forwood, J.K.
Deposit date:2016-02-02
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structural and biochemical characterization of acyl-coa hydrolase mutant Thr60Ala from Staphylococcus aureus.
To Be Published
6VV8
DownloadVisualize
BU of 6vv8 by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB285
Descriptor: 5-{[3-(1H-indol-3-yl)propanoyl]amino}-1-phenyl-1H-pyrazole-4-carboxylic acid, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Chavez-Pacheco, S.M, Dias, M.V.B.
Deposit date:2020-02-17
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.683 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
2N4Q
DownloadVisualize
BU of 2n4q by Molmil
Solution NMR structure of CBX8 in complex with AF9 (CBX8-AF9)
Descriptor: Chromobox protein homolog 8, Protein AF-9
Authors:Kuntimaddi, A, Leach, B.I, Bushweller, J.H.
Deposit date:2015-06-30
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of CBX8 in complex with AF9 (CBX8-AF9)
To be Published
5HS1
DownloadVisualize
BU of 5hs1 by Molmil
Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) complexed with Voriconazole
Descriptor: Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE, Voriconazole
Authors:Sabherwal, M, Sagatova, A, Keniya, M.V, Wilson, R.K, Tyndall, J.D.A, Monk, B.C.
Deposit date:2016-01-24
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Triazole resistance mediated by mutations of a conserved active site tyrosine in fungal lanosterol 14 alpha-demethylase.
Sci Rep, 6, 2016
7Q1P
DownloadVisualize
BU of 7q1p by Molmil
Crystal structure of human butyrylcholinesterase in complex with N-[(2R)-3-[(cyclohexylmethyl)amino]-2-hydroxypropyl]-3,3-diphenylpropanamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Brazzolotto, X, Panek, D, Pasieka, A, Malawska, B, Nachon, F.
Deposit date:2021-10-20
Release date:2022-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of new, highly potent and selective inhibitors of BuChE - design, synthesis, in vitro and in vivo evaluation and crystallography studies.
Eur.J.Med.Chem., 249, 2023
2N7L
DownloadVisualize
BU of 2n7l by Molmil
NMR structure of the N-domain of troponin C bound to the switch region of troponin I and the covalent levosimendan analog i9
Descriptor: CALCIUM ION, Troponin C/Troponin I chimera
Authors:Pineda Sanabria, S.E, Sykes, B.D, Robertson, I.M.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Troponin C with covalently bound levosimendan analog i9 enhances contraction in cardiac muscle fibers
To be Published
3DK5
DownloadVisualize
BU of 3dk5 by Molmil
Crystal Structure of Apo-GlmU from Mycobacterium tuberculosis
Descriptor: Bifunctional protein glmU, MAGNESIUM ION
Authors:Verma, S.K, Prakash, B.
Deposit date:2008-06-24
Release date:2009-05-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:PknB-mediated phosphorylation of a novel substrate, N-acetylglucosamine-1-phosphate uridyltransferase, modulates its acetyltransferase activity.
J.Mol.Biol., 386, 2009
6VMC
DownloadVisualize
BU of 6vmc by Molmil
T4H2 T cell receptor bound to HLA-A2 presenting gp100T2L peptide (ILDQVPFSV)
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Smith, A.R, Baker, B.M.
Deposit date:2020-01-27
Release date:2021-01-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structurally silent peptide anchor modifications allosterically modulate T cell recognition in a receptor-dependent manner
Proc.Natl.Acad.Sci.USA, 118, 2021
7EL4
DownloadVisualize
BU of 7el4 by Molmil
The crystal structure of p53p peptide fragment in complex with the N-terminal domain of MdmX
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Cellular tumor antigen p53,Protein Mdm4, MAGNESIUM ION
Authors:Cheng, X.Y, Zhang, B.L, Li, Z.C, Kuang, Z.K, Su, Z.D.
Deposit date:2021-04-08
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The crystal structure of the N-terminal domain of MdmX in complex with p53p peptide fragment
To Be Published
6YIP
DownloadVisualize
BU of 6yip by Molmil
Structure of MKLP2 coiled coil
Descriptor: ISOPROPYL ALCOHOL, Kinesin-like protein KIF20A
Authors:Serena, M, Elliott, P.R, Barr, F.A.
Deposit date:2020-04-01
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Molecular basis of MKLP2-dependent Aurora B transport from chromatin to the anaphase central spindle.
J.Cell Biol., 219, 2020
3DN4
DownloadVisualize
BU of 3dn4 by Molmil
Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 2-HYDROXYETHYL DISULFIDE, Lysozyme, PHOSPHATE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
4TWK
DownloadVisualize
BU of 4twk by Molmil
Crystal structure of human two pore domain potassium ion channel TREK1 (K2P2.1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Octyl Glucose Neopentyl Glycol, ...
Authors:Pike, A.C.W, Dong, Y.Y, Tessitore, A, Goubin, S, Strain-Damerell, C, Mukhopadhyay, S, Kupinska, K, Wang, D, Chalk, R, Berridge, G, Grieben, M, Shrestha, L, Ang, J.H, Mackenzie, A, Quigley, A, Bushell, S.R, Shintre, C.A, Faust, B, Chu, A, Dong, L, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Burgess-Brown, N.A, Carpenter, E.P.
Deposit date:2014-06-30
Release date:2014-08-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human two pore domain potassium ion channel TREK1 (K2P2.1)
To Be Published
4IT8
DownloadVisualize
BU of 4it8 by Molmil
A sperm whale myoglobin mutant L29H Mb with two distal histidines
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.-W, Tan, X.-S, Li, W, Sun, M.-H, Wen, G.-B, Liu, J.-H.
Deposit date:2013-01-18
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and nitrite reductase activity comparisons of myoglobins with one to three distal histidines.
RSC Adv, 2013
5NFW
DownloadVisualize
BU of 5nfw by Molmil
Neutron structure of human transthyretin (TTR) S52P mutant at room temperature to 1.8A resolution (quasi-Laue)
Descriptor: Transthyretin
Authors:Yee, A.W, Moulin, M, Blakeley, M.P, Cooper, J.B, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
Deposit date:2017-03-16
Release date:2019-01-02
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION
Cite:A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
7Q1O
DownloadVisualize
BU of 7q1o by Molmil
Crystal structure of human butyrylcholinesterase in complex with N-[(2S)-3-[(cyclohexylmethyl)amino]-2-hydroxypropyl]-3,3-diphenylpropanamide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Brazzolotto, X, Panek, D, Pasieka, A, Malawska, B, Nachon, F.
Deposit date:2021-10-20
Release date:2022-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of new, highly potent and selective inhibitors of BuChE - design, synthesis, in vitro and in vivo evaluation and crystallography studies.
Eur.J.Med.Chem., 249, 2023
8CI9
DownloadVisualize
BU of 8ci9 by Molmil
Deoxypodophyllotoxin Synthase in complex with Tris
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxypodophyllotoxin synthase, FE (III) ION
Authors:Ingold, Z, Lichman, B, Grogan, G.
Deposit date:2023-02-09
Release date:2023-06-14
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structure and mutation of deoxypodophyllotoxin synthase (DPS) from Podophyllum hexandrum
Front Catal, 3, 2023
4IU5
DownloadVisualize
BU of 4iu5 by Molmil
Crystal structure of Leishmania mexicana arginase in complex with catalytic product L-ornithine
Descriptor: Arginase, GLYCEROL, L-ornithine, ...
Authors:D'Antonio, E.L, Ullman, B, Roberts, S.C, Gaur Dixit, U, Wilson, M.E, Hai, Y, Christianson, D.W.
Deposit date:2013-01-19
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of arginase from Leishmania mexicana and implications for the inhibition of polyamine biosynthesis in parasitic infections.
Arch.Biochem.Biophys., 535, 2013
7E9H
DownloadVisualize
BU of 7e9h by Molmil
Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu4
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-3, ...
Authors:Lin, S, Han, S, Zhao, Q, Wu, B.
Deposit date:2021-03-04
Release date:2021-06-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of G i -bound metabotropic glutamate receptors mGlu2 and mGlu4.
Nature, 594, 2021
6ST8
DownloadVisualize
BU of 6st8 by Molmil
Crystal structure of the strawberry pathogenesis-related 10 (PR-10) Fra a 1.02 protein
Descriptor: Major strawberry allergen Fra a 1-2
Authors:Orozco-Navarrete, B, Kaczmarska, Z, Dupeux, F, Pott, D, Diaz Perales, A, Casanal, A, Marquez, J.A, Valpuesta, V, Merchante, C.
Deposit date:2019-09-10
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Bases for the Allergenicity of Fra a 1.02 in Strawberry Fruits.
J.Agric.Food Chem., 68, 2020
6VIU
DownloadVisualize
BU of 6viu by Molmil
HLA-B*15:02 complexed with a synthetic peptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Beta-2-microglobulin, ...
Authors:Schutte, R.J, Li, D, Ostrov, D.A.
Deposit date:2020-01-14
Release date:2020-11-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:HLA-B*15:02 complexed with a synthetic peptide
To Be Published
4J65
DownloadVisualize
BU of 4j65 by Molmil
Crystal structure of Ribonuclease A soaked in 40% Dimethylformamide: One of twelve in MSCS set
Descriptor: DIMETHYLFORMAMIDE, Ribonuclease pancreatic, SULFATE ION
Authors:Kearney, B.M, Dechene, M, Swartz, P.D, Mattos, C.
Deposit date:2013-02-11
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.958 Å)
Cite:DRoP: A program for analysis of water structure on protein surfaces
to be published
1SBM
DownloadVisualize
BU of 1sbm by Molmil
Crystal Structure of Reduced Mesopone cytochrome c peroxidase (R-isomer)
Descriptor: Cytochrome c peroxidase, mitochondrial, FE-(4-MESOPORPHYRINONE)-R-ISOMER
Authors:Bhaskar, B, Immoos, C.E, Sulc, F, Cohen, M.S, Farmer, P.J, Poulos, T.L.
Deposit date:2004-02-10
Release date:2005-06-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal Structures of Resting (Fe3+), Reduced (Fe2+) and Reduced-NO adduct of Mesopone cytochrome c peroxidase (MpCcP) - R-isomer
To be Published

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon