Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4JZ7
DownloadVisualize
BU of 4jz7 by Molmil
Carbamate kinase from Giardia lamblia bound to AMP-PNP
Descriptor: Carbamate kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
3KCC
DownloadVisualize
BU of 3kcc by Molmil
Crystal structure of D138L mutant of Catabolite Gene Activator Protein
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Tao, W.B, Gao, Z.Q, Zhou, J.H, Dong, Y.H, Yu, S.N.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:The 1.6A resolution structure of activated D138L mutant of catabolite gene activator protein with two cAMP bound in each monomer
Int.J.Biol.Macromol., 48, 2011
3MZH
DownloadVisualize
BU of 3mzh by Molmil
Crystal structure of cAMP receptor protein from mycobacterium tuberculosis in complex with cAMP and its DNA binding element
Descriptor: 5'-D(P*AP*AP*AP*TP*GP*TP*GP*AP*TP*CP*TP*AP*GP*GP*TP*CP*AP*CP*GP*TP*G)-3', 5'-D(P*CP*AP*CP*GP*TP*GP*AP*CP*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*C)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Akhter, Y, Wilmanns, M.
Deposit date:2010-05-12
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Camp Receptor Protein from Mycobacterium Tuberculosis in Complex with DNA and cAMP
To be Published
7OBJ
DownloadVisualize
BU of 7obj by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with cyclic di-AMP (c-di-AMP)
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Membrane-associated protein slr1513
Authors:Selim, K.A, Albrecht, R, Hartmann, M.D.
Deposit date:2021-04-22
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diurnal metabolic control in cyanobacteria requires perception of second messenger signaling molecule c-di-AMP by the carbon control protein SbtB.
Sci Adv, 7, 2021
4LEW
DownloadVisualize
BU of 4lew by Molmil
Structure of human cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Li, P.
Deposit date:2013-06-26
Release date:2013-12-25
Last modified:2014-01-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization.
Immunity, 39, 2013
4F2L
DownloadVisualize
BU of 4f2l by Molmil
Structure of a regulatory domain of AMPK
Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-1, MAGNESIUM ION
Authors:Xin, F.J, Zhang, Y.Y, Wang, J, Wang, Z.X, Wu, J.W.
Deposit date:2012-05-08
Release date:2013-06-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved regulatory elements in AMPK
Nature, 498, 2013
7XQ2
DownloadVisualize
BU of 7xq2 by Molmil
Structure of hSLC19A1+2'3'-cGAMP
Descriptor: Reduced folate transporter, cGAMP
Authors:Zhang, Q.X, Zhang, X.Y, Zhu, Y.L, Sun, P.P, Gao, A, Zhang, L.G, Gao, P.
Deposit date:2022-05-06
Release date:2022-10-05
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Recognition of cyclic dinucleotides and folates by human SLC19A1.
Nature, 612, 2022
3S1Y
DownloadVisualize
BU of 3s1y by Molmil
AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA) in complex with a beta-lactamase inhibitor
Descriptor: Beta-lactamase, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
Authors:Scapin, G, Lu, J, Fitzgerald, P.M.D, Sharma, N.
Deposit date:2011-05-16
Release date:2011-06-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Side chain SAR of bicyclic Beta-lactamase inhibitors (BLIs). 2. N-Alkylated and open chain analogs of MK-8712
Bioorg.Med.Chem.Lett., 21, 2011
4O81
DownloadVisualize
BU of 4o81 by Molmil
SAICAR synthetase (Type-1) in complex with ADP AND AMP
Descriptor: 1,4-BUTANEDIOL, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Manjunath, K, Jeyakanthan, J, Sekar, K.
Deposit date:2013-12-26
Release date:2014-12-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SAICAR synthetase (Type-1) in complex with ADP AND AMP
To be Published
6YX5
DownloadVisualize
BU of 6yx5 by Molmil
Structure of DrrA from Legionella pneumophilia in complex with human Rab8a
Descriptor: MAGNESIUM ION, Multifunctional virulence effector protein DrrA, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Schneider, S, Du, J, von Wrisberg, M.K, Lang, K, Itzen, A.
Deposit date:2020-04-30
Release date:2020-12-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Rab1-AMPylation by Legionella DrrA is allosterically activated by Rab1.
Nat Commun, 12, 2021
7OLH
DownloadVisualize
BU of 7olh by Molmil
Bacillus subtilis Complex structure 1 of diadenylate cyclase CdaA cytoplasmic domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)
Descriptor: Cyclic di-AMP synthase CdaA, Phosphoglucosamine mutase
Authors:Pathania, M, Grundling, A.G, Freemont, P.
Deposit date:2021-05-20
Release date:2021-10-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
4K96
DownloadVisualize
BU of 4k96 by Molmil
Structure of Binary Complex of cGAS with Bound dsDNA
Descriptor: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.084 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4K98
DownloadVisualize
BU of 4k98 by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
Descriptor: Cyclic GMP-AMP synthase, DNA-F, DNA-R, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4K99
DownloadVisualize
BU of 4k99 by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppdG(2 ,5 )pdG
Descriptor: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, 3'-deoxy-guanosine 5'-monophosphate, Cyclic GMP-AMP synthase, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4LEV
DownloadVisualize
BU of 4lev by Molmil
Structure of human cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Li, P.
Deposit date:2013-06-26
Release date:2013-12-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization.
Immunity, 39, 2013
4K97
DownloadVisualize
BU of 4k97 by Molmil
Structure of Ternary Complex of cGAS with dsDNA and Bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, DNA-F, ...
Authors:Gao, P, Wu, Y, Patel, D.J.
Deposit date:2013-04-19
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase.
Cell(Cambridge,Mass.), 153, 2013
4LEY
DownloadVisualize
BU of 4ley by Molmil
Structure of mouse cGAS bound to 18 bp DNA
Descriptor: 18 bp dsDNA, Cyclic GMP-AMP synthase, ZINC ION
Authors:Li, P.
Deposit date:2013-06-26
Release date:2013-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cyclic GMP-AMP Synthase Is Activated by Double-Stranded DNA-Induced Oligomerization.
Immunity, 39, 2013
3TJ7
DownloadVisualize
BU of 3tj7 by Molmil
GBAA_1210 protein, a putative adenylate cyclase, from Bacillus anthracis in complex with AMP
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, GBAA_1210 protein, ...
Authors:Osipiuk, J, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-08-23
Release date:2011-08-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:GBAA_1210 protein, a putative adenylate cyclase, from Bacillus anthracis in complex with AMP
To be Published
6WT7
DownloadVisualize
BU of 6wt7 by Molmil
Structure of a metazoan TIR-STING receptor from C. gigas in complex with 2',3'-cGAMP
Descriptor: Metazoan TIR-STING fusion, cGAMP
Authors:Morehouse, B.R, Govande, A.A, Millman, A, Keszei, A.F.A, Lowey, B, Ofir, G, Shao, S, Sorek, R, Kranzusch, P.J.
Deposit date:2020-05-01
Release date:2020-09-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:STING cyclic dinucleotide sensing originated in bacteria.
Nature, 586, 2020
3SQW
DownloadVisualize
BU of 3sqw by Molmil
Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
5V0I
DownloadVisualize
BU of 5v0i by Molmil
Crystal Structure of Tryptophanyl-tRNA Synthetase from Escherichia coli Complexed with AMP and Tryptophan
Descriptor: ADENOSINE MONOPHOSPHATE, FORMIC ACID, TRYPTOPHAN, ...
Authors:Maltseva, N, Kim, Y, Mulligan, R, Grimshaw, S.G, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-28
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Tryptophanyl-tRNA Synthetase from Escherichia coli Complexed with AMP and Tryptophan
To Be Published
3SQX
DownloadVisualize
BU of 3sqx by Molmil
Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
4GWS
DownloadVisualize
BU of 4gws by Molmil
Crystal Structure of AMP complexes of Porcine Liver Fructose-1,6-bisphosphatase with Filled Central Cavity
Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, Fructose-1,6-bisphosphatase 1, ...
Authors:Gao, Y, Honzatko, R.B.
Deposit date:2012-09-03
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Hydrophobic Central Cavity in Fructose-1,6-bisphosphatase is Essential for the Synergism in AMP/Fructose 2,6-bisphosphate Inhibition
To be Published
4Y5Q
DownloadVisualize
BU of 4y5q by Molmil
Activated Calcium-Dependent Protein Kinase 1 from Cryptosporidium parvum (CpCDPK1) in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, Calmodulin-domain protein kinase 1, ...
Authors:Merritt, E.A, Larson, E.T, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
Deposit date:2015-02-11
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Activated Calcium-Dependent Protein Kinase 1 from Cryptosporidium parvum (CpCDPK1) in complex with AMP
To Be Published
6ZMD
DownloadVisualize
BU of 6zmd by Molmil
Crystal structure of HYPE covalently tethered to BiP bound to AMP-PNP
Descriptor: Endoplasmic reticulum chaperone BiP, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Fauser, J, Gulen, B, Pett, C, Hedberg, C, Itzen, A, Pogenberg, V.
Deposit date:2020-07-02
Release date:2021-04-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Specificity of AMPylation of the human chaperone BiP is mediated by TPR motifs of FICD.
Nat Commun, 12, 2021

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon