Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9EPL
DownloadVisualize
BU of 9epl by Molmil
Mpro from SARS-CoV-2 with 298Q mutation
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Non-structural protein 11, ...
Authors:Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
Deposit date:2024-03-18
Release date:2024-04-17
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EP9
DownloadVisualize
BU of 9ep9 by Molmil
NMR solution structure of lipid transfer protei Sola l7 from tomato seeds
Descriptor: Non-specific lipid-transfer protein
Authors:Parron-Ballesteros, J, Mantin-Pedraz, L, G.Gordo, R, Mayorga, C, Villaba, M, Batanero, E, Pantoja-Uceda, D, Turnay, J.
Deposit date:2024-03-18
Release date:2024-09-04
Method:SOLUTION NMR
Cite:Long-chain fatty acids block allergic reaction against lipid transfer protein Sola l 7 from tomato seeds.
Protein Sci., 33, 2024
9EOX
DownloadVisualize
BU of 9eox by Molmil
SARS-CoV2 major protease in covalent complex with a soluble inhibitor.
Descriptor: 3C-like proteinase nsp5, POTASSIUM ION, Soluble inhibitor
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-15
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 2024
9EOR
DownloadVisualize
BU of 9eor by Molmil
SARS-CoV2 major protease in complex with a covalent inhibitor SLL12.
Descriptor: 3C-like proteinase nsp5, Inhibitor SLL12, POTASSIUM ION
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-15
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 2024
9EO8
DownloadVisualize
BU of 9eo8 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure D)
Descriptor: AMMONIA, CHLORIDE ION, PLATINUM (II) ION, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO6
DownloadVisualize
BU of 9eo6 by Molmil
SARS-CoV2 major protease in complex with a covalent inhibitor SLL11.
Descriptor: 3C-like proteinase nsp5, Inhibitor SLL11, POTASSIUM ION
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-14
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 2024
9EO5
DownloadVisualize
BU of 9eo5 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure C)
Descriptor: AMMONIA, PLATINUM (II) ION, Ribonuclease pancreatic
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9EO2
DownloadVisualize
BU of 9eo2 by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure B)
Descriptor: ACETATE ION, GLYCEROL, Lysozyme C, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9ENZ
DownloadVisualize
BU of 9enz by Molmil
X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure A)
Descriptor: ACETATE ION, AMMONIA, Lysozyme C, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2024-03-14
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Picoplatin binding to proteins: X-ray structures and mass spectrometry data on the adducts with lysozyme and ribonuclease A.
Dalton Trans, 53, 2024
9ENN
DownloadVisualize
BU of 9enn by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with N-epsilon-acetyl-L-lysine
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, L-amino acid oxidase 4, N(6)-ACETYLLYSINE, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 2024
9ENK
DownloadVisualize
BU of 9enk by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-phenylalanine
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, L-amino acid oxidase 4, PHENYLALANINE, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 2024
9ENJ
DownloadVisualize
BU of 9enj by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamate
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLUTAMIC ACID, L-amino acid oxidase 4, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 2024
9ENI
DownloadVisualize
BU of 9eni by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamine
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLUTAMINE, L-amino acid oxidase 4, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 2024
9ENH
DownloadVisualize
BU of 9enh by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-amino acid oxidase 4, S-1,2-PROPANEDIOL, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 2024
9EN6
DownloadVisualize
BU of 9en6 by Molmil
Crystal structure of RNA G2C4 repeats - native model pH 6.5
Descriptor: MAGNESIUM ION, RNA (5'-R(*GP*GP*CP*CP*CP*C)-3')
Authors:Mateja-Pluta, M, Kiliszek, A.
Deposit date:2024-03-12
Release date:2024-05-01
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (0.918 Å)
Cite:Antisense RNA C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms a triplex-like structure and binds small synthetic ligand.
Nucleic Acids Res., 52, 2024
9EN2
DownloadVisualize
BU of 9en2 by Molmil
Crystal structure of the metalloproteinase enhancer PCPE-1 complexed with nanobodies VHH-H4 and VHH-I5
Descriptor: CALCIUM ION, GLYCEROL, Procollagen C-endopeptidase enhancer 1, ...
Authors:Lagoutte, P, Gueguen-Chaignon, V, Bourhis, J.-M, Vadon-Le Goff, S.
Deposit date:2024-03-12
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mono- and Bi-specific Nanobodies Targeting the CUB Domains of PCPE-1 Reduce the Proteolytic Processing of Fibrillar Procollagens.
J.Mol.Biol., 436, 2024
9EMU
DownloadVisualize
BU of 9emu by Molmil
RosC-8-demethyl-8-amino-FMN - Phosphate complex
Descriptor: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, GLYCEROL, PHOSPHATE ION, ...
Authors:Ermler, U, Mack, M, Demmer, U.
Deposit date:2024-03-11
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Phosphatase RosC from Streptomyces davaonensis is Used for Roseoflavin Biosynthesis and has Evolved to Largely Prevent Dephosphorylation of the Important Cofactor Riboflavin-5'-phosphate.
J.Mol.Biol., 436, 2024
9EM1
DownloadVisualize
BU of 9em1 by Molmil
Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone and phosphate
Descriptor: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, Chronophin, GLYCEROL, ...
Authors:Brenner, M, Gohla, A, Schindelin, H.
Deposit date:2024-03-07
Release date:2024-06-12
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase.
Elife, 13, 2024
9DNA
DownloadVisualize
BU of 9dna by Molmil
CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC)
Descriptor: DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3')
Authors:Heinemann, U.
Deposit date:1987-07-10
Release date:1988-01-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC).
Nucleic Acids Res., 15, 1987
9DCG
DownloadVisualize
BU of 9dcg by Molmil
Crystal Structure of the Thiol:Disulfide Interchange Protein DsbC from Vibrio cholerae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Kim, Y, Maltseva, N, Shatsman, S, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-08-26
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of the Thiol:Disulfide Interchange Protein DsbC from Vibrio cholerae
To Be Published
9D6M
DownloadVisualize
BU of 9d6m by Molmil
Nitrile hydratase BR157K mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-15
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
9D6J
DownloadVisualize
BU of 9d6j by Molmil
Nitrile hydratase BR52K mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-15
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
9D65
DownloadVisualize
BU of 9d65 by Molmil
Nitrile hydratase BR52A mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-14
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
9D5W
DownloadVisualize
BU of 9d5w by Molmil
Crystal Structure of the Substrate Binding Domain Protein of the ABC Transporter PBP2_YxeM from Vibrio cholerae
Descriptor: Amino acid ABC transporter, periplasmic amino acid-binding portion, CHLORIDE ION, ...
Authors:Kim, Y, Maltseva, N, Grimshaw, S, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-08-14
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Substrate Binding Domain Protein of the ABC Transporter PBP2_YxeM from Vibrio cholerae
To Be Published
9D5D
DownloadVisualize
BU of 9d5d by Molmil
Crystal Structure of Blood Coagulation Factor VIII C2 Domain Mutant L2251A/L2252A
Descriptor: Factor VIIIa light chain
Authors:Avery, N.G, Childers, K.C, Spiegel, P.C.
Deposit date:2024-08-13
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Biophysical characterization of blood coagulation factor VIII binding to lipid nanodiscs that mimic activated platelet surfaces
To Be Published

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon